Gene

KWMTBOMO06547

Pre Gene Modal

BGIBMGA011829

Annotation

PREDICTED:_mpv17-like_protein_2_[Papilio_polytes]

Location

Bomo_Chr11(-):10215509-10218464      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.232

CDS

ATGCAGGCAATCGGCATCACGTGGAGGAAACTAGCAACAAACATACGTAGTTCAAGTTCGGTAACACGCTTAAAAAAAGCCGTTAAAGTATCTTTCAGTGACAAATATTTGTTTTACACAAATGTGACTATATCTGTAACGTTGTCGTCAGTGGGTGATTTACTTGAACAATGTTATGAGATATCCGTCGGTGAACAGGAAAAGTATGACTTCAAAAGGACTATGCATATGGGGTTCTCTGGAGTTGCTGTGGGTGTTCTGTGCCATCATTGGTACAAAGTTTTAGATAAATTTATTATAGGAAAAACGTACGATATGGTAGCGAAAAAATTGCTATTAGACCAATTAATATTCTCTCCAATTATGATTATAACATTTTTCGGAAGTGTCGCATTGTTCGAAGAGAATCCACTACAGAATTTTAAGGAGGAAGTGAGAAGTAAATTTTTAACGCTATATCGTGCTGAGTGGATGGTCTGGCCGCCAGCGCAGATTATAAATTTCTACTTTCTGCCAACGCGGTATAGAGTTTTATACGACAACACGATCTCATTAGGTTACGATATTTATACATCACAAGTGAAACATAGTAAAGGCTTGAAAAGCTCATCTAAAGATAAAATTATAGGGACCAAATGA

Protein

MQAIGITWRKLATNIRSSSSVTRLKKAVKVSFSDKYLFYTNVTISVTLSSVGDLLEQCYEISVGEQEKYDFKRTMHMGFSGVAVGVLCHHWYKVLDKFIIGKTYDMVAKKLLLDQLIFSPIMIITFFGSVALFEENPLQNFKEEVRSKFLTLYRAEWMVWPPAQIINFYFLPTRYRVLYDNTISLGYDIYTSQVKHSKGLKSSSKDKIIGTK

Similarity

Belongs to the peroxisomal membrane protein PXMP2/4 family.

Uniprot

H9JQM3   A0A194Q1J9   A0A0L7L636   A0A2H1V9P0   A0A2A4JMU7   A0A2W1BTG4   + More
A0A0L7L5Q2   S4NWZ1   H9JQM2   A0A2W1BP53   A0A0C9R5J8   A0A195FHX9   A0A158NDC5   A0A0N1IU85   A0A026WUE7   A0A195DIV4   A0A151XHF0   F4WSP3   A0A1B6DKT7   A0A195C197   A0A0K8TQ51   A0A2M3ZCU8   A0A1I8MDS8   A0A182V318   A0A2M4BZU2   A0A182X9T9   A0A2A3ETK4   A0A0L0CBJ4   A7UVN3   A0A2M4C005   A0A182HKS1   A0A182TVA8   A0A2P8XM98   A0A182P2G5   A0A1I8QEI8   W5JN39   A0A0J7KS97   A0A182F7A0   A0A182ITP7   A0A182SFN5   A0A182JPC2   E9G037   A0A182QUL2   A0A182YGG3   A0A182MLC6   A0A088A5A0   T1DQ11   A0A0P6ANT0   A0A182N5D8   A0A336MDW1   A0A182RNG6   T1HAM2   A0A1L8ECV5   A0A336LZI3   A0A182VR93   W8BPU9   A0A0V0GBS9   E9IVA4   A0A2J7PCZ2   A0A069DPS8   A0A0L7QX96   A0A0K8U5W2   A0A084W579   A0A3B0K0W4   A0A3B0JT73   Q9VYD6   B4Q2B3   B4MEI2   B4R4C3   B4IGS3   A0A2R7WTA0   A0A034W0A6   A0A0C9RHD6   B3NWN9   B4JLQ1   A0A1B0CQT8   A0A067QZD0   A0A1Q3G0N2   A0A1W4VL14   B4NEH2   B4H2W6   Q29IR7   A0A0M4EKI6   A0A1J1J4Y4   B3MXN7   Q17CG5   R4WJ81   B4NT31   D6WH26   Q9VTQ1   A0A1D2NN33   B4LF63   B4HF12   A0A1B6GB50   B3NH25   Q8MZB1   A0A1A9Z670  

