Gene

KWMTBOMO06528

Pre Gene Modal

BGIBMGA011841

Annotation

PREDICTED:_ubiquitin_domain-containing_protein_UBFD1-like_[Bombyx_mori]

Location

Bomo_Chr11(-):9815244-9819729      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.722

CDS

ATGGATCACATAGCATCAGAAAAAGGAGATACAACAGAAAATCAAGATCCAAATTCTGTATCGAATGGCGCAACTAAAATCATGGATAAACCCGTGGTCAACGAAAAAATATTGCAGATAGATCCACCAGCGGAGTGCTCAGCCGGTACATCCGATACCACAGAGGAAAGCGAAGTCTGCGAGATCCCAGAACAAGTCGAATTTACTGTAGTTTTTAACAAAGTGAAACATGATATTACGTTTGCTTACGACGCCACAGTGTTAGAACTAAAAGCTCATTTGGAAAGGATATGCGGCGTTCCGCAATCAGCTCAAAAATTAATCATCAAAGGTATGGCTCGCGATGAAATGACGCTCAGGAAAGCTGGAATCGTCAAAGGAGGAAAAGTTATGCTTGTAGGATCCAAAATGGATGACATATTGGCTGTGAAAAGTGTCCCAAAGGAAATTTTAGAAGAAAAAGCTACAACCCAAACTAGTAAAGAACCATTATGCATGCAAAAAATTCATAGGAAAGTACTTGATAAAGGTATTCCGCCTGATGTAATGCCAGGAATTAAAGGAGTAAAGGAGCCTCTACCACCAGTACCTTTAAGTGGTATGTTAAATAAACATGGCGGTAAAGTAAGATTAACATTCAAACCAGATCAGGATCAACTTTGGTTAGGCACTAAAGAACGCACAGAGAAACTTGCCATGACTTCTATCAAAAGTATCACATCTGAACCTATAAAAGATCACGAGGAATATCACATCATGGGTCTACAACTAGGTCCAACAGAAGCATCTAGGTATTGGGTTTACTGGGTTCCAGCTCAATACATTGAAGCCATAAAAGATGCAGTGCTTGGAGTTTGGCAGTTCTTCTAA

Protein

MDHIASEKGDTTENQDPNSVSNGATKIMDKPVVNEKILQIDPPAECSAGTSDTTEESEVCEIPEQVEFTVVFNKVKHDITFAYDATVLELKAHLERICGVPQSAQKLIIKGMARDEMTLRKAGIVKGGKVMLVGSKMDDILAVKSVPKEILEEKATTQTSKEPLCMQKIHRKVLDKGIPPDVMPGIKGVKEPLPPVPLSGMLNKHGGKVRLTFKPDQDQLWLGTKERTEKLAMTSIKSITSEPIKDHEEYHIMGLQLGPTEASRYWVYWVPAQYIEAIKDAVLGVWQFF

Uniprot

A0A1E1W517   A0A2H1W2D9   A0A3S2NWL0   A0A2A4J7V1   A0A2A4J6K1   A0A194Q1H9   + More
A0A194QPK9   H9JQN5   A0A2W1BQ79   A0A1W4WIV9   A0A067R6G5   A0A2P8YHA9   E2ABK8   A0A139WKT4   D6WHD2   A0A1Y1NGG6   A0A151X568   A0A088ANZ1   E9IF54   A0A151I5V9   A0A158NAJ7   A0A2A3EQP0   A0A2J7Q1Y1   A0A0M9A0S7   E2BPJ5   J3JXC4   A0A195EVF6   A0A154PNP8   A0A195CK45   K7IM32   A0A1B6KMQ4   A0A232EPS6   A0A0T6B0J6   E0VUC8   T1IXM7   A0A1B6E6C5   A0A2C9K227   A0A0L7QNA8   A0A0P4VM97   R4G2V4   A0A195DQP1   A0A2L2Y383   A0A1S3I6L9   A0A087UJ22   A0A069DRZ3   A0A2G8KX73   A0A224XU78   A0A310SG99   A7RUD6   A0A0V0G4E3   E9HDA5   A0A161M9M9   A0A226NNY3   A0A023F8V2   A0A384BFC1   A0A0P5HGM3   A0A091MCU8   A0A091VA58   A0A087RG98   A0A2Y9DF32   A0A091JYN6   A0A093SPJ5   A0A0P4WZ69   A0A099ZWD9   A0A093JFN4   A0A091MYA2   A0A091U0C7   A0A091KPD3   A0A0P5AB51   A0A3B3ZM51   A0A091IQB8   H3A1C9   A0A3Q2EB07   A0A091U852   A0A091FAT0   A0A093GZG2   F1NCX2   H0Z6K1   A0A3Q4HHT0   A0A0F7Z8J0   H2U640   A0A0B8RWI8   A0A0P5Z9L6   U3JMH9   A0A3P9D753   A0A0L8FZ30   A0A2K6PRE7   A0A2K5HYZ2   J3S5G1   A0A093J5T9   A0A3B4FKS2   A0A3Q3BLN7   A0A3P9D6H0   A0A3P8NU00   L5KND6   L9KUX9   G1N460   A0A2Y9GTC6   A0A1W7RC16  

