SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06501  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011630
Annotation
PREDICTED:_supervillin-like_isoform_X2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.319 Mitochondrial   Reliability : 1.258
 

Sequence

CDS
ATGTTTGCCAACAGGGTCGGCGGTGGAGTCCAACGCAGCGCCACACATGCGGACATGCCGAACAGAGGTGTAACGATCGCCGAAAGGCTTGCTGCACTTCAGGCGGCGGGAGCTAATGACTGGCGTGCCAGAGTTTGCCGTCTCAGCCCTGAGAGAGACGAAACCAAGGCCATTGAAAGAGCAAAGAACAGAATAAATGAATCTCTGAACGCTGTTGCAGATGAAAAGAAAAAGGTTCAAGTCGACGAAAACGAATTAGGGCCTAATATTCTTGCTGACAGAAGAAACAAATTGGAGACGGCGTCGCAGGGATGGCGCAAGAGAGTTCCCCAGAACGATGCTACGATGTTCACGGTGGCTGGCCGTCTGGAACGAGACAAGGTCGCTACGACCACACCACCGCTGACTCCTCCGACGATACCATCACCAATGGCAGTCGCATCACCTGGCATACCGCCTCCGAACAAGTTCAGATCTCGCAAACAGCCATCGTCACCAACAAACGGGTTCCCATCTGGCCCGCTCAGGTCGGCCTCGTGCGCTGTAGTCAGTGCTGCAGCCGTTGAACTGAAACCCAAGGAACCGGTGCGAATCGACAGAGAATCCTTCAAGAGGAGTCATTCCGTCAGCGAGAGTATTAGCAGCAGAGCCGAAGAGAAGGATGAATCTCCCGGTGCAGAAAAGTCGGGTTGCCCAGTTAGAGTACCACGGGCAGACGACGAGACCTTCCATGCGTTCTTCGCTCCTCTTCAGCAACAGGAGAAGACCGTTGACGCCGTGGACGTCGATCTAGACGCCATCGATAGCGGCTCAAGGCAATTGTTGGCCAATGAATGGAGTCGTCGTGCCAAACGCGAGCGTCGCCACGCCGCCTCCAGGAACCCGCTGAGGGCGCTCGCCGCGCGCACCGACCTGCGCGACGAGTACGTCCCGCCCCCCTCCACCAATATACGGGAACAGCTTATCAAGGAGAAAGTGACGGCAAACGTGGGCTTAGCAGCTGAAGCTCTGGCGGCCCTCGCCAGCAAGGAAGACTTCGCCAACGTGGCCCTGCGCAGTGCGGCGTCCGGGCCTGCGCCCCCGCACGGCACCCGCGCGCTCATGCTGCTCCACGTCAAGGGCAGGCGACGGGTGCAGACAAGACTCGTGGAGCCTGTTCACACGAACATCAACCGAGGTGATTGCTTCATACTCATCTCGGCGGACCAGCTGTTCCTCTATATTGGACAATACGCTAACGTCATTGAAAGAAATCGTAGCATGGACGTTGCTCAGCACATCCTCAACACAAAAGATCTCGGATGCAAGAACGCCGCGAGCATCACGAAAATCGACGAGCAATCGAAGAACTACAACAACAAACATTGGAACCAATTCTGGACACTGCTGGGCGTCACCGAAGACATCGAAGATTACAAACCGGCCGAAACCGGACACCCCGACGAAGACGAAATATTCGAGTCGTGCATCGTCCAGACCAACATGTGCTACGAGGTGCTGGACGACGAGCTGGTGCCGATCAAGGAGTACTGGGGCCAGATGCCGAGGATCGCGATGCTGAACCAATCGAAGGTCATCGTATTCGATTTCGGTTCCGAAATGTACATATGGTACGGCAAGAACGTGCCCCTCGAGAGCAGACGTCGCGCGGCCCAGCTCGCCCAGGAGCTGTACGACGACGGCTACAACTACGAGGAGTGCCACGTCAACCCTCTGAACGCCGCAATGTATCAGGGCGCACGCGAACAGATTGACGCGACCGCCAAAACGTCCAAGACCCGACCCGAGTGGGCGATACTGTCCAAAGTCACCCAACACATGGAAACGATTCTGTTCAAAGAGAAGTTCCTCGACTGGCCAGACTACACCCGAGTAATTCGGGTCAAGACCCAAGAAAACAAAACGAACACCGCCGAAATAACTCCGTGCGATGCCGAGGAGATGTGGTCGAACGAGTACCAGGACCCGGATCTCGTTCTGGAGGGATCTCACCTGGGCCGCGGGACGCATTACTACGACAAAGACAACATGAGACATTACGACATCAGAACTAAGTCCGTTTGCAAGTGGCTCGTGCGGGAATACGATTATCAGAAGGTCGAAAACGAAGCCGAGATTCCGGAGTTCTTCTCCGGGGACAGCTACATCATTCGTTGGGAATACCAGATCACCGTCACCGGCCGAGAGCTGAACGGGAAGCCGTCGAAACACAACGTGACCGGCCGAGACCGATGCGCCTACTTCTGCTGGCAGGGGAAGGACGCGTCTCCCAACGAGAAAGGCGCGGCGGCTCTGCTCACCGTCGAGCTGGACCGCGAGAAGGGGCCGCAAGTCCGTGTCGCCCAAGGCAACGAACCTCCCGCCTTCCTGAACCTGTTCCAAGGGAACTTGGTCATATACCAGGGAAAGCGCGGAGTCGATAAAAGCCGATACAGACTATTTGTGACTCGGGGTAATCTGTCGAACGAAGCGTACCTCCTTCAAGTGCCCTGCTCCGTGCGGCAACTTCGAAGCCGCGGCTCGCTGATTTTGATCGACACGGAGAAGGGCCGGCTGTACATCTGGCACGGAGCGCGCAGCCTCAAGCACACGAAGAACATCGCTATCGAACTCGCCAACAAGCTGATCGCCAGGAAGTCTGATTACTTGTTCGGCGGCGAGCTGGAGATCAGCGAGGTGAAGGAAGGCGATGAGCCCAAGGAGGTGCTGGAGGGTCTGGGCGTCTCCAACAAGCAGTACTACAACTCGGTGCTGAGCGGCGGGCGGGAGGCGGGCGGTGACGTCACGCCGCGCCTGTTCCACTTCACGGACGCGAGCGGACAGTTCGAGGCTAACGAGGTGTTGTCTCCGCTGCGGCACGAGCAGCTGGTGACACCCTTCCCTTTTGAGCAAAAGGAGTTGTATTCCGCTTCGCAACCTGCTCTGTTCCTGTTGGACGACGGTCTTCACGTGTGGCTGTGGCAGGGATGGTGGCCTCGCGGCGAAGACGGTGAACTTGAACCCGCAGAGATTAACAACGGTGTGGGAGCGTTCGCAGGTCGGTGGCAGGCCGTGCGCGGCGCCGCCCTCCGCACCGCCGCCGCGTACTGCCGCCGCCCCGCGCCCCTCCCCGCGTCTGCCGCCGCATCCCCCGCCGCGCCCCCCACCGCGCCCGCCGCCGAGCTGCGCGTGGTCGCGGCCGGGCTGGAGCCGCAGGCCTTCACCGACCTTTTCGACACCTGGGAGCATCACGACGAGGCCGCCGACGCTAACATTGCTCACGGGTTCAAGGCGGGGGAGGTACTGTGCGGGGTGCGGGAGCTGACGCGCCTGTCGAGCCGCGCCGAGTTGCCGCTGGCCGCGCTGCAGCGCCGCCCGCTGCCCGACCACGTCGACCCGCACCACCTCGAGCGGCACCTCTCGGCGCACGACTTTACGGAGGCCTTTGGTATGACTCAAGAAGAATTCGCGGTTCTGCCGGCCTGGAAACAGACTAACATGAAGAAAGATCTCGGACTGTTTTGA
Protein
MFANRVGGGVQRSATHADMPNRGVTIAERLAALQAAGANDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKKKVQVDENELGPNILADRRNKLETASQGWRKRVPQNDATMFTVAGRLERDKVATTTPPLTPPTIPSPMAVASPGIPPPNKFRSRKQPSSPTNGFPSGPLRSASCAVVSAAAVELKPKEPVRIDRESFKRSHSVSESISSRAEEKDESPGAEKSGCPVRVPRADDETFHAFFAPLQQQEKTVDAVDVDLDAIDSGSRQLLANEWSRRAKRERRHAASRNPLRALAARTDLRDEYVPPPSTNIREQLIKEKVTANVGLAAEALAALASKEDFANVALRSAASGPAPPHGTRALMLLHVKGRRRVQTRLVEPVHTNINRGDCFILISADQLFLYIGQYANVIERNRSMDVAQHILNTKDLGCKNAASITKIDEQSKNYNNKHWNQFWTLLGVTEDIEDYKPAETGHPDEDEIFESCIVQTNMCYEVLDDELVPIKEYWGQMPRIAMLNQSKVIVFDFGSEMYIWYGKNVPLESRRRAAQLAQELYDDGYNYEECHVNPLNAAMYQGAREQIDATAKTSKTRPEWAILSKVTQHMETILFKEKFLDWPDYTRVIRVKTQENKTNTAEITPCDAEEMWSNEYQDPDLVLEGSHLGRGTHYYDKDNMRHYDIRTKSVCKWLVREYDYQKVENEAEIPEFFSGDSYIIRWEYQITVTGRELNGKPSKHNVTGRDRCAYFCWQGKDASPNEKGAAALLTVELDREKGPQVRVAQGNEPPAFLNLFQGNLVIYQGKRGVDKSRYRLFVTRGNLSNEAYLLQVPCSVRQLRSRGSLILIDTEKGRLYIWHGARSLKHTKNIAIELANKLIARKSDYLFGGELEISEVKEGDEPKEVLEGLGVSNKQYYNSVLSGGREAGGDVTPRLFHFTDASGQFEANEVLSPLRHEQLVTPFPFEQKELYSASQPALFLLDDGLHVWLWQGWWPRGEDGELEPAEINNGVGAFAGRWQAVRGAALRTAAAYCRRPAPLPASAAASPAAPPTAPAAELRVVAAGLEPQAFTDLFDTWEHHDEAADANIAHGFKAGEVLCGVRELTRLSSRAELPLAALQRRPLPDHVDPHHLERHLSAHDFTEAFGMTQEEFAVLPAWKQTNMKKDLGLF

