Silkworm Genome Informatics Database

Gene

KWMTBOMO06507 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011631

Annotation

hypothetical_protein_KGM_16487_[Danaus_plexippus]

Location

Bomo_Chr11(+):9495350-9506316 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.672

CDS

ATGGTGAATAGTAACAATCTAAAGGGAAGAAACGCCATGGATTTGATGAAAACGGAATATGAGTTCCTAGACTTGTCTGATGTGAAGGGAGCAGACCTGAGCAGTCTGCAGTGTGCACTATTTGAAAATAAATTGGACTCCGCTGCGGCCCATACCGTTGGTCGCACGAAACCTGCAATAGGTGGATCCTCTGGTGCGAGCAAAGTGGGAATTCCGACCGTGTCGAACAGCGTGGATAGTCTGTCGGGCGGCGAGGGCGAGATGGCGCCTCACTCGCCGGCGCGGAGTGGTGCCGGGCCGGCCCCTCACCCGCCGCCCTACGCTCAACCTCCACCCACTTATCCACCACCGCACGCGCAATGGCCTGTAGCACCACCCAACGTGTACGTGAGCCAGGTCACCGCGAATGTCAACGTACACGGTTATATGGGCCAGTACTATCAACCGCCCACGCCACAGTATGTCCCATCAACGCAGGAACGTGCTCCTCGTACCAATCGACGGGACCGACGCGGCAAGCGGCAGCCATCACCCCCCTCTCATCAACCCCAACCATACTATTTACAGTACCCGCAATATTATCCGGCTGCACAAGCGCAGGGCGCTCCCCTTTACCACTTGCCTTTTTATCAACCTTTAGTGTATGGACCATACACATACCCTCCATATTATCCAGAGTACCCAATGCCTGTAGAAGGAGATGCCGAGAAAGGCCCAGAAGAATATCCACCTGAAGTAGTGATGGAACAAGAAACAGTTGATGCTTATTATGCTAGTGCTCATTATGCCGCTCCACCTTACGGGCCACCAGTAGAAGGAGCCGTGGAATACGTCCCGCCGCTTTACTTACCTACTCCTCACCATCCGCCACCGTTGCAGCCTCCTCCTCATCACCACCATACCCCGCATCAGTTCAACGTCCACGCCAAGAACTTTGTACAAGGTCAGGGCAGAAATTATACACCAGTTGACAAAACACCAGAACGTCGTACGCCGCCAACTGCGACCGCTTCCGCGAACGTTGATGGGCTTCCCATTAAAGATCTTAAAATAGCAAACAAAGGGCCCAACAGTCCCAAGCAAAATGAAAAATCGATAGAGATCAGTCAGGTAAAACAAGTTCCTTCTATGGTAGATAAAGTTCCTCAAAAGATTGATTCAAAACAAACAAGTTCAATCTCTGACAAAATGGATGCTACCAACACTAACCAGGTTCCGGCGGTGGCAAGAAGTTTCCCGCCACAAACCACAGCTGCTGCATCAGCTGTAAAGATACCTCCAACTACTGGGAAGTCGGCCAAGGGACCGTCGGCTCCGTTTTCAAGCGGCAAACAACCCTCTAAACCGGCGACACCTCAAACTGTTGTTCCACTCCAGCAGACTGTATCGACTCCTAAAGCACCGTTTGCAAACAGACAAAAGCGTGAAGGAACATCTAATCGATCACCATCAAATGATATGGGAGACAATAATGAGAGATCTATGGTCACAGAGCATATCAAAAGAGAACCACCACTACCTCCGAGTAAAGCGCCTATGCCAATATCTATTACGCTTCATTCTGCGGGTCAACCGTTGATTGTGACAAGTAAAGCGCCTTTCGGACATTCCCGAAAAGCTAGCGGAGCTCCAGAGCCACCACCCGCCCCTCAACCTCCACCACCAGCACCGACGGCTTCCGATTTCCCTCCACCACCGACACCTCGCAACCGTACCGAGCCACCACCGCCTGTGGTACAGCCCCAACCGCAACCCGCGCCTGGCAAATCGTGGGCTAGTCTATTCTCTTCGAAACCTAGTATACCTGCACCGGCGCCCGTTCCAGCAGTTGCAGCTCCTGTCGTTGAAGAGTCAGTCAGCCCGATATCCAGTTCACCTCCTGTCGCTCCCAACTTGCAAAAACCGGTAGCCAAAGTTCCACCGTTTGATGCCTCTCCCTTGCCGGGTGCCGCTCCCGATAAAAATGGTCCGGTTCCAGCCTCGATTCCAGCGGTGTCGTATTCTGAGAAGACGTCGGTAAATTCTGGTAGCACTCAGTCGCCACCAATGATAACTCCAAAACCGACGGCAGGCCAATCCCATGCCGAACAGCGTGAAGTTCCGGTACAACGCGATTCCACCCCTGCCGTGCCACCGCAACCTTCACCTTTCAGCGACGATCCTAATTCTTATCGAATGGGAGAATTTCTGACTAAATATCAGCTAGATCACCGTCCGGTCGCAATCTTGCCTCGCGGTTTGACTAACCGATCGAACTATTGCTATGTAAATGCAATCTTGCAAGCGTTGATCGCGTGCCCTCCCTTCTACAACTTGCTCAAAGCCTTGCCGTATCAAACACGTCGCGGCAAATCCAGCACACCAGTAATTGATTCCATGGTGGAACTATGCTACGAGTTCAGTGCAAACGGCACCACGACGACAACGAACGGGCGCGGTCGTGGAAGCAACGCCAGCGCGGCGAGCACCGGACCGCTAGTGCCCGGCGCGCCGCCGCTCGAGGGTGGCGCAGGGCTGCGTGTACTGCGAGCGCTCCGACCCTTCCCTGGCTCACAGGAAGGTAGACAAGAAGATGCAGAAGAGTTTCTTGGCTGTCTTCTGAACTCTCTCAATGATGAAATGCTTGAGCTGATGAAGTTAGTTGAGCCCGATGAGCCCAAAGAAAACAACAGCCAGCCCAATGGAATTGTCACTTCTGATCAGTCGCCTGAAGAGGAGGATGACGATGATGAATGGAAGGTAATGGGTCCCCGAAACCGTGGGGCTGTGGAACGTCGTTGGGCGGCGCGTCGTACTCCCGTTGCCGATATCTTTCGCGGACGAACCAGGCTGCGGCTGCATCGCGCTCAGCATCATGACGTCACTGATGCTGTGCAACCTTTCTTCACTCTACAACTTGATATTGAGCGTGCAACCAGTGTTAAAGAAGCCCTAGAATTATTGGCAGGAAAAGATACTCTGGAAGGTGTCAGTGATGCATGGCAGCAATTGGCTCTGGAAGAACTCCCAGTAACATTGTTGTTGCATCTTAAGTGTTTCCAATTTGACCAGGATGGACATACTGCTAAGATTGTGAAGAACATTGATTTCCCTGTTGATTTGAAAATTGATCCAAAAATAATGTCATCAAAACCAAAGTACACAACAAAACAGCGATTGTATAAGCTGTTTGCAGTGGTGTACCATGAGGGTGTTGAGGCAGTTAAGGGTCACTATCTCACTGACACTTATCATGGGCAAGCTGGATGGATAAGATATGATGATTCAACTGTCACTCAAGTAACAGATGCCCAAGTATTGAAGCCGAAACCTCCGAGAATGCCGTACCTCCTCATGTATAGACGCCATGACACTCTTCTGCCTCACAGGCCGGTGAAGACTGAATGA

