Gene

KWMTBOMO06523  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011641

Annotation

PREDICTED:_target_of_Myb_protein_1_[Amyelois_transitella]

Location

Bomo_Chr11(+):9751730-9773046      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.327

CDS

ATGTCGTTTTTTGGTGTAGGGAATCCCTTTTCTACGCCGGTGGGTCAAAAAATTGAACAAGCCACAGATGGCGCATTACCATCTGAAAATTGGGCTCTGAACATGGAAATATGCGATATAATAAACAGCAGTACGGACGGACCTAAAGATGCCATTAAAGCAATAAGAAAAAGGTTGACTACAAGCGCTGGGAAGAACTACACAGTGGTGATGTACACGCTGACTGTCCTGGAAACATGCGTAAAAAACTGTGGAAAGCCGTTCCATGTTCTCGTCTGCAATAAGGAATTTATATCAGAGTTGGTAAAATTGATTGGCCCCAAAAATGATCCGCCGACGGTGGTGCAAGACAAAGTATTGAGCCTCATCCAATGTTGGGCCGATGCCTTCCAGAACCAAGCTGAATTACAGGGAGTCGGTCAAGTGTACAACGAGCTTCGCACCAAAGGTGTTGAATTTCCGATGACCGACTTAGACGCCATGGCCCCGATTTTCACGCCACAGCGGAGTGTCCCGGATGGCGTTGAACAAGTTGGTTCCCCTCAGCGCTCCGTCTTGCCGCAGAACTCTCCTAGCAGGACAACTCCGGAACAGATCACTACTCAGGTGACGCTGAGCGACAGTCAGACCAACAAGCTGCGCGCCGACCTCGCCGTGGTGGAGGGGAACATGGCCGTCATGAACGACATGCTCAACGAGCTCACCGCCCGGCCGCAAGCAACGCGACACGACAGCGACGTCGAGCTTCTGAACGAGCTAGCGGACACGCTGCGTGCCATGCAGAGCCGCGTCGCCGAGCTCATAGCGCGCGTGGCGGCCGACGGCGCGCTCACCGCCGAGCTGCTGCACGCCAACGACCGCCTGCACAACCTGCTGCTGCGCCACGCGCGCTTCCTCAACAATAGGTCTGCAGCGGCGGCGGGCGCGGGGCCCACTCCGTCCGCCATCCTCGGCGCCGCCATGGGCGTGCCCGGCGCGGCGCCTACGTCACCAAAGAAACAAGAGGATGACGCCTTGATCGACCTAAGCGACGACGTCCCTGATATTGCGAAGCTGAGCGTAACGGATACTCAAGCAGAAAAGTCTCCGAGCAGCTCGAAGGATGAATTCGACATGTTCGCTCAATCGAGGAACATCACTTATGAAACCTCGAAGACAGGTACCAGCAGCTACGCCGATAACTTAGAAGACCAAACCACGACGAGCTTGGCCTCCGCCGCCAGCCACCGAGCCACACAGGGCCAACCTCTGGCGGCTTCCGAGAGCGTCCACGAGAGCGTGACCAGTAGCGACTTCGACAAGTTCCTGGCGGAGCGCGCGGCCGCCGCCGAGCAGCTGCCCGATATCAGCGACCGCAGCCCTAGGCACCGGCACATCAACAAGGATGACCAGGACTCTAGATATTGA

Protein

MSFFGVGNPFSTPVGQKIEQATDGALPSENWALNMEICDIINSSTDGPKDAIKAIRKRLTTSAGKNYTVVMYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADAFQNQAELQGVGQVYNELRTKGVEFPMTDLDAMAPIFTPQRSVPDGVEQVGSPQRSVLPQNSPSRTTPEQITTQVTLSDSQTNKLRADLAVVEGNMAVMNDMLNELTARPQATRHDSDVELLNELADTLRAMQSRVAELIARVAADGALTAELLHANDRLHNLLLRHARFLNNRSAAAAGAGPTPSAILGAAMGVPGAAPTSPKKQEDDALIDLSDDVPDIAKLSVTDTQAEKSPSSSKDEFDMFAQSRNITYETSKTGTSSYADNLEDQTTTSLASAASHRATQGQPLAASESVHESVTSSDFDKFLAERAAAAEQLPDISDRSPRHRHINKDDQDSRY

Uniprot

A0A2A4J6L0   A0A1E1WMT3   A0A1E1WNY6   A0A194PWW1   A0A212FP50   A0A2J7PJL2   + More
D6WHD9   A0A067QWK9   A0A0L7QNF4   A0A1Y1MCE1   A0A2J7PJK9   A0A026WUC1   A0A1Y1MDN9   E9IVA6   E2AFD6   A0A3L8DR52   A0A1B6CYU7   A0A0J7KSH2   V9IG33   A0A310S4A2   A0A195DIW5   A0A0C9R7U5   E2B6W2   V5GT69   A0A087ZZE1   A0A195C0M1   A0A2A3EIP7   A0A195FHZ9   A0A151I115   A0A158NDC3   A0A0C9QTT2   A0A1B6F9U9   A0A1L8DW14   A0A224XNF5   A0A0V0G6E3   A0A023F392   A0A1L8DW12   A0A1L8DW00   U5EP22   A0A1B0CP56   A0A0P4VWL2   A0A069DUY2   Q17AJ9   A0A1S4FA26   A0A151XHJ3   A0A1Q3G3S4   A0A1Q3G3Y5   A0A1Q3G3R9   A0A1W7R9F1   A0A023ETE4   A0A1Q3G3U5   A0A1Q3G3S9   A0A1Q3G3S2   A0A154PID0   A0A1Q3G3S5   T1J1S5   T1HFP0   A0A0A9Z597   A0A0K8SEY3   A0A0K8SGD7   A0A1I8N323   A0A3Q0J0R2   A0A1W4WMT6   A0A1W4WBS9   A0A3Q0J5R5   A0A0M9A505   A0A1W4WBS5   A0A1W4WLX4   A0A087UT54   A0A182Q697   A0A1I8N338   A0A034VP97   W8C803   J9JLH3   A0A1Q3FGB6   A0A034VR48   A0A182Y352   A0A0P4WF80   Q7PNZ6   A0A2S2QI93   A0A182UUD2   A0A182KP48   K7ISH2   A0A2H8U0B3   A0A1B6LB82   A0A0A1XCG4   A0A182G7L1   A0A232FME8   A0A3F2Z155   A0A1A9W7L4   V5HHR2   A0A1W4U9B0   Q7PIF9   A0A1B0A353   A0A336M8V8   A0A1B6KQM5   A0A293N0H0   A0A1B0FGL1   D3TND3  

Pubmed

26354079    22118469    18362917    19820115    24845553    28004739    + More
24508170    21282665    20798317    30249741    21347285    25474469    27129103    26334808    17510324    24945155    25401762    26823975    25315136    25348373    24495485    25244985    12364791    20966253    20075255    25830018    26483478    28648823    25765539    14747013    17210077    20353571   

EMBL

NWSH01002655    PCG67757.1    GDQN01002898    JAT88156.1    GDQN01002349    JAT88705.1    + More
KQ459590    KPI97249.1    AGBW02003612    OWR55526.1    NEVH01024946    PNF16527.1    KQ971321    EFA00649.1    KK853282    KDR09020.1    KQ414855    KOC60148.1    GEZM01037733    JAV81965.1    PNF16526.1    KK107102    EZA59630.1    GEZM01037732    JAV81966.1    GL766194    EFZ15482.1    GL439108    EFN67829.1    QOIP01000005    RLU22871.1    GEDC01018649    JAS18649.1    LBMM01003750    KMQ93179.1    JR045756    AEY60048.1    KQ779356    OAD51972.1    KQ980800    KYN12820.1    GBYB01004100    JAG73867.1    GL446031    EFN88567.1    GALX01003624    JAB64842.1    KQ978379    KYM94397.1    KZ288230    PBC31597.1    KQ981560    KYN39981.1    KQ976599    KYM79504.1    ADTU01012589    ADTU01012590    GBYB01004097    JAG73864.1    GECZ01022760    GECZ01018546    JAS47009.1    JAS51223.1    GFDF01003468    JAV10616.1    GFTR01006743    JAW09683.1    GECL01003181    JAP02943.1    GBBI01003056    JAC15656.1    GFDF01003466    JAV10618.1    GFDF01003467    JAV10617.1    GANO01000348    JAB59523.1    AJWK01021441    GDKW01000080    JAI56515.1    GBGD01001253    JAC87636.1    CH477333    EAT43294.1    KQ982130    KYQ59827.1    GFDL01000590    JAV34455.1    GFDL01000569    JAV34476.1    GFDL01000592    JAV34453.1    GFAH01000629    JAV47760.1    GAPW01001035    JAC12563.1    GFDL01000567    JAV34478.1    GFDL01000591    JAV34454.1    GFDL01000593    JAV34452.1    KQ434924    KZC11615.1    GFDL01000595    JAV34450.1    JH431789    ACPB03012545    GBHO01038030    GBHO01004005    GDHC01008661    GDHC01005512    JAG05574.1    JAG39599.1    JAQ09968.1    JAQ13117.1    GBRD01013979    JAG51847.1    GBRD01013981    JAG51845.1    KQ435732    KOX77360.1    KK121471    KFM80543.1    AXCN02000943    GAKP01014678    JAC44274.1    GAMC01007741    JAB98814.1    ABLF02039935    GFDL01008503    JAV26542.1    GAKP01014677    JAC44275.1    GDRN01061212    GDRN01061211    JAI65231.1    AAAB01008960    EAA11281.5    GGMS01008266    MBY77469.1    GFXV01007646    MBW19451.1    GEBQ01019010    JAT20967.1    GBXI01011223    GBXI01006139    JAD03069.1    JAD08153.1    JXUM01150486    JXUM01150487    KQ571012    KXJ68261.1    NNAY01000041    OXU31628.1    GANP01001258    JAB83210.1    EAA44160.4    UFQS01000501    UFQT01000501    SSX04433.1    SSX24797.1    GEBQ01026234    JAT13743.1    GFWV01020167    MAA44895.1    CCAG010006947    EZ422935    ADD19211.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000235965    UP000007266    UP000027135    + More
UP000053825    UP000053097    UP000000311    UP000279307    UP000036403    UP000078492    UP000008237    UP000005203    UP000078542    UP000242457    UP000078541    UP000078540    UP000005205    UP000092461    UP000008820    UP000075809    UP000076502    UP000015103    UP000095301    UP000079169    UP000192223    UP000053105    UP000054359    UP000075886    UP000007819    UP000076408    UP000007062    UP000075903    UP000075882    UP000002358    UP000069940    UP000249989    UP000215335    UP000075920    UP000091820    UP000192221    UP000092445    UP000092444   

