SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06541
Pre Gene Modal
BGIBMGA011834
Annotation
methionine_sulfoxide_reductase_[Bombyx_mori]
Full name
Peptide methionine sulfoxide reductase      
Alternative Name
Ecdysone-induced protein 28/29 kDa
Methionine-S-sulfoxide reductase
Peptide-methionine (S)-S-oxide reductase
Location in the cell
Cytoplasmic   Reliability : 1.169 Mitochondrial   Reliability : 1.651
 

Sequence

CDS
ATGAAGCCACCAGTTAACAACACCCTTTTGCACGATGTGGACATTCCCACGAAGAAGGCGACTTTTGGTATGGGCTGCTTCTGGTCAAACGATTCTCTTTTCGGCGCCACGCTCGGTGTCATACGCACTCGTGTGGGATACGCCGGTGGCACGACCAAGAATCCGCATTACAGAAGCATCGGGGACCACACAGAAGTTATAGAGATCGATTATGATCCGAAAACTGTTACCTATGAGGAGCTTCTCGAAATTTTCTGGGCTAACCACGAGTACGGACTAACCACCAAATTAAAGAGACAGTATCAGTCAATGATTCTGTACCACGATGATGAACAACGTTTAGTGGCTGAAGCCTCGCACAGAGCCGTGCAGAGCCGCTGTAACGAGACCTTACGCACTGAGATAGCGAAGGCTGACGTTTTCTATCCAGCTGAAGACTACCATCAGAAATACAGACTTCAAGGCCACAAAGACTTCTGCCGCAGTATCGGGCTCGATTCCTCTAAGCTACAGACTTCTCATTTGGCCGCCAGACTCAACGGTTACCTGGTCGGTGTTGGAGGAATGAATCAATTCGACCAGGAACTGCCGAAACTAGGCCTCAACGAGAAACAAGCTGAATACGTGAGGAGGGAGCTTGAACGCAACGAAGGCGGCGGTCTGGCTTGCTAA
Protein
MKPPVNNTLLHDVDIPTKKATFGMGCFWSNDSLFGATLGVIRTRVGYAGGTTKNPHYRSIGDHTEVIEIDYDPKTVTYEELLEIFWANHEYGLTTKLKRQYQSMILYHDDEQRLVAEASHRAVQSRCNETLRTEIAKADVFYPAEDYHQKYRLQGHKDFCRSIGLDSSKLQTSHLAARLNGYLVGVGGMNQFDQELPKLGLNEKQAEYVRRELERNEGGGLAC

Summary

Description
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
Catalytic Activity
[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]
[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide
Similarity
Belongs to the MsrA Met sulfoxide reductase family.
Keywords
Alternative splicing   Complete proteome   Oxidoreductase   Reference proteome   Ubl conjugation  
Feature
chain  Peptide methionine sulfoxide reductase
splice variant  In isoform Eip29.
EC Number
1.8.4.11
EMBL
DQ443169    ABF51258.1    BABH01012156    GAIX01012243    JAA80317.1    NWSH01004534    + More
PCG64976.1    AGBW02013253    OWR43812.1    AK401769    BAM18391.1    ODYU01003010    SOQ41233.1    RSAL01000094    RVE47866.1    KQ459590    KPI97269.1    AK405394    BAM20721.1    JTDY01001838    KOB72754.1    ATLV01023950    KE525347    KFB50153.1    AJWK01027294    GFDF01004134    JAV09950.1    GGFM01000802    MBW21553.1    APCN01003307    AAAB01008986    EAA00184.4    AXCN02001024    GGFJ01009270    MBW58411.1    GGFJ01008956    MBW58097.1    EAA00212.3    DQ440056    ABF18089.1    KQ971361    EFA08080.1    CH477198    EAT48308.1    JXUM01069649    GAPW01003903    GAPW01003902    KQ562562    JAC09696.1    KXJ75615.1    GGFL01004921    MBW69099.1    GDAI01002505    JAI15098.1    GGFK01002846    MBW36167.1    GALX01002013    JAB66453.1    GFDL01006905    JAV28140.1    CVRI01000069    CRL07045.1    DS233029    EDS27596.1    GFDG01001668    JAV17131.1    JRES01000760    KNC28560.1    GFDG01001667    JAV17132.1    GANO01002372    JAB57499.1    GFDG01001674    JAV17125.1    GFDG01000110    JAV18689.1    GFDG01001671    JAV17128.1    GFDG01001670    JAV17129.1    GFDG01001669    JAV17130.1    GFDG01003515    JAV15284.1    GFDG01003514    JAV15285.1    GFDL01007435    JAV27610.1    GFDG01003224    JAV15575.1    GAKP01015856    JAC43096.1    KXJ75616.1    GAMC01006707    JAB99848.1    EAT48309.1    KQ461190    KPJ07274.1    GAMC01006708    GAMC01006706    JAB99849.1    BT012430    AAS93701.1    EDS27595.1    DS231920    EDS26382.1    EZ422103    ADD18307.1    CCAG010023097    GBXI01007974    JAD06318.1    CH480815    EDW41581.1    CM000363    CM002912    EDX10549.1    KMY99748.1    JXJN01018237    BT044581    ACI16543.1    X58286    X04024    X04521    AF541958    AE014296    BT004857    KMY99752.1    CH891752    KRK05263.1    CH954178    EDV52114.2    AAS64994.2    KRK05265.1    KMY99750.1    CH964278    EDW85411.1    AGB94571.1    AGB94572.1    CH479191    EDW26201.1    GEZM01064621    JAV68685.1    CH379069    KRT07504.1    GEZM01064620    JAV68686.1    CH902618    EDV40872.2    KK107321    QOIP01000002    EZA52657.1    RLU25906.1   
Pfam
PF01625   PMSR        + More
PF12796   Ank_2
Interpro
IPR036509   Met_Sox_Rdtase_MsrA_sf        + More
IPR002569   Met_Sox_Rdtase_MsrA       
IPR020845   AMP-binding_CS       
IPR002110   Ankyrin_rpt       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
SUPFAM
SSF55068   SSF55068        + More
SSF48403   SSF48403       
Gene 3D
PDB
4U66     E-value=1.16474e-36,     Score=381

Ontologies

Topology

Length:
223
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.686700000000001
Exp number, first 60 AAs:
0.68465
Total prob of N-in:
0.03465
outside
1  -  223
 
 

Population Genetic Test Statistics

Pi
153.6538
Theta
136.844355
Tajima's D
-1.047374
CLR
114.829506
CSRT
0.124443777811109
Interpretation
Possibly Positive selection
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