Protein

MVNSNNLKGRNAMDLMKTEYEFLDLSDVKGADLSSLQCALFENKLDSAAAHTVGRTKPAIGGSSGASKVGIPTVSNSVDSLSGGEGEMAPHSPARSGAGPAPHPPPYAQPPPTYPPPHAQWPVAPPNVYVSQVTANVNVHGYMGQYYQPPTPQYVPSTQERAPRTNRRDRRGKRQPSPPSHQPQPYYLQYPQYYPAAQAQGAPLYHLPFYQPLVYGPYTYPPYYPEYPMPVEGDAEKGPEEYPPEVVMEQETVDAYYASAHYAAPPYGPPVEGAVEYVPPLYLPTPHHPPPLQPPPHHHHTPHQFNVHAKNFVQGQGRNYTPVDKTPERRTPPTATASANVDGLPIKDLKIANKGPNSPKQNEKSIEISQVKQVPSMVDKVPQKIDSKQTSSISDKMDATNTNQVPAVARSFPPQTTAAASAVKIPPTTGKSAKGPSAPFSSGKQPSKPATPQTVVPLQQTVSTPKAPFANRQKREGTSNRSPSNDMGDNNERSMVTEHIKREPPLPPSKAPMPISITLHSAGQPLIVTSKAPFGHSRKASGAPEPPPAPQPPPPAPTASDFPPPPTPRNRTEPPPPVVQPQPQPAPGKSWASLFSSKPSIPAPAPVPAVAAPVVEESVSPISSSPPVAPNLQKPVAKVPPFDASPLPGAAPDKNGPVPASIPAVSYSEKTSVNSGSTQSPPMITPKPTAGQSHAEQREVPVQRDSTPAVPPQPSPFSDDPNSYRMGEFLTKYQLDHRPVAILPRGLTNRSNYCYVNAILQALIACPPFYNLLKALPYQTRRGKSSTPVIDSMVELCYEFSANGTTTTTNGRGRGSNASAASTGPLVPGAPPLEGGAGLRVLRALRPFPGSQEGRQEDAEEFLGCLLNSLNDEMLELMKLVEPDEPKENNSQPNGIVTSDQSPEEEDDDDEWKVMGPRNRGAVERRWAARRTPVADIFRGRTRLRLHRAQHHDVTDAVQPFFTLQLDIERATSVKEALELLAGKDTLEGVSDAWQQLALEELPVTLLLHLKCFQFDQDGHTAKIVKNIDFPVDLKIDPKIMSSKPKYTTKQRLYKLFAVVYHEGVEAVKGHYLTDTYHGQAGWIRYDDSTVTQVTDAQVLKPKPPRMPYLLMYRRHDTLLPHRPVKTE

Similarity

Belongs to the peptidase C19 family.

Uniprot

A0A212FIL3 S4NNM8 A0A2H1WZR2 A0A0L7LM33 A0A0N1IBP8

Pubmed

22118469 23622113 26227816 26354079

EMBL

AGBW02008365 OWR53567.1 GAIX01012209 JAA80351.1 ODYU01012302 SOQ58541.1 + More
JTDY01000629 KOB76414.1 KQ461161 KPJ08034.1

Proteomes

UP000007151 UP000037510 UP000053240

Pfam

PF00443 UCH

Interpro

IPR028889   USP_dom        + More
IPR018200   USP_CS
IPR038765   Papain-like_cys_pep_sf
IPR001394   Peptidase_C19_UCH

SUPFAM

SSF54001 SSF54001

ProteinModelPortal

A0A212FIL3 S4NNM8 A0A2H1WZR2 A0A0L7LM33 A0A0N1IBP8

PDB

5K1A E-value=5.74608e-08, Score=141

KEGG

101740338 K11841 ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-termina

GO

GO:0006511 GO:0036459 GO:0016579 GO:0008061 GO:0020037 GO:0006259 GO:0004813 GO:0006419 GO:0015923 GO:0005634 GO:0006260

Length:

1128

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02481

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.00017

outside

1 - 1128

Pi

251.54449

Theta

206.601637

Tajima's D

0.48014

CLR

0.413873

CSRT

0.510024498775061

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics