SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06521  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011639
Annotation
enoyl-CoA_delta_isomerase_1_[Agrotis_segetum]
Location in the cell
Mitochondrial   Reliability : 1.995
 

Sequence

CDS
ATGTTTCCTCTTCGCCAAGTAATTGCAACTGTACGCTATACAACTCCAGCATTCCGATCAATGTCAGCAAGTACAGGTCCTTTAATAGACTTGGCAGTTGATAATGACGGTATAGCAACATTAACCATGCAGAGACCTCCGGTAAACAGTCTGAACTTGGAATTGTTAGATGCATTAGGCAAAGCACTTGATGATGTATCTAAAAACAAGTCCAGGGGCGTCGTCTTGACATCGTCATCACCTACAGTATTCTCTGCTGGTCTGGACATTATGGAGATGTACAAACCTGATATAAAAAGAGTTGAAACATTCTGGACAACATTACAAGAAGTCTGGCTTAAATTATTTGGATCCAACTACCCTACTGCTGCTGCAATTAATGGTCATGCACCTGCTGGTGGATGTCTCCTGTCAATGTCCTGTGAATACAGAGCTATGGTCACAGGGAAATACAACATTGGTTTGAATGAAACAGCATTGGGCATTGTTGCTCCAAAGTGGTTTATGGACACTATGTGTAATACTATATCTAAGAGAGAGGCTGAATATGCACTCACCACAGCTAGAATGTTCAACACTGATGAAGCATTGAAGGTGGGACTCATCGACGTTTTAGCTACAGACAAGGCTGATGCGGTTGATAAATGCAAGAAGTTTATAAAGAAATTCGACAAAATCTCGCCTATAGCTCGTGCTTTAACCAAGCAAAAGATCAGGGCAGAACCTTTGACGTGGCTCATCAAGAATCGTAAACAGGACACTGATGAGTTTTTAACTTTTGTACAGAACCCGAAAGTACAACAATCGTTAGAACTTTACATTCAAGCTCTCAAACAGAAATCTGCTAAATAA
Protein
MFPLRQVIATVRYTTPAFRSMSASTGPLIDLAVDNDGIATLTMQRPPVNSLNLELLDALGKALDDVSKNKSRGVVLTSSSPTVFSAGLDIMEMYKPDIKRVETFWTTLQEVWLKLFGSNYPTAAAINGHAPAGGCLLSMSCEYRAMVTGKYNIGLNETALGIVAPKWFMDTMCNTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVDKCKKFIKKFDKISPIARALTKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQKSAK

Summary

Similarity
Belongs to the enoyl-CoA hydratase/isomerase family.
EMBL
NWSH01002655    PCG67742.1    PCG67741.1    KZ149984    PZC75735.1    KJ622111    + More
AID66701.1    GU205161    ADB57048.1    BABH01012182    ODYU01006705    SOQ48787.1    KQ459590    KPI97246.1    KQ461161    KPJ08044.1    AGBW02003612    OWR55524.1    AK402098    BAM18720.1    KK853282    KDR09023.1    GFDL01012610    JAV22435.1    CH477314    EAT43826.1    DS232291    EDS39248.1    GECZ01029518    GECZ01025086    GECZ01021425    GECZ01007805    GECZ01007455    GECZ01007410    JAS40251.1    JAS44683.1    JAS48344.1    JAS61964.1    JAS62314.1    JAS62359.1    AXCM01015334    GAPW01003121    JAC10477.1    JXUM01070277    KQ562597    KXJ75516.1    AXCN02001968    APCN01001609    AAAB01008980    EAL39276.3    CH954177    EDV58423.1    GGFK01005807    MBW39128.1    CM000157    EDW88704.1    KRJ97985.1    CH963913    EDW77410.1    GGFM01003954    MBW24705.1    GFDG01000432    JAV18367.1    GGFJ01008119    MBW57260.1    GAMD01002287    JAA99303.1    UFQT01000822    SSX27393.1    ATLV01017759    KE525185    KFB42455.1    GFDG01000433    JAV18366.1    CH916368    EDW03560.1    CH479180    EDW28453.1    GGFM01007402    MBW28153.1    CH902620    EDV32227.1    GEZM01091399    JAV56854.1    OUUW01000010    SPP85644.1    AE014134    AY113635    BT015179    AAF52828.2    AAM29640.1    AAT94408.1    AGB92839.1    CP012523    ALC38333.1    CH379060    EAL33399.1    KRT03795.1    JRES01000384    KNC31757.1    CH480818    EDW52320.1    ADMH02000643    ETN65467.1    CM000361    CM002910    EDX04418.1    KMY89359.1    JXJN01016540    GALX01004143    JAB64323.1    GEDC01020889    JAS16409.1    CH940649    EDW64603.1    GANO01003110    JAB56761.1    KQ971321    EFA00648.1    CCAG010013819    EZ423443    ADD19719.1    CH933807    EDW12522.1    GBHO01039416    GBRD01001755    GBRD01001754    GDHC01007805    JAG04188.1    JAG64066.1    JAQ10824.1    AJVK01032138    GDKW01001451    JAI55144.1    ACPB03012545    GAHY01001146    JAA76364.1    GBBI01001189    JAC17523.1    NNAY01000041    OXU31627.1    GFDF01002489    JAV11595.1    GECL01002822    JAP03302.1    EDY69918.1    KRT03794.1    GFTR01004470    JAW11956.1    GBXI01015751    JAC98540.1    BT126719    KB631539    KB632107    AEE61681.1    ERL84357.1    ERL88881.1    GBGD01002471    JAC86418.1    EZ419753    ACY69926.1    SPP85643.1    KK854036    PTY09976.1    ABLF02019997    GAMC01003306    JAC03250.1    GBYB01013333    JAG83100.1    GAKP01012877    JAC46075.1    KK107078    QOIP01000011    EZA60296.1    RLU16951.1    GEBQ01021925    JAT18052.1    GDHF01033527    JAI18787.1    KQ414855    KOC60150.1    KQ978501    KYM93502.1    EDW88705.1   
Pfam
PF00378   ECH_1
Interpro
IPR029045   ClpP/crotonase-like_dom_sf        + More
IPR001753   Enoyl-CoA_hydra/iso       
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR018376   Enoyl-CoA_hyd/isom_CS       
SUPFAM
SSF52096   SSF52096       
Gene 3D
PDB
1XX4     E-value=2.72606e-51,     Score=509

Ontologies

Topology

Length:
283
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04704
Exp number, first 60 AAs:
0.00229
Total prob of N-in:
0.02592
outside
1  -  283
 
 

Population Genetic Test Statistics

Pi
17.856736
Theta
157.603315
Tajima's D
0.576217
CLR
0.438676
CSRT
0.532373381330933
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 VGLIDVLATDK 100.00 9e-05
28556443 YNIGLNETALGIVAPK 100.00 2e-04
26822097 FVIVMFDNDSIVQPK 100.00 0.003
26280517 WEYIPIGPFTAK 100.00 0.003
25044914 WFITVAHQPQVSAVVGSITICAAPPTYDPK 100.00 0.003
28467696 WFHIVSEGDIK 100.00 0.003
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