Gene

KWMTBOMO06520  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011846

Annotation

PREDICTED:_nuclear_envelope_phosphatase-regulatory_subunit_1_homolog_isoform_X2_[Papilio_polytes]

Location

Bomo_Chr11(-):9731578-9733199      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.049

CDS

ATGTCGCTCGAACAAACTGCTTGTGATGATTTGAAAGCTTTTGAGCGTCGTTTAACTGAAGTGATAGCATGTCTCCAACCAGCTACAATGAGATGGAGAATTCTACTGACAATTGTGTCAGTTTGTACAGCAATAGCAGCATACCATTGGTTGATGGATCCTCTGACACCTGTAGTCTCGCTCACACAGTCTTTGTGGAATCATCCCTTTTTTGCTGTGACCTCTACATTATTGGTTTTGCTATTCATGATTGGAGTACATAGAAAGGTAGTGGCTCCTAGCATCATCACAGCGCGCACTCGCTCCATACTTAATGACTTCAACATGTCTTGTGACGATACTGGCAAACTTATTCTGAAGCCGAGACCAGCAAATAGCTCATTATTTTAA

Protein

MSLEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRPANSSLF

Uniprot

H9JQP0   A0A2W1BSW7   A0A2A4J893   A0A2H1W758   S4PGX4   A0A0N1IF38   + More
A0A3S2M879   A0A212EUL2   A0A194Q1G9   A0A067RF25   A0A1B6KGL0   A0A1B6GZN5   A0A1B6JUI5   A0A0A9X313   A0A087ZTV5   A0A0L7QR06   A0A1B6D043   A0A154PLY2   A0A151IPL5   F4WA11   A0A1W4XWD9   A0A195DL78   A0A158P1C5   A0A0N7Z925   E2C0Q1   A0A026WZH1   A0A2P8Z963   A0A0J7L9M3   E2ATX0   A0A151K0I2   A0A0A9Y6X5   A0A151I2N0   A0A1W4XVH7   A0A158P1C4   N6TDF9   A0A151XH29   A0A0P4WHS1   E9HPY5   A0A0P5FKR7   A0A1B6C3Z3   D6WGC4   A0A146L1Q9   J3JYQ7   A0A0T6AZY7   A0A131X974   A0A023GDT6   G3MN05   A0A3L8DTW0   A0A224YWR2   A0A131Z182   L7M696   A0A1E1WX25   A0A0M8ZXQ6   B7P2W4   V5HDZ1   A0A2R5LF16   Q175U5   A0A023EDS2   B0WT63   A0A087T1K7   A0A224XX37   A0A0V0G8W5   A0A161MLF7   A0A3S3NY71   A0A1Q3F4N3   A0A1L8DKE0   A0A1Q3G1S7   L7LTX7   A0A1B0FC39   A0A1A9Y9J0   A0A1A9VYG7   A0A1B0B9D6   A0A1S3D511   A0A0K8TND7   B4N6Q2   G1N0H6   K7FW56   A0A1D5PB80   H3ATG7   A0A3Q3JXP3   A0A1A9Z3I0   B5X8R3   A0A3B3X6K8   A0A0S7LXP9   M4APW3   A0A087YAV5   A0A3B3U920   A0A3P9NME3   A0A2Y9LMH4   A0A0L0BT94   A0A1D2MKT6   G1P823   A0A1W4UI11   Q6XHR6   I3J401   A0A3Q2DF85   A0A2I4DA22   A0A3Q2ZT27   A0A1A7Z5G9   G3PWW0  

Pubmed

19121390    28756777    23622113    26354079    22118469    24845553    + More
25401762    26823975    21719571    21347285    27129103    20798317    24508170    29403074    23537049    21292972    18362917    19820115    22516182    28049606    22216098    30249741    28797301    26830274    25576852    28503490    25765539    17510324    24945155    26483478    26369729    17994087    20838655    17381049    15592404    9215903    20433749    23542700    26108605    27289101    21993624    14525923    17550304    25186727   

