SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06524  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011844
Annotation
protein_disulfide_isomerase_precursor_[Bombyx_mori]
Full name
Protein disulfide-isomerase      
Location in the cell
ER   Reliability : 4.553
 

Sequence

CDS
ATGCGTGTTTTAATTTTCACGGCTATAGCCCTGCTAGGGCTCGCTCTCGGAGATGAAGTGCCCACTGAAGAAAATGTGCTCGTTTTGAGTAAAGCTAACTTTGAAACTGTAATTACAACCACGGAGTACATTTTAGTTGAATTCTATGCTCCATGGTGCGGCCACTGCAAATCTCTGGCACCGGAATACGCCAAGGCAGCAACAAAGCTGGCTGAAGAAGAATCTCCTATCAAACTAGCGAAAGTTGACGCAACTCAAGAACAGGATCTCGCCGAGAGCTACGGTGTACGAGGATACCCGACTCTCAAATTCTTCAGGAATGGCAGTCCTATCGACTATTCAGGTGGTCGTCAAGCTGATGACATCATCAGTTGGCTGAAGAAGAAGACTGGCCCCCCTGCTGTTGAGGTCACCTCTGCTGAACAGGCTAAAGAACTTATCGATGCCAATACTGTTATTGTATTTGGTTTCTTTTCGGACCAGAGCTCAGCCAGAGCCAAAACTTTCCTTTCAACTGCTCAAGTTGTTGATGACCAAGTATTTGCTATTGTCAGCGATGAGAAAGTGATCAAGGAGTTGGAGGCTGAAGATGAAGATGTTGTGCTTTTCAAGAACTTCGAAGAGAAACGTGTCAAATATGAAGATGAAGAAATCACTGAGGATCTGCTCAATGCTTGGGTGTTTGTCCAGAGCATGCCTACTATCGTTGAATTCTCGCATGAAACTGCTTCCAAGATCTTTGGTGGAAAGATCAAATACCACCTTCTTATCTTCTTATCCAAGAAAAATGGCGATTTCGAGAAATACCTTGAGGATTTGAAGCCGGTCGCGAAGACCTACCGCGACAGGATCATGACCGTCGCCATCGATGCCGACGAAGATGAACACCAAAGGATCTTGGAGTTCTTCGGCATGAAGAAGGATGAGGTTCCATCTGCCCGTCTGATCGCCCTTGAACAAGACATGGCCAAATACAAGCCCAGCAGTAATGAGCTGTCGCCTAACGCTATTGAGGAATTCGTTCAATCGTTCTTCGACGGCACCCTGAAGCAGCATCTGCTGAGCGAGGACCTGCCCTCGGACTGGGCCGCCAAACCCGTCAAAGTGCTCGTCGCCGCCAACTTCGACGAAGTCGTCTTCGACACAACTAAGAAGGTCCTCGTCGAATTCTACGCTCCTTGGTGCGGCCACTGCAAACAGCTGGTCCCTATCTACGACAAGCTCGGCGAGCACTTTGAGAACGACGATGACGTCATCATTGCCAAAATCGACGCCACCGCCAACGAACTGGAACACACCAAGATCACGTCCTTCCCAACGATCAAACTTTACAGCAAGGACAACCAGGTCCACGACTACAACGGCGAGAGGACACTGGCCGGCCTCACCAAGTTCGTTGAGACCGACGGTGAAGGCGCCGAGCCAGGACCTTCTGTGACCGAATTCGAAGAGGAGGAAGATGTGCCTGCCAGAGACGAGTTATAA
Protein
MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIKELEAEDEDVVLFKNFEEKRVKYEDEEITEDLLNAWVFVQSMPTIVEFSHETASKIFGGKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPSDWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEEEDVPARDEL

Summary

Description
Participates in the folding of proteins containing disulfide bonds.
Catalytic Activity
Catalyzes the rearrangement of -S-S- bonds in proteins.
Subunit
Homodimer.
Similarity
Belongs to the protein disulfide isomerase family.
Keywords
Alternative splicing   Complete proteome   Disulfide bond   Endoplasmic reticulum   Isomerase   Redox-active center   Reference proteome   Repeat   Signal  
Feature
chain  Protein disulfide-isomerase
splice variant  In isoform D.
EC Number
5.3.4.1
EMBL
BABH01012177    AF325211    AAG45936.1    AK401171    KQ459590    BAM17793.1    + More
KPI97250.1    NWSH01002655    PCG67756.1    AK402305    BAM18927.1    JX183988    AGF69546.1    ODYU01004447    SOQ44326.1    GAIX01012014    JAA80546.1    JF777457    AEU11802.1    AGBW02003612    OWR55527.1    KZ149984    PZC75730.1    GALX01002703    JAB65763.1    CVRI01000042    CRK95503.1    GFDF01004054    JAV10030.1    GDRN01036013    JAI67374.1    GFDF01004053    JAV10031.1    GANO01001143    JAB58728.1    GFDF01004052    JAV10032.1    DS231920    EDS26398.1    GAKP01014585    JAC44367.1    DS232318    EDS39919.1    GDHF01033678    JAI18636.1    UFQT01000187    SSX21338.1    JN863961    AEW66914.1    AAAB01008986    EAL38666.3    APCN01003309    GDRN01036014    JAI67373.1    AXCM01006744    NEVH01007823    PNF35251.1    GFDG01001402    JAV17397.1    KA647381    AFP62010.1    GFDG01001401    JAV17398.1    GAMC01017431    GAMC01017428    JAB89124.1    AXCN02001026    GANO01000727    JAB59144.1    ATLV01023952    KE525347    KFB50164.1    GFDG01001400    JAV17399.1    KQ971321    EFA00647.1    KK852567    KDR21216.1    GAMD01002863    JAA98727.1    GGFK01000221    MBW33542.1    GGFJ01004696    MBW53837.1    GFDL01008773    JAV26272.1    GEBQ01030325    JAT09652.1    GGFK01000217    MBW33538.1    ADMH02001279    ETN63240.1    GGFK01000273    MBW33594.1    GGFJ01004734    MBW53875.1    GECU01021031    GECU01016836    GECU01003704    JAS86675.1    JAS90870.1    JAT04003.1    GBHO01009502    GBHO01009500    GBRD01012827    JAG34102.1    JAG34104.1    JAG52999.1    GEZM01077735    JAV63191.1    LNIX01000004    OXA55402.1    FJ179395    ACN89260.1    AK416967    BAN20182.1    GDIQ01045348    JAN49389.1    JXUM01060637    JXUM01060638    KQ562111    KXJ76669.1    DQ440216    CH477198    ABF18249.1    EAT48285.1    CH933809    EDW18184.1    MH979838    AYV89293.1    MH990459    AYV89006.1    CM000159    EDW94574.1    CM000363    CM002912    EDX10517.1    KMY99709.1    GFAH01000417    JAV47972.1    OUUW01000002    SPP76002.1    CH480815    EDW41551.1    CH954178    EDV51829.1    CAEY01000947    CH379069    EAL30673.1    AE014296    AHN58095.1    GFWZ01000275    MBW20265.1    U18973    BT001544    BT003181    BT011488    BT012439    GGFM01006048    MBW26799.1    CH902618    EDV40898.1    GFDL01008799    JAV26246.1    CH479191    EDW26228.1    GL448096    EFN85405.1    CH964101    EDW79461.1    CCAG010000249    EZ423995    ADD20271.1    CH940647    EDW70558.1    CH916366    EDV97470.1    LBMM01000553    KMQ98073.1    LC164244    BBC20867.1    GDKW01002455    JAI54140.1   
Pfam
PF00085   Thioredoxin
Interpro
IPR036249   Thioredoxin-like_sf        + More
IPR017937   Thioredoxin_CS       
IPR005792   Prot_disulphide_isomerase       
IPR013766   Thioredoxin_domain       
IPR005788   Disulphide_isomerase       
SUPFAM
SSF52833   SSF52833       
PDB
4EL1     E-value=1.82176e-136,     Score=1246

Ontologies

Topology

Subcellular location
Endoplasmic reticulum lumen  
SignalP
Position:   1 - 17,         Likelihood:  0.999395
 
 
Length:
494
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07015
Exp number, first 60 AAs:
0.06996
Total prob of N-in:
0.00530
outside
1  -  494
 
 