Summary

EMBL
BABH01012210    GDQN01003187    JAT87867.1    GDQN01004114    JAT86940.1    ODYU01010382    + More
SOQ55458.1    GDQN01006115    GDQN01001030    JAT84939.1    JAT90024.1    GDQN01007076    JAT83978.1    KZ150151    PZC72835.1    GDQN01007525    JAT83529.1    KQ461161    KPJ08030.1    AGBW02014557    OWR41441.1    KQ459590    KPI97237.1    RSAL01003954    RVE40211.1    JTDY01000485    KOB76963.1    NEVH01013240    PNF29600.1    PNF29602.1    PNF29597.1    GECU01016990    JAS90716.1    GECU01032829    GECU01011130    JAS74877.1    JAS96576.1    PNF29601.1    KK852855    KDR14928.1    KQ414657    KOC65676.1    GL449633    EFN82394.1    GEZM01035133    JAV83387.1    KQ980612    KYN15137.1    GL888565    EGI59485.1    KZ288282    PBC29601.1    KQ976413    KYM90387.1    DS235281    EEB14365.1    GL441651    EFN64465.1    KK107077    EZA60520.1    QOIP01000010    RLU17725.1    PNF29596.1    KQ982519    KYQ55557.1    GALX01004119    JAB64347.1    GEBQ01012855    JAT27122.1    GBYB01009646    GBYB01011430    JAG79413.1    JAG81197.1    GGMR01016429    MBY29048.1    GBYB01009649    JAG79416.1    GAKP01021576    JAC37376.1    GDHF01022937    GDHF01015135    JAI29377.1    JAI37179.1    GFXV01000410    MBW12215.1    GAKP01021578    JAC37374.1    GBYB01009648    JAG79415.1    GBXI01016622    JAC97669.1    GAKP01021580    GAKP01021579    JAC37373.1    ABLF02035267    ABLF02035269    ABLF02047809    CH964062    EDW78819.2    GDIQ01059082    JAN35655.1    GAKP01021577    JAC37375.1    GDIP01177108    JAJ46294.1    GDIQ01148051    JAL03675.1    CH902618    KPU77568.1    LRGB01002011    KZS09668.1    OUUW01000012    SPP87606.1    GDIP01236861    JAI86540.1    GDIQ01222872    JAK28853.1    GDIQ01020714    JAN74023.1    GDIP01131616    JAL72098.1    GDIP01031241    JAM72474.1    GDIQ01198430    JAK53295.1    GEBQ01015519    JAT24458.1    KPU77559.1    KPU77569.1    GDIP01138067    JAL65647.1    GDIQ01205178    JAK46547.1    CM000159    EDW93923.1    KRK01525.1    GDIQ01163647    JAK88078.1    GDIP01197008    JAJ26394.1    GAMC01019715    GAMC01019714    GAMC01019712    JAB86840.1    CCAG010019515    KPU77566.1    KPU77558.1    KPU77565.1    KPU77560.1    CH379069    EDY73854.3    KRK01524.1    GDIQ01218927    JAK32798.1    KPU77561.1    APGK01050876    APGK01050877    KB741178    ENN73166.1    JH431878    KA646073    AFP60702.1    KA646074    AFP60703.1    CH916366    EDV95526.1    CH477262    EAT45647.1   
Pfam
PF02209   VHP        + More
PF00626   Gelsolin
PF01607   CBM_14
Interpro
IPR007122   Villin/Gelsolin        + More
IPR036886   Villin_headpiece_dom_sf       
IPR029006   ADF-H/Gelsolin-like_dom_sf       
IPR003128   Villin_headpiece       
IPR007123   Gelsolin-like_dom       
IPR002557   Chitin-bd_dom       
IPR036508   Chitin-bd_dom_sf       
IPR036180   Gelsolin-like_dom_sf       
SUPFAM
SSF47050   SSF47050        + More
SSF57625   SSF57625       
SSF82754   SSF82754       
Gene 3D
PDB
2FGH     E-value=3.26158e-20,     Score=247

Ontologies

Topology

Length:
1167
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00058
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.00004
outside
1  -  1167
 
 

Population Genetic Test Statistics

Pi
300.314438
Theta
182.927578
Tajima's D
2.059527
CLR
0.246527
CSRT
0.889555522223889
Interpretation
Uncertain
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