SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06545
Pre Gene Modal
BGIBMGA011649
Annotation
PREDICTED:_uncharacterized_protein_LOC101740472_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.124
 

Sequence

CDS
ATGTCATTAGTTCGTTTGATCGTCCCAGTACAAGAATCTCGATGGGCTGTAACAAGACCCCTTGAGTTGGTTAAACTCGGAACGGCGTCTCTTTGTCTCACATTAGTAAACATCGCGTGTATATTTGTAGCCGGAGTGGCAGTCTACAAGGTTAAAAAAGTATGTTCCCTCAGCGAAAGGGACATTTCATGGTGGGTGGGCAATAAAAATCGATTGAACGATTGTGATCAAGACATAAAAGAAAATAGCAAGATATTCGATGAAGTATACAGCAAGTGGTGCAATGAGGCTGACAAGATAAATCGAAAAGAGGAGGGGGTCCTGCCATCTGTCATTCACAGTGACACCGTCACGTACCGCCGAAACCAAGGAATCGACCGACAGAAAGCCCAGAATATTGAAACTGTCTTCTCAGAAATGTGCCAACGACGAACGCTTCCAGTGTATTTGAAGTGGAAGAATTACATTTTAGAATATGCAAACATAAGTCACAAGCGGCAACAGTCGCTTCCAATCAATGTGTAA
Protein
MSLVRLIVPVQESRWAVTRPLELVKLGTASLCLTLVNIACIFVAGVAVYKVKKVCSLSERDISWWVGNKNRLNDCDQDIKENSKIFDEVYSKWCNEADKINRKEEGVLPSVIHSDTVTYRRNQGIDRQKAQNIETVFSEMCQRRTLPVYLKWKNYILEYANISHKRQQSLPINV

Summary

Pfam
PF04087   DUF389
Interpro
IPR005240   DUF389       

Ontologies

Topology

Length:
174
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.74981
Exp number, first 60 AAs:
21.74925
Total prob of N-in:
0.07589
POSSIBLE N-term signal
sequence
outside
1  -  25
TMhelix
26  -  48
inside
49  -  174
 
 

Population Genetic Test Statistics

Pi
156.395073
Theta
169.318173
Tajima's D
0.099341
CLR
1.414792
CSRT
0.3970801459927
Interpretation
Uncertain
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