EMBL

BABH01012183    KZ149984    PZC75736.1    NWSH01002655    PCG67744.1    ODYU01006705    + More
SOQ48786.1    GAIX01006020    JAA86540.1    KQ461161    KPJ08043.1    RSAL01000010    RVE53692.1    AGBW02012350    OWR45182.1    KQ459590    KPI97245.1    KK852729    KDR17573.1    GEBQ01029379    JAT10598.1    GECZ01001889    JAS67880.1    GECU01004845    JAT02862.1    GBHO01030456    GBHO01025333    GBHO01025331    GBHO01025165    GBRD01005987    GDHC01003772    JAG13148.1    JAG18271.1    JAG18273.1    JAG18439.1    JAG59834.1    JAQ14857.1    KQ414784    KOC61062.1    GEDC01018345    JAS18953.1    KQ434973    KZC12767.1    KQ976836    KYN07971.1    GL888037    EGI68941.1    KQ980762    KYN13592.1    ADTU01006224    GDKW01001731    JAI54864.1    GL451846    EFN78445.1    KK107054    EZA61470.1    PYGN01000141    PSN53037.1    LBMM01000186    KMR04553.1    GL442747    EFN63101.1    KQ981250    KYN44209.1    GBHO01025329    GBHO01025166    GBHO01025164    GBHO01014782    GDHC01020586    JAG18275.1    JAG18438.1    JAG18440.1    JAG28822.1    JAP98042.1    KQ976535    KYM81452.1    APGK01034685    APGK01034686    KB740914    KB632352    ENN78404.1    ERL93284.1    KQ982138    KYQ59667.1    GDRN01049513    JAI66548.1    GL732712    EFX66204.1    GDIQ01256810    GDIQ01254017    LRGB01002190    JAJ97707.1    KZS08737.1    GEDC01029076    GEDC01017934    JAS08222.1    JAS19364.1    KQ971329    EFA01129.2    GDHC01016145    JAQ02484.1    BT128387    AEE63345.1    LJIG01016425    KRT80641.1    GEFH01004497    JAP64084.1    GBBM01003419    JAC31999.1    JO843256    AEO34873.1    QOIP01000004    RLU23603.1    GFPF01010219    MAA21365.1    GEDV01004341    JAP84216.1    GACK01006420    JAA58614.1    GFAC01007599    JAT91589.1    KQ435831    KOX71709.1    ABJB010695952    DS624854    EEC00936.1    GADI01003008    GANP01002643    GEFM01006104    JAA70800.1    JAB81825.1    JAP69692.1    GGLE01003943    MBY08069.1    CH477395    EAT41860.1    JXUM01029023    JXUM01029024    JXUM01098606    JXUM01098607    JXUM01098608    GAPW01005871    GAPW01005870    KQ564434    KQ560839    JAC07728.1    KXJ72286.1    KXJ80666.1    DS232080    EDS34206.1    KK112982    KFM58996.1    GFTR01001958    JAW14468.1    GECL01001580    JAP04544.1    GEMB01002365    JAS00818.1    NCKU01005766    RWS04185.1    GFDL01012520    JAV22525.1    GFDF01007239    JAV06845.1    GFDL01001293    JAV33752.1    GACK01010686    JAA54348.1    CCAG010016063    JXJN01010368    GDAI01001696    JAI15907.1    CH964161    EDW80041.1    AGCU01072717    AGCU01072718    AADN05000558    AFYH01073018    BT047432    ACI67233.1    GBYX01139950    JAO94238.1    AYCK01004723    JRES01001499    KNC22419.1    LJIJ01000964    ODM93521.1    AAPE02057183    AY232117    CM000159    AAR10140.1    EDW94025.1    AERX01000137    HADW01014257    HADX01015364    SBP37596.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000007151    UP000053268    + More
UP000027135    UP000005203    UP000053825    UP000076502    UP000078542    UP000007755    UP000192223    UP000078492    UP000005205    UP000008237    UP000053097    UP000245037    UP000036403    UP000000311    UP000078541    UP000078540    UP000019118    UP000030742    UP000075809    UP000000305    UP000076858    UP000007266    UP000279307    UP000053105    UP000001555    UP000008820    UP000069940    UP000249989    UP000002320    UP000054359    UP000285301    UP000092444    UP000092443    UP000078200    UP000092460    UP000079169    UP000007798    UP000001645    UP000007267    UP000000539    UP000008672    UP000261600    UP000092445    UP000261480    UP000002852    UP000028760    UP000261500    UP000242638    UP000248483    UP000037069    UP000094527    UP000001074    UP000192221    UP000002282    UP000005207    UP000265020    UP000192220    UP000264800    UP000007635   