Pubmed

19121390    26354079    26227816    28756777    23622113    21347285    + More
24508170    30249741    21719571    26369729    25315136    26108605    12364791    14747013    17210077    29403074    20920257    23761445    21292972    25244985    24495485    21282665    26334808    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    25348373    24845553    15632085    17510324    23691247    22936249    18362917    19820115    27289101   

EMBL

BABH01012149    KQ459590    KPI97275.1    JTDY01002785    KOB70734.1    ODYU01001414    + More
SOQ37563.1    NWSH01001010    PCG73139.1    KZ149971    PZC76060.1    KOB70735.1    GAIX01009279    JAA83281.1    PZC76061.1    GBYB01008057    GBYB01013625    JAG77824.1    JAG83392.1    KQ981560    KYN39983.1    ADTU01012591    KQ435687    KOX81351.1    KK107102    QOIP01000005    EZA59632.1    RLU23144.1    KQ980800    KYN12818.1    KQ982130    KYQ59829.1    GL888326    EGI62786.1    GEDC01010992    JAS26306.1    KQ978379    KYM94395.1    GDAI01001109    JAI16494.1    GGFM01005574    MBW26325.1    GGFJ01009445    MBW58586.1    KZ288191    PBC34479.1    JRES01000741    KNC28834.1    AAAB01008987    EDO63257.2    GGFJ01009443    MBW58584.1    APCN01000860    PYGN01001734    PSN33126.1    ADMH02001070    ETN64189.1    LBMM01003750    KMQ93181.1    GL732528    EFX86830.1    AXCN02001178    AXCM01003332    GAMD01002854    JAA98736.1    GDIP01026662    GDIQ01023332    LRGB01001581    JAM77053.1    JAN71405.1    KZS11087.1    UFQS01001009    UFQT01001009    SSX08559.1    SSX28475.1    ACPB03006895    GFDG01002248    JAV16551.1    UFQT01000234    SSX22149.1    GAMC01015063    GAMC01015061    GAMC01015059    JAB91494.1    GECL01001314    JAP04810.1    GL766194    EFZ15497.1    NEVH01026401    PNF14202.1    GBGD01003069    JAC85820.1    KQ414705    KOC63243.1    GDHF01030368    GDHF01016640    GDHF01014735    GDHF01004549    JAI21946.1    JAI35674.1    JAI37579.1    JAI47765.1    ATLV01020514    KE525302    KFB45373.1    OUUW01000003    SPP78661.1    SPP78660.1    AE014298    AY122097    AAF48267.1    AAM52609.1    CM000162    EDX01574.1    CH940664    EDW62957.1    CM000366    EDX17825.1    CH480836    EDW49023.1    KK855396    PTY22360.1    GAKP01011230    GAKP01011228    JAC47722.1    GBYB01007700    JAG77467.1    CH954180    EDV47201.1    CH916371    EDV91662.1    AJWK01024033    KK853162    KDR10435.1    GFDL01001703    JAV33342.1    CH964239    EDW82141.1    CH479204    EDW30683.1    CH379063    EAL32586.1    CP012528    ALC49928.1    CVRI01000072    CRL07469.1    CH902630    EDV38502.1    CH477308    EAT44056.1    AK417540    BAN20755.1    CH982650    CM002912    EDX15721.1    KMY99096.1    KQ971321    EFA00622.1    AE014296    BT032663    AAF49995.1    ACD81677.1    LJIJ01000001    ODN06674.1    CH940647    EDW70251.2    CH480815    EDW41181.1    GECZ01010266    GECZ01004355    JAS59503.1    JAS65414.1    CH954178    EDV51482.1    AY113272    AAM29277.1   

