SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06516
Pre Gene Modal
BGIBMGA011638
Annotation
PREDICTED:_protein_FAM49A_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.556
 

Sequence

CDS
ATGGGAAAATTATTGAGTCTTTTATCGCGTGACGAGTCGCATTGCTGCTCGTCGCCTCGATATGATATATTCTTGGATTTCGAGAATGCCGCGCCCACAATGACCGAACGCGATGTTTACGACGATGTCCAAAGAGTCCTGTTAGAATCCGAGAAGATATTAGAAGAGATACAGTGTTATAAAGGTGCCGGGAAAGAGATAAGAGAAGCTATAGCAGATCCATCGAGGATATCCCAGGAGCGTGCTTGGCGCGCTGTGAAACCCCTCGTAGATAAACTACTGTGCTGCTACAACCACTCCCTTAAGCTTCAAAGGGTGGTGCCCCGATTGCTGGGTTCCCTAGTGGGAGGTGCAATGAGTCCCACGCAACACCTTGAACAACAACAAGCTCTTGTCAAGCAGTTCGCGGAGATACTGGAGTTCGTTTTGAAATTCGACGAATATAAAATGAAAACTCCGGCGATACAGAACGACTTCAGCTACTACAGGCGAAGCGTTTCGAGAGGTGGCATCATTAATTCGGACCTCCCACCGGGCGAGGAGCCTCACATAACCGCAGAGGTCGCCAACAGAATGTCATTGTTCTACGCTCAAGCCACTCCGATGTTGAAGGTGTTGTCCGAAGCCACTAGTCAATTCGTCAATGATAATCAACAGGACTTGGAGAATACAACTGAAACACTCAGCACGATGGCAAAAGTGTGCTTGAGGATGCTTGAGAATCCGTAA
Protein
MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLKLQRVVPRLLGSLVGGAMSPTQHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQNDFSYYRRSVSRGGIINSDLPPGEEPHITAEVANRMSLFYAQATPMLKVLSEATSQFVNDNQQDLENTTETLSTMAKVCLRMLENP

Summary

EMBL
ODYU01006705    SOQ48785.1    KZ149984    PZC75737.1    KQ459590    KPI97244.1    + More
AGBW02012350    OWR45181.1    GFDF01010516    JAV03568.1    AJWK01001332    AJWK01001333    JRES01001499    KNC22434.1    CH379069    EAL29515.2    CH479214    EDW33467.1    CH940647    EDW70199.1    KRF84782.1    KRF84783.1    KRF84784.1    CH933809    EDW19523.1    CM000159    EDW94027.1    KRK01625.1    OUUW01000002    SPP76702.1    CM002912    KMY98862.1    AE014296    AY069073    AAF50143.2    AAL39218.1    CP012525    ALC43776.1    CH480815    EDW40995.1    CH902618    EDV40631.1    KA648042    AFP62671.1    CH916366    EDV96920.1    CH954178    EDV51319.1    ATLV01011191    KE524650    KFB35928.1    AAAB01008960    EAA11691.4    GGFM01005647    MBW26398.1    GGFK01009235    MBW42556.1    GGFJ01007385    MBW56526.1    ADMH02000523    ETN66117.1    GAMC01008624    GAMC01008623    GAMC01008622    GAMC01008621    GAMC01008620    JAB97931.1    GAPW01003016    JAC10582.1    GBXI01005652    JAD08640.1    GDHF01032777    GDHF01028646    GDHF01023975    GDHF01001794    JAI19537.1    JAI23668.1    JAI28339.1    JAI50520.1    GAKP01011882    GAKP01011877    JAC47070.1    GDHF01024049    JAI28265.1    GDHF01026732    JAI25582.1    CH964161    EDW80039.1    GECU01036842    JAS70864.1    CVRI01000014    CRK89689.1    GFDL01003937    JAV31108.1    GEDC01012825    JAS24473.1    KK852729    KDR17574.1    NEVH01016301    PNF25849.1    KQ435012    KZC13845.1    GL452660    EFN77033.1    KQ977185    KYN05072.1    KQ980801    KYN12803.1    KQ981905    KYN33427.1    KQ982130    KYQ59729.1    GL888680    EGI58457.1    LBMM01000636    KMQ97934.1    ADTU01007576    ADTU01007577    ADTU01007578    ADTU01007579    ADTU01007580    GL444953    EFN60432.1    GECL01000304    JAP05820.1    GL764554    EFZ17476.1    KK107231    EZA55042.1    KQ976432    KYM87498.1    QOIP01000009    RLU19147.1    JR039571    JR039572    AEY58760.1    AEY58761.1    GBYB01006918    GBYB01007251    GBYB01013897    JAG76685.1    JAG77018.1    JAG83664.1    KQ762748    OAD55527.1    DS235863    EEB19314.1    KQ435743    KOX76633.1    KZ288237    PBC31375.1    UFQT01001604    UFQT01003453    SSX31139.1    SSX35011.1    KQ414788    KOC60784.1    ACPB03023528    GBHO01032090    GBHO01012956    GBHO01012954    GBRD01014974    JAG11514.1    JAG30648.1    JAG30650.1    JAG50852.1    QCYY01002053    ROT73203.1    LJIJ01000785    ODM94581.1    GL732541    EFX81995.1    PNF25850.1    GDRN01037564    JAI67293.1    LRGB01002121    KZS09041.1    CAEY01000674    ABJB010214838    ABJB010376468    ABJB010572392    ABJB010794780    ABJB010886813    ABJB010902736    ABJB010960973    DS800768    EEC10662.1    CM000363    EDX09981.1    NNAY01000131    OXU30684.1    GGLE01006274    MBY10400.1    AXCN02000928    AXCM01001307    CH477395    EAT41866.1    GEFM01004499    JAP71297.1    GFPF01004669    MAA15815.1    GEDV01003267    JAP85290.1   
Pfam
PF07159   DUF1394
Interpro
IPR009828   DUF1394        + More
IPR039789   FAM49       

Ontologies

Topology

Length:
242
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00114
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01064
outside
1  -  242
 
 

Population Genetic Test Statistics

Pi
183.757598
Theta
160.916454
Tajima's D
0.432297
CLR
0.097946
CSRT
0.492925353732313
Interpretation
Uncertain
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