Pfam

PF00790   VHS        + More
PF03127   GAT

Interpro

IPR038425   GAT_sf        + More
IPR008942   ENTH_VHS       
IPR014645   TOM1       
IPR002014   VHS_dom       
IPR004152   GAT_dom       

SUPFAM

SSF48464   SSF48464       

Gene 3D

1.20.58.160     1.25.40.90    

ProteinModelPortal

A0A2A4J6L0   A0A1E1WMT3   A0A1E1WNY6   A0A194PWW1   A0A212FP50   A0A2J7PJL2   + More
D6WHD9   A0A067QWK9   A0A0L7QNF4   A0A1Y1MCE1   A0A2J7PJK9   A0A026WUC1   A0A1Y1MDN9   E9IVA6   E2AFD6   A0A3L8DR52   A0A1B6CYU7   A0A0J7KSH2   V9IG33   A0A310S4A2   A0A195DIW5   A0A0C9R7U5   E2B6W2   V5GT69   A0A087ZZE1   A0A195C0M1   A0A2A3EIP7   A0A195FHZ9   A0A151I115   A0A158NDC3   A0A0C9QTT2   A0A1B6F9U9   A0A1L8DW14   A0A224XNF5   A0A0V0G6E3   A0A023F392   A0A1L8DW12   A0A1L8DW00   U5EP22   A0A1B0CP56   A0A0P4VWL2   A0A069DUY2   Q17AJ9   A0A1S4FA26   A0A151XHJ3   A0A1Q3G3S4   A0A1Q3G3Y5   A0A1Q3G3R9   A0A1W7R9F1   A0A023ETE4   A0A1Q3G3U5   A0A1Q3G3S9   A0A1Q3G3S2   A0A154PID0   A0A1Q3G3S5   T1J1S5   T1HFP0   A0A0A9Z597   A0A0K8SEY3   A0A0K8SGD7   A0A1I8N323   A0A3Q0J0R2   A0A1W4WMT6   A0A1W4WBS9   A0A3Q0J5R5   A0A0M9A505   A0A1W4WBS5   A0A1W4WLX4   A0A087UT54   A0A182Q697   A0A1I8N338   A0A034VP97   W8C803   J9JLH3   A0A1Q3FGB6   A0A034VR48   A0A182Y352   A0A0P4WF80   Q7PNZ6   A0A2S2QI93   A0A182UUD2   A0A182KP48   K7ISH2   A0A2H8U0B3   A0A1B6LB82   A0A0A1XCG4   A0A182G7L1   A0A232FME8   A0A3F2Z155   A0A1A9W7L4   V5HHR2   A0A1W4U9B0   Q7PIF9   A0A1B0A353   A0A336M8V8   A0A1B6KQM5   A0A293N0H0   A0A1B0FGL1   D3TND3  

PDB

1ELK     E-value=8.07614e-52,     Score=516

KEGG

101738947    no KO assigned | (RefSeq) TOM1-like protein 2

GO

GO:0005623   GO:0006886   GO:0005622   GO:0008270   GO:0020037   GO:0006259   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

Length:

468

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04222

Exp number, first 60 AAs:

0.0001

Total prob of N-in:

0.00050

outside

1  -  468

 

 

Pi

200.35975

Theta

160.047951

Tajima's D

0.739947

CLR

0.374445

CSRT

0.584320783960802

Interpretation

Uncertain