Proteomes

UP000005204    UP000053268    UP000037510    UP000218220    UP000078541    UP000005205    + More
UP000053105    UP000053097    UP000279307    UP000078492    UP000075809    UP000007755    UP000078542    UP000095301    UP000075903    UP000076407    UP000242457    UP000037069    UP000007062    UP000075840    UP000075902    UP000245037    UP000075885    UP000095300    UP000000673    UP000036403    UP000069272    UP000075880    UP000075901    UP000075881    UP000000305    UP000075886    UP000076408    UP000075883    UP000005203    UP000076858    UP000075884    UP000075900    UP000015103    UP000075920    UP000235965    UP000053825    UP000030765    UP000268350    UP000000803    UP000002282    UP000008792    UP000000304    UP000001292    UP000008711    UP000001070    UP000092461    UP000027135    UP000192221    UP000007798    UP000008744    UP000001819    UP000092553    UP000183832    UP000007801    UP000008820    UP000007266    UP000094527    UP000092445   

PRIDE

H9JQM3    H9JQM2    Q9VYD6    Q9VTQ1    Q8MZB1   

Pfam

PF04117   Mpv17_PMP22

Interpro

IPR007248   Mpv17_PMP22       

ProteinModelPortal

H9JQM3   A0A194Q1J9   A0A0L7L636   A0A2H1V9P0   A0A2A4JMU7   A0A2W1BTG4   + More
A0A0L7L5Q2   S4NWZ1   H9JQM2   A0A2W1BP53   A0A0C9R5J8   A0A195FHX9   A0A158NDC5   A0A0N1IU85   A0A026WUE7   A0A195DIV4   A0A151XHF0   F4WSP3   A0A1B6DKT7   A0A195C197   A0A0K8TQ51   A0A2M3ZCU8   A0A1I8MDS8   A0A182V318   A0A2M4BZU2   A0A182X9T9   A0A2A3ETK4   A0A0L0CBJ4   A7UVN3   A0A2M4C005   A0A182HKS1   A0A182TVA8   A0A2P8XM98   A0A182P2G5   A0A1I8QEI8   W5JN39   A0A0J7KS97   A0A182F7A0   A0A182ITP7   A0A182SFN5   A0A182JPC2   E9G037   A0A182QUL2   A0A182YGG3   A0A182MLC6   A0A088A5A0   T1DQ11   A0A0P6ANT0   A0A182N5D8   A0A336MDW1   A0A182RNG6   T1HAM2   A0A1L8ECV5   A0A336LZI3   A0A182VR93   W8BPU9   A0A0V0GBS9   E9IVA4   A0A2J7PCZ2   A0A069DPS8   A0A0L7QX96   A0A0K8U5W2   A0A084W579   A0A3B0K0W4   A0A3B0JT73   Q9VYD6   B4Q2B3   B4MEI2   B4R4C3   B4IGS3   A0A2R7WTA0   A0A034W0A6   A0A0C9RHD6   B3NWN9   B4JLQ1   A0A1B0CQT8   A0A067QZD0   A0A1Q3G0N2   A0A1W4VL14   B4NEH2   B4H2W6   Q29IR7   A0A0M4EKI6   A0A1J1J4Y4   B3MXN7   Q17CG5   R4WJ81   B4NT31   D6WH26   Q9VTQ1   A0A1D2NN33   B4LF63   B4HF12   A0A1B6GB50   B3NH25   Q8MZB1   A0A1A9Z670  

KEGG

101736373    K13348 protein Mpv17 | (RefSeq) mpv17-like protein 2

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0061668   GO:0005737   GO:0006885   GO:0015385   GO:0006812   GO:0015299   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR11266  

Length:

212

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

42.27293

Exp number, first 60 AAs:

2.8138

Total prob of N-in:

0.88849

inside

1  -  110

TMhelix

111  -  133

outside

134  -  212

 

 

Pi

154.052314

Theta

155.260554

Tajima's D

0.47478

CLR

0.768189

CSRT

0.505924703764812

Interpretation

Uncertain