Pubmed

26354079    19121390    28756777    24845553    29403074    20798317    + More
18362917    19820115    28004739    21282665    21347285    22516182    23537049    20075255    28648823    20566863    15562597    27129103    26561354    26334808    29023486    17615350    21292972    25474469    25463417    9215903    15592404    20360741    25186727    21551351    25476704    25362486    23025625    23258410    23385571    20838655    26358130   

EMBL

GDQN01008979    JAT82075.1    ODYU01005896    SOQ47255.1    RSAL01000043    RVE50726.1    + More
NWSH01002655    PCG67748.1    PCG67747.1    KQ459590    KPI97255.1    KQ461190    KPJ07289.1    BABH01012175    KZ149984    PZC75725.1    KK852855    KDR14947.1    PYGN01000596    PSN43632.1    GL438297    EFN69179.1    KQ971321    KYB28678.1    EFA00644.1    GEZM01008448    JAV94777.1    KQ982519    KYQ55553.1    GL762758    EFZ20818.1    KQ976413    KYM90392.1    ADTU01010342    KZ288193    PBC34027.1    NEVH01019376    PNF22590.1    KQ435796    KOX73543.1    GL449633    EFN82399.1    APGK01053605    BT127893    KB741231    KB631770    AEE62855.1    ENN72226.1    ERL86010.1    KQ981954    KYN32240.1    KQ435007    KZC13472.1    KQ977642    KYN01105.1    GEBQ01027260    GEBQ01012531    GEBQ01008991    JAT12717.1    JAT27446.1    JAT30986.1    NNAY01002909    OXU20341.1    LJIG01016360    KRT80834.1    DS235785    EEB16984.1    JH431654    GEDC01003830    JAS33468.1    KQ414860    KOC60054.1    GDKW01002706    JAI53889.1    ACPB03001920    GAHY01002261    JAA75249.1    KQ980612    KYN15132.1    IAAA01009428    LAA02623.1    KK120015    KFM77361.1    GBGD01002497    JAC86392.1    MRZV01000322    PIK52598.1    GFTR01004364    JAW12062.1    KQ770827    OAD52580.1    DS469540    EDO44836.1    GECL01003301    JAP02823.1    GL732623    EFX70281.1    GEMB01003926    JAR99330.1    MCFN01000008    OXB68839.1    GBBI01000867    JAC17845.1    GDIQ01228262    JAK23463.1    KK527354    KFP68612.1    KL410807    KFQ99968.1    KL226347    KFM12502.1    KK535233    KFP29226.1    KL672051    KFW84539.1    GDRN01045107    JAI66884.1    KL869809    KGL86027.1    KK574959    KFW09789.1    KK838634    KFP81619.1    KK493620    KFQ64382.1    KK753197    KFP42459.1    GDIP01214003    LRGB01001899    JAJ09399.1    KZS10060.1    KK500817    KFP10522.1    AFYH01255930    AFYH01255931    AFYH01255932    AFYH01255933    KK418791    KFQ86030.1    KK718885    KFO58915.1    KL205656    KFV72505.1    AADN05000376    ABQF01032893    GBEX01003786    JAI10774.1    GBSH01002999    JAG66028.1    GDIP01047924    JAM55791.1    AGTO01000601    KQ425066    KOF70007.1    JU176454    AFJ51977.1    KL217169    KFV74309.1    KB030664    ELK12103.1    KB320654    ELW66289.1    GDAY02002787    JAV48680.1   

