Gene

KWMTBOMO06511

Annotation

C-type_lectin_-_mannose_binding_[Papilio_xuthus]

Location

Bomo_Chr11(+):9592960-9607846      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.633

CDS

ATGTTGCAAAATAGTATACTGTTCGTTAGTGTTCTACTGATGTGTTGGGTGGGTGAAACGAAGACGGTCGCCAGCTACAACCAGCCACCTGCAATCGGAAAAACAGAATGCTCAACGTGTGGTGACGACGAACTTGGCATTACACGATGGACAATGCCTTTACTAAAAAGCGGAGAAAAACGATATTATTTAGGAATATTCTTCAAGGTCGGCTCGGAAAGAAGAGTACATTTTTACCGCGTTTAA

Protein

MLQNSILFVSVLLMCWVGETKTVASYNQPPAIGKTECSTCGDDELGITRWTMPLLKSGEKRYYLGIFFKVGSERRVHFYRV

Uniprot

A0A1E1WHX5   I4DJ91   A0A0N1I522   A0A212EUK9   A0A219YXJ8   D7EJZ5   + More
A0A1B6CQC0   A0A1A9XXB2   A0A1V1FN68   A0A1B6EW47   A0A1A9W4K6   A0A0K8UG01   A0A0K8V5W1   A0A3F2YSK9   A7UTL4   A0A2C9GWR9   T1GGF4   A0A182JFN1   A0A0A1WZC5   A0A0Q9WU37   J9HTH4   A0A026WEP8   A0A034WLM5   A0A023EJ40   A0A0Q9XBR9   W8AQZ3   A0A1W4W6R7   A0A3F2YQ66   A0A0P9AJR5   A0A0J9UBV7   C4WSV5   Q9W0I2   A0A0Q5U1Q2   A0A0R1DZU7   B4H5K3   A0A1W4VVQ2  

Pubmed

22651552    26354079    22118469    18362917    19820115    28410430    + More
12364791    14747013    17210077    25830018    17994087    17510324    24508170    30249741    25348373    24945155    24495485    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

GDQN01004465    JAT86589.1    AK401359    KQ459590    BAM17981.1    KPI97242.1    + More
KQ461161    KPJ08038.1    AGBW02012350    OWR45178.1    KX550119    AQY54436.1    KQ972213    EFA12925.2    GEDC01021697    JAS15601.1    FX985237    BAX07250.1    GECZ01027641    JAS42128.1    GDHF01026783    JAI25531.1    GDHF01024635    GDHF01018073    JAI27679.1    JAI34241.1    APCN01004435    AAAB01008960    EDO63644.1    CAQQ02391785    GBXI01016144    GBXI01010090    GBXI01000584    JAC98147.1    JAD04202.1    JAD13708.1    CH940647    KRF84350.1    CH477779    EJY57928.1    KK107242    QOIP01000001    EZA54542.1    RLU26875.1    GAKP01003720    JAC55232.1    GAPW01004759    JAC08839.1    CH933809    KRG05984.1    GAMC01015301    GAMC01015300    GAMC01015299    GAMC01015298    JAB91255.1    CH902618    KPU78073.1    CM002912    KMY96780.1    AK340350    BAH70975.1    AE014296    BT012477    AAF47464.1    AAN11467.1    AAS93748.1    CH954178    KQS43055.1    CM000159    KRK00724.1    CH479211    EDW33055.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000007266    UP000092443    UP000091820    + More
UP000075840    UP000007062    UP000075900    UP000015102    UP000075880    UP000008792    UP000008820    UP000053097    UP000279307    UP000009192    UP000192221    UP000069272    UP000007801    UP000000803    UP000008711    UP000002282    UP000008744   

PRIDE

Q9W0I2   

Pfam

PF00059   Lectin_C

Interpro

IPR016186   C-type_lectin-like/link_sf        + More
IPR001304   C-type_lectin-like       
IPR018378   C-type_lectin_CS       
IPR016187   CTDL_fold       

SUPFAM

SSF56436   SSF56436       

Gene 3D

3.10.100.10    

ProteinModelPortal

A0A1E1WHX5   I4DJ91   A0A0N1I522   A0A212EUK9   A0A219YXJ8   D7EJZ5   + More
A0A1B6CQC0   A0A1A9XXB2   A0A1V1FN68   A0A1B6EW47   A0A1A9W4K6   A0A0K8UG01   A0A0K8V5W1   A0A3F2YSK9   A7UTL4   A0A2C9GWR9   T1GGF4   A0A182JFN1   A0A0A1WZC5   A0A0Q9WU37   J9HTH4   A0A026WEP8   A0A034WLM5   A0A023EJ40   A0A0Q9XBR9   W8AQZ3   A0A1W4W6R7   A0A3F2YQ66   A0A0P9AJR5   A0A0J9UBV7   C4WSV5   Q9W0I2   A0A0Q5U1Q2   A0A0R1DZU7   B4H5K3   A0A1W4VVQ2  

KEGG

101739843    no KO assigned | (RefSeq) C-type lectin domain family 4 member F

GO

GO:0030246  

SignalP

Position:   1 - 20,         Likelihood:  0.993298

 

 

Length:

81

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.63316

Exp number, first 60 AAs:

0.631179999999999

Total prob of N-in:

0.13674

outside

1  -  81

 

 

Pi

255.326098

Theta

168.2567

Tajima's D

1.602964

CLR

0.475688

CSRT

0.801709914504275

Interpretation

Uncertain