Gene

KWMTBOMO06509  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011848

Annotation

Regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_[Operophtera_brumata]

Location

Bomo_Chr11(-):9529224-9533879      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.048

CDS

ATGGCTGGATTTACTGAAAATGCATTGGTGCGGAAACTTCAAGATTTAAATTCTAGTCAACAAAGTATTCAAACATTATCTTTGTGGTTAATTCATCATAGAAAACACCACGCTGCCGTTGTTAAAACTTGGCTAAAAGAATTACTTAAAGCCAAAGACAGTAAACAACTCACATTCATGTATCTTGCTAATGATGTAATACAAAACAGTAAGAAAAAGGGACCTGAATATGGAAAGGAGTTTGGGGAAGTTCTTGTAGAATCATTTCAACATATGGCCAAAACTGGAATGGAATCTAAAACAAAGCATTCCTTGCATAGAATATTGAAGATATGGGAAGAAAGAGGTGTATATGATGCAGAAAAAATTAAGGACTTTAAAGATGCTATTGCTGGCATCGAAGCACCCGTCACTCCGAGCAAAGTTAGCAAACGTAAATCGACTGATACAGAACTTAAGGAGTCTACCAAAAAACATAAAATAGAATCTAGATCTAAGACTGAACGAAGAAGAAGCGAGACAAAAGTTGAAGTTGACGGGCAAATAGAAACCCATACGACGTTGAGTCCTAAAACACCTCCTGGAGACCCACCAGAGCCTGAAGAGTTGATTAAGGCTCTTTTAGAATTAGAATCAAGTGCATCCAGTGATGAAGCTGTCAGAGAACGTATTGCATCTCTGCCTCCTGAGGTCTCTGAAGTTCAGTTATTATCTAAATTAGAAGATAAAGAATCTGCCCTGAGCCTAAGTGCAGTAGTGAATTCAGCAGTAGAATTACTAGCTGAGTATAACTTGAGGCTAACTGAAGAGTTAGAGAAGAGAAGGAAAGTGGCTGGAATGTTAAGGGACTTTGCACAAGCACAGCGGGACCTTGCTAAACAGGCAGAAACTAGATTAGAGGAATACAATGTGAAACTCCAAAAAATATATGCAGTCAAAGCCGAAGTGAAGCATCATATTGAGAACCTCCCTGACGTGTCTCGCTTACCGGACGTAACCGGAGGCCTCGCGCCCCTTCCCTCCGCCGGCGACCTGTTCAGTGTCTGA

Protein

MAGFTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDSKQLTFMYLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDAEKIKDFKDAIAGIEAPVTPSKVSKRKSTDTELKESTKKHKIESRSKTERRRSETKVEVDGQIETHTTLSPKTPPGDPPEPEELIKALLELESSASSDEAVRERIASLPPEVSEVQLLSKLEDKESALSLSAVVNSAVELLAEYNLRLTEELEKRRKVAGMLRDFAQAQRDLAKQAETRLEEYNVKLQKIYAVKAEVKHHIENLPDVSRLPDVTGGLAPLPSAGDLFSV

Uniprot

A0A1E1WRI8   A0A2H1X1L8   A0A2A4K6Y7   A0A2W1BSX8   A0A3S2P6P0   A0A194Q1G5   + More
A0A0N0PAT6   A0A0L7LK50   H9JQP2   A0A212FIL2   A0A067R5X5   A0A182GT38   A0A0T6AXV7   W5JLS2   Q17B05   A0A2M4AMV7   A0A182FHA7   Q17AW6   A0A2M4BSH3   E0VLV7   A0A182J4F4   A0A0C9RJ39   A0A151XGY8   A0A1B0CTA1   A0A1B6EQD8   A0A026X0D8   A0A310SFM4   A0A182Q621   A0A0L7QRD5   A0A087ZTW4   A0A182WAJ8   F4WA10   U5EYY9   A0A1B6LCA5   A0A1A9W7J5   A0A182RX31   A0A2A4K7P5   A0A151K0H1   A0A158P1C6   A0A1B6K9V3   A0A182PGF4   E2ATW9   A0A182M011   A0A151I2R3   E2C0Q2   A0A1L8DHA9   J9JMU0   A0A182TGD9   A0A1Y1LGU9   A0A1Y1LEL1   A0A182HMH3   A0A182YPZ3   K7J7J8   A0A182V8V8   A0A182XD39   Q5TRR3   A0A1B0F9T3   A0A1A9Z4J6   A0A1A9XHG9   A0A1B0AKI3   A0A182JUZ1   A0A182N7Y2   A0A1A9VEC3   A0A0A1WLI1   D7EJZ6   A0A0K8TRL2   A0A0M8ZV19   W8C632   A0A1J1I5T3   E9IQ44   A0A1B6CGB5   A0A0A9X6Z8   A0A2A3EEB8   A0A0V0G960   A0A069DS53   A0A224XRH2   A0A0P4VP66   T1HQ06   A0A293LG32   A0A1I8M703   T1P8I2   U4UF41   A0A2R5LKC1   A0A2L2XYV2   Q9W039   N6SUR8   E9GMT1   B3NBF5   B4QN41   B4HW58   A0A0N7ZBV2   A0A164QLS6   A0A182KW10   A0A3S1B5U2   A0A0P5QT33   A0A1B0DJD6   A0A1S3DS15   A0A0P5K1X3   A0A0P6ADU3  