PRIDE

H9JQP0   

Pfam

PF09771   Tmemb_18A

Interpro

IPR019168   NEP1-R1       

ProteinModelPortal

H9JQP0   A0A2W1BSW7   A0A2A4J893   A0A2H1W758   S4PGX4   A0A0N1IF38   + More
A0A3S2M879   A0A212EUL2   A0A194Q1G9   A0A067RF25   A0A1B6KGL0   A0A1B6GZN5   A0A1B6JUI5   A0A0A9X313   A0A087ZTV5   A0A0L7QR06   A0A1B6D043   A0A154PLY2   A0A151IPL5   F4WA11   A0A1W4XWD9   A0A195DL78   A0A158P1C5   A0A0N7Z925   E2C0Q1   A0A026WZH1   A0A2P8Z963   A0A0J7L9M3   E2ATX0   A0A151K0I2   A0A0A9Y6X5   A0A151I2N0   A0A1W4XVH7   A0A158P1C4   N6TDF9   A0A151XH29   A0A0P4WHS1   E9HPY5   A0A0P5FKR7   A0A1B6C3Z3   D6WGC4   A0A146L1Q9   J3JYQ7   A0A0T6AZY7   A0A131X974   A0A023GDT6   G3MN05   A0A3L8DTW0   A0A224YWR2   A0A131Z182   L7M696   A0A1E1WX25   A0A0M8ZXQ6   B7P2W4   V5HDZ1   A0A2R5LF16   Q175U5   A0A023EDS2   B0WT63   A0A087T1K7   A0A224XX37   A0A0V0G8W5   A0A161MLF7   A0A3S3NY71   A0A1Q3F4N3   A0A1L8DKE0   A0A1Q3G1S7   L7LTX7   A0A1B0FC39   A0A1A9Y9J0   A0A1A9VYG7   A0A1B0B9D6   A0A1S3D511   A0A0K8TND7   B4N6Q2   G1N0H6   K7FW56   A0A1D5PB80   H3ATG7   A0A3Q3JXP3   A0A1A9Z3I0   B5X8R3   A0A3B3X6K8   A0A0S7LXP9   M4APW3   A0A087YAV5   A0A3B3U920   A0A3P9NME3   A0A2Y9LMH4   A0A0L0BT94   A0A1D2MKT6   G1P823   A0A1W4UI11   Q6XHR6   I3J401   A0A3Q2DF85   A0A2I4DA22   A0A3Q2ZT27   A0A1A7Z5G9   G3PWW0  

KEGG

101739088    no KO assigned | (RefSeq) nuclear envelope phosphatase-regulatory subunit 1-like

GO

GO:0071595   GO:0016021   GO:0035307   GO:0010867   GO:0034504   GO:0005829   GO:0031965   GO:0008270   GO:0020037   GO:0006259   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

Length:

129

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

41.44779

Exp number, first 60 AAs:

19.73781

Total prob of N-in:

0.97195

POSSIBLE N-term signal

sequence

inside

1  -  31

TMhelix

32  -  50

outside

51  -  64

TMhelix

65  -  87

inside

88  -  129

 

 

Pi

265.774065

Theta

172.654102

Tajima's D

1.455539

CLR

0.307493

CSRT

0.776161191940403

Interpretation

Uncertain