Population Genetic Test Statistics

Pi
279.48187
Theta
190.171513
Tajima's D
2.14643
CLR
0.167676
CSRT
0.904904754762262
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 QHIISEDIPSDWAAK 96.67 6e-13
26280517 FTPPKQETFFKDDANHDPQWSEEQIISAK 96.67 6e-13
25044914 FVEMCVVR 96.67 6e-13
27102218 ITSFPTIK 96.67 6e-13
26280517 TFIQPSTR 95.83 4e-08
27102218 VIVEFYAPWCGHCK 95.83 4e-08
26280517 AKPSWPSQEK 95.65 1e-07
27102218 TFISTAQVVDDQVFAIVSDEKVIK 95.65 1e-07
26280517 EIETETAVASSAEK 95.24 7e-07
25044914 EIICTVIK 95.24 7e-07
21761556 GPIGPIGFTGER 100.00 8e-07
28556443 QLVPIYDK 100.00 8e-07
28556443 QHLLSEDLPSDWAAKPVK 100.00 8e-07
26822097 QADDIISWIKK 95.24 2e-06
25860555 GIPYAAPPIGNIR 95.24 2e-06
26280517 DWIFNIMR 95.24 2e-06
25044914 TFISQPPKPQDSAPQFVDGYR 95.24 2e-06
24093152 TFIMVKPDGVQR 95.24 2e-06
24402669 TFISRPPIK 95.24 2e-06
27102218 TGPPAVEVTSAEQAK 95.24 2e-06
28467696 TFISDYVK 95.24 2e-06
28556443 QHLLSEDLPSDWAAK 100.00 3e-06
28556443 QHLLSEDLPSDWAAK 100.00 3e-06
31250652 LYPEEDTPEFKIEMIDSMYR 100.00 1e-04
26280517 KIYCAPGSVGISTTK 100.00 2e-04
28556443 VLVAANFDEVVFDTTK 100.00 3e-04
28556443 SMPTIVEFSHETASK 100.00 3e-04
28556443 QHLLSEDLPSDWAAK 100.00 4e-04
28556443 QADDIISWLK 100.00 4e-04
28556443 QADDIISWLK 100.00 4e-04
26822097 SIAPEYAK 100.00 8e-04
26280517 IFVGGISWETTDKEIR 100.00 8e-04
25044914 KTFSYAGFEMQPK 100.00 8e-04
28467696 KTGIDEGWIFFPDAAQSTK 100.00 8e-04
28556443 LGEHFENDDDVIIAK 100.00 0.001
28556443 LAEEESPIK 100.00 0.001
28556443 IMTVAIDADEDEHQR 100.00 0.001
21761556 VDATQEQDLAESYGVR 100.00 0.001
28556443 VDATQEQDLAESYGVR 100.00 0.001
28556443 VDATQEQDLAESYGVR 100.00 0.001
28556443 QLVPIYDK 100.00 0.002
28556443 YALDQDASLHAK 100.00 0.002
21761556 TGPPAVEVTSAEQAK 100.00 0.003
28556443 VDATQEQDLAESYGVR 100.00 0.003
28556443 TGPPAVEVTSAEQAK 100.00 0.003
28556443 TGPPAVEVTSAEQAK 100.00 0.003
26822097 IDATANEIEHTK 100.00 0.003
25860555 CENFYGGYSCQCPAGHR 100.00 0.003
26280517 AHGGYSVFAGVGER 100.00 0.003
25044914 TGPHIYCIYPHGSVDK 100.00 0.003
24093152 TGPNFTIQK 100.00 0.003
27102218 IIEFFGMK 100.00 0.003
28467696 TGPNFTIQKK 100.00 0.003
21761556 TFLSTAQVVDDQVFAIVSDEK 100.00 0.003
28556443 TGPPAVEVTSAEQAK 100.00 0.003
28556443 TGPPAVEVTSAEQAK 100.00 0.003
28556443 TFLSTAQVVDDQVFAIVSDEK 100.00 0.003
28556443 TFLSTAQVVDDQVFAIVSDEK 100.00 0.003
26822097 IGEHFENDDDVIIAK 100.00 0.010
26280517 MNCMEYAYQIWIQGSK 100.00 0.010
25044914 IMTTFPK 100.00 0.010
27102218 EIEAEDEDVVIFK 100.00 0.010
28467696 IMTSICVGNR 100.00 0.010
28556443 IMTVAIDADEDEHQR 100.00 0.010
28556443 ILEFFGMK 100.00 0.010
28556443 ELEAEDEDVVLFK 100.00 0.010
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号