Pubmed

28756777    26354079    26227816    19121390    22118469    24845553    + More
26483478    20920257    23761445    17510324    20566863    24508170    21719571    21347285    20798317    28004739    25244985    20075255    12364791    14747013    17210077    25830018    18362917    19820115    26369729    24495485    21282665    25401762    26823975    26334808    27129103    25315136    23537049    26561354    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21292972    17994087    22936249    20966253   

EMBL

GDQN01001446    JAT89608.1    ODYU01012302    SOQ58544.1    NWSH01000063    PCG80035.1    + More
KZ149984    PZC75746.1    RSAL01000010    RVE53697.1    KQ459590    KPI97240.1    KQ461161    KPJ08036.1    JTDY01000881    KOB75571.1    BABH01012197    AGBW02008365    OWR53569.1    KK852721    KDR17745.1    JXUM01017743    JXUM01017744    KQ560492    KXJ82135.1    LJIG01022553    KRT79961.1    ADMH02001057    ETN64253.1    CH477327    EAT43465.1    GGFK01008793    MBW42114.1    CH477329    EAT43405.1    GGFJ01006802    MBW55943.1    DS235281    EEB14363.1    GBYB01013247    JAG83014.1    KQ982138    KYQ59666.1    AJWK01027321    GECZ01029639    JAS40130.1    KK107054    EZA61471.1    KQ761834    OAD56696.1    AXCN02000907    KQ414784    KOC61061.1    GL888037    EGI68940.1    GANO01000012    JAB59859.1    GEBQ01018649    JAT21328.1    PCG80036.1    KQ981250    KYN44210.1    ADTU01006225    GEBQ01031757    JAT08220.1    GL442747    EFN63100.1    AXCM01002609    KQ976535    KYM81451.1    GL451846    EFN78446.1    GFDF01008350    JAV05734.1    ABLF02025631    GEZM01057946    JAV72078.1    GEZM01057945    JAV72079.1    APCN01004435    AAZX01002754    AAZX01004357    AAZX01007032    AAZX01009286    AAZX01010985    AAZX01013235    AAZX01015887    AAZX01019478    AAAB01008960    EAL39798.2    CCAG010018360    JXJN01025783    GBXI01015039    JAC99252.1    DS497723    EFA12923.1    GDAI01000822    JAI16781.1    KQ435831    KOX71710.1    GAMC01004519    JAC02037.1    CVRI01000042    CRK95653.1    GL764659    EFZ17354.1    GEDC01024761    GEDC01014082    JAS12537.1    JAS23216.1    GBHO01027840    GBRD01005420    GDHC01001242    JAG15764.1    JAG60401.1    JAQ17387.1    KZ288268    PBC30058.1    GECL01001828    JAP04296.1    GBGD01002026    JAC86863.1    GFTR01005284    JAW11142.1    GDKW01001810    JAI54785.1    ACPB03013600    GFWV01002963    MAA27693.1    KA644957    AFP59586.1    KB632330    ERL92594.1    GGLE01005752    MBY09878.1    IAAA01008782    LAA00867.1    AE014296    AAF47620.1    APGK01055682    KB741269    ENN71434.1    GL732553    EFX79235.1    CH954178    EDV50277.1    CM000363    CM002912    EDX08923.1    KMY97059.1    CH480817    EDW50173.1    GDRN01077862    JAI62680.1    LRGB01002384    KZS07867.1    RQTK01000383    RUS80586.1    GDIQ01112692    GDIP01063814    JAL39034.1    JAM39901.1    AJVK01034943    GDIQ01192010    JAK59715.1    GDIP01032096    JAM71619.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000053240    UP000037510    UP000005204    + More
UP000007151    UP000027135    UP000069940    UP000249989    UP000000673    UP000008820    UP000069272    UP000009046    UP000075880    UP000075809    UP000092461    UP000053097    UP000075886    UP000053825    UP000005203    UP000075920    UP000007755    UP000091820    UP000075900    UP000078541    UP000005205    UP000075885    UP000000311    UP000075883    UP000078540    UP000008237    UP000007819    UP000075902    UP000075840    UP000076408    UP000002358    UP000075903    UP000076407    UP000007062    UP000092444    UP000092445    UP000092443    UP000092460    UP000075881    UP000075884    UP000078200    UP000007266    UP000053105    UP000183832    UP000242457    UP000015103    UP000095301    UP000030742    UP000000803    UP000019118    UP000000305    UP000008711    UP000000304    UP000001292    UP000076858    UP000075882    UP000271974    UP000092462    UP000079169   