Proteomes

UP000283053    UP000218220    UP000053268    UP000053240    UP000005204    UP000192223    + More
UP000027135    UP000245037    UP000000311    UP000007266    UP000075809    UP000005203    UP000078540    UP000005205    UP000242457    UP000235965    UP000053105    UP000008237    UP000019118    UP000030742    UP000078541    UP000076502    UP000078542    UP000002358    UP000215335    UP000009046    UP000076420    UP000053825    UP000015103    UP000078492    UP000085678    UP000054359    UP000230750    UP000001593    UP000000305    UP000198323    UP000053283    UP000053286    UP000248480    UP000053258    UP000053858    UP000076858    UP000261520    UP000053119    UP000008672    UP000265020    UP000052976    UP000053584    UP000000539    UP000007754    UP000261580    UP000005226    UP000016665    UP000265160    UP000053454    UP000233200    UP000233080    UP000053875    UP000261460    UP000264840    UP000265100    UP000010552    UP000011518    UP000001645    UP000248481   

PRIDE

H9JQN5   

Pfam

PF00240   ubiquitin

Interpro

IPR039120   UBFD1        + More
IPR029071   Ubiquitin-like_domsf       
IPR000626   Ubiquitin_dom       
IPR019954   Ubiquitin_CS       

SUPFAM

SSF54236   SSF54236       

ProteinModelPortal

A0A1E1W517   A0A2H1W2D9   A0A3S2NWL0   A0A2A4J7V1   A0A2A4J6K1   A0A194Q1H9   + More
A0A194QPK9   H9JQN5   A0A2W1BQ79   A0A1W4WIV9   A0A067R6G5   A0A2P8YHA9   E2ABK8   A0A139WKT4   D6WHD2   A0A1Y1NGG6   A0A151X568   A0A088ANZ1   E9IF54   A0A151I5V9   A0A158NAJ7   A0A2A3EQP0   A0A2J7Q1Y1   A0A0M9A0S7   E2BPJ5   J3JXC4   A0A195EVF6   A0A154PNP8   A0A195CK45   K7IM32   A0A1B6KMQ4   A0A232EPS6   A0A0T6B0J6   E0VUC8   T1IXM7   A0A1B6E6C5   A0A2C9K227   A0A0L7QNA8   A0A0P4VM97   R4G2V4   A0A195DQP1   A0A2L2Y383   A0A1S3I6L9   A0A087UJ22   A0A069DRZ3   A0A2G8KX73   A0A224XU78   A0A310SG99   A7RUD6   A0A0V0G4E3   E9HDA5   A0A161M9M9   A0A226NNY3   A0A023F8V2   A0A384BFC1   A0A0P5HGM3   A0A091MCU8   A0A091VA58   A0A087RG98   A0A2Y9DF32   A0A091JYN6   A0A093SPJ5   A0A0P4WZ69   A0A099ZWD9   A0A093JFN4   A0A091MYA2   A0A091U0C7   A0A091KPD3   A0A0P5AB51   A0A3B3ZM51   A0A091IQB8   H3A1C9   A0A3Q2EB07   A0A091U852   A0A091FAT0   A0A093GZG2   F1NCX2   H0Z6K1   A0A3Q4HHT0   A0A0F7Z8J0   H2U640   A0A0B8RWI8   A0A0P5Z9L6   U3JMH9   A0A3P9D753   A0A0L8FZ30   A0A2K6PRE7   A0A2K5HYZ2   J3S5G1   A0A093J5T9   A0A3B4FKS2   A0A3Q3BLN7   A0A3P9D6H0   A0A3P8NU00   L5KND6   L9KUX9   G1N460   A0A2Y9GTC6   A0A1W7RC16  

PDB

1V86     E-value=2.71498e-08,     Score=138

KEGG

101741174    no KO assigned | (RefSeq) ubiquitin domain-containing protein UBFD1-like

GO

GO:0005515   GO:0016853   GO:0045454   GO:0020037   GO:0006259   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR16470  

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01505

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03577

outside

1  -  289

 

 

Pi

200.299908

Theta

135.924236

Tajima's D

-0.802607

CLR

1.889351

CSRT

0.168891555422229

Interpretation

Uncertain