PRIDE

H9JQP2    Q9W039   

Pfam

PF16566   CREPT        + More
PF04818   CTD_bind

Interpro

IPR032337   CREPT        + More
IPR006569   CID_dom       
IPR006903   RNA_pol_II-bd       
IPR008942   ENTH_VHS       

SUPFAM

SSF48464   SSF48464       

Gene 3D

1.25.40.90    

CDD

cd03562  CID

ProteinModelPortal

A0A1E1WRI8   A0A2H1X1L8   A0A2A4K6Y7   A0A2W1BSX8   A0A3S2P6P0   A0A194Q1G5   + More
A0A0N0PAT6   A0A0L7LK50   H9JQP2   A0A212FIL2   A0A067R5X5   A0A182GT38   A0A0T6AXV7   W5JLS2   Q17B05   A0A2M4AMV7   A0A182FHA7   Q17AW6   A0A2M4BSH3   E0VLV7   A0A182J4F4   A0A0C9RJ39   A0A151XGY8   A0A1B0CTA1   A0A1B6EQD8   A0A026X0D8   A0A310SFM4   A0A182Q621   A0A0L7QRD5   A0A087ZTW4   A0A182WAJ8   F4WA10   U5EYY9   A0A1B6LCA5   A0A1A9W7J5   A0A182RX31   A0A2A4K7P5   A0A151K0H1   A0A158P1C6   A0A1B6K9V3   A0A182PGF4   E2ATW9   A0A182M011   A0A151I2R3   E2C0Q2   A0A1L8DHA9   J9JMU0   A0A182TGD9   A0A1Y1LGU9   A0A1Y1LEL1   A0A182HMH3   A0A182YPZ3   K7J7J8   A0A182V8V8   A0A182XD39   Q5TRR3   A0A1B0F9T3   A0A1A9Z4J6   A0A1A9XHG9   A0A1B0AKI3   A0A182JUZ1   A0A182N7Y2   A0A1A9VEC3   A0A0A1WLI1   D7EJZ6   A0A0K8TRL2   A0A0M8ZV19   W8C632   A0A1J1I5T3   E9IQ44   A0A1B6CGB5   A0A0A9X6Z8   A0A2A3EEB8   A0A0V0G960   A0A069DS53   A0A224XRH2   A0A0P4VP66   T1HQ06   A0A293LG32   A0A1I8M703   T1P8I2   U4UF41   A0A2R5LKC1   A0A2L2XYV2   Q9W039   N6SUR8   E9GMT1   B3NBF5   B4QN41   B4HW58   A0A0N7ZBV2   A0A164QLS6   A0A182KW10   A0A3S1B5U2   A0A0P5QT33   A0A1B0DJD6   A0A1S3DS15   A0A0P5K1X3   A0A0P6ADU3  

PDB

4NAC     E-value=7.77363e-34,     Score=359

KEGG

101740071    K15559 regulator of Ty1 transposition protein 103 | (RefSeq) regulation of nuclear pre-mRNA domain-c

GO

GO:0031124   GO:0000993   GO:0016591  

Length:

348

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00279

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00592

outside

1  -  348

 

 

Pi

187.292111

Theta

171.870463

Tajima's D

0.096106

CLR

0.460773

CSRT

0.404179791010449

Interpretation

Uncertain