SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06493  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011625
Annotation
PREDICTED:_85/88_kDa_calcium-independent_phospholipase_A2_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 1.047
 

Sequence

CDS
ATGTATTTTGGTCCGGCGGCCGGCGGCGGCGACGAGTCGGCGGCCCCCCCGCCCCCGCCCCCCCACCAGCAGCTCGTGTGGCAGGTGGCGCGCGCCACCGGGGCCGCGCCCTCCTACTTCCGAGCTTCGGGCAGGTACCTGGACGGTGGGCTCATGGGCAACAACCCCACCCTGGACGCGCTCACGGAGCTGGCGGAGCTGGGCCTGGCGCTGCGCGGCACCGGCCGGGGCGAGCTCGCCGCCGCCTGCGGCCTCAAGATAGTCGTGTCCTGCGGGACAGGACAAATCCCCGTGACGCTCGTGAAGGACTTCGACGTGTTCAAGCCGGAGAGCCTGTGGGACACGGCGCGGCTGGCCTGGGGACTGTCGGCGCTGGGCAGCCTGCTGGTCGACCAGGCGACGCAGGCGGACGGGCGCGTGGTGGAGCGGGCGCGCGCGTGGTGCGGCGCGGCGGGCGTGCCCTACTACCGGTTCTCGCCGCCGATGTCGCGCGACGTCAGCATGGACGAGCGCTCCGACGAGAGGCTGGTCTGCATGCTGTGGGAGGCGCAGGCCTACATGCGCGACCACCGGGACGAGGTCGCCGAGCTGGCCGCCCTCCTCGCCGACGCCGGTGAAAATGACAAGTAA
Protein
MYFGPAAGGGDESAAPPPPPPHQQLVWQVARATGAAPSYFRASGRYLDGGLMGNNPTLDALTELAELGLALRGTGRGELAAACGLKIVVSCGTGQIPVTLVKDFDVFKPESLWDTARLAWGLSALGSLLVDQATQADGRVVERARAWCGAAGVPYYRFSPPMSRDVSMDERSDERLVCMLWEAQAYMRDHRDEVAELAALLADAGENDK

Summary

EMBL
BABH01012256    BABH01012257    BABH01012258    BABH01012259    BABH01012260    BABH01012261    + More
KQ461161    KPJ08024.1    NWSH01000855    PCG73839.1    KJ995815    AIN39484.1    ODYU01008038    SOQ51307.1    RSAL01000010    RVE53707.1    KZ150225    PZC72063.1    RVE53708.1    JRES01000522    KNC30446.1    AJVK01062013    CH479240    EDW37534.1    CH379069    KRT08174.1    OUUW01000012    SPP87448.1    GEZM01037773    JAV81942.1    EDY73721.1    SPP87449.1    CH902618    KPU77849.1    EDV39073.1    CH933816    KRG07668.1    EDW17197.1    CP012525    ALC44081.1    GBXI01008684    JAD05608.1    CH940647    KRF84011.1    UFQT01000224    SSX22002.1    EDW68769.1    KA645788    AFP60417.1    CH964095    EDW78959.2    AY122192    AAM52704.1    CH954178    KQS43751.1    CM000159    KRK01581.1    EDV51266.1    KQS43752.1    EDW93970.1    AE014296    BT125951    AAF50194.3    ADX35930.1    NEVH01003752    PNF40045.1    BT024215    ABC86277.1    AAN11936.2    AAN11937.2    AAN11938.2    CCAG010013633    CM002912    KMY98784.1    CH480815    EDW40939.1    CM000363    EDX09921.1    KMY98783.1    JXJN01010264    GAKP01016555    JAC42397.1    CH916366    EDV95951.1    JXUM01124117    JXUM01124118    JXUM01124119    JXUM01124120    KQ566793    KXJ69824.1    SSX22001.1    GDUN01000021    JAN95898.1    GGFJ01001714    MBW50855.1    GGFM01002973    MBW23724.1    APGK01041340    KB740993    ENN76020.1    GAPW01002299    JAC11299.1    KB632256    ERL90755.1    GAMC01008984    GAMC01008981    JAB97574.1    AXCM01005571    KK852649    KDR19488.1    GAMD01001151    JAB00440.1    GFDL01009920    JAV25125.1    GFDL01009862    JAV25183.1    GGFK01002153    MBW35474.1    GGFK01002173    MBW35494.1    GFDF01007700    JAV06384.1    GGFK01003413    MBW36734.1    AXCN02001910    AJWK01034104    AJWK01034105    AJWK01034106    ENN76021.1    KQ435714    KOX79194.1    ADMH02001698    ETN61384.1    GL762073    EFZ22306.1    KQ434796    KZC05683.1    AAAB01008968    EAA13225.3    APCN01005322    GANO01000453    JAB59418.1    KQ981805    KYN35539.1    KQ978801    KYN28285.1    ADTU01002051    KQ976403    KYM92145.1    KQ982757    KYQ51121.1    CVRI01000064    CRL05329.1    GL888531    EGI59661.1    LBMM01001525    KMQ96141.1   
Pfam
PF06456   Arfaptin        + More
PF01734   Patatin
PF04629   ICA69
PF12796   Ank_2
PF00023   Ank
Interpro
IPR006723   Islet_autoAg_Ica1_C        + More
IPR002110   Ankyrin_rpt       
IPR010504   AH_dom       
IPR002641   PNPLA_dom       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR036770   Ankyrin_rpt-contain_sf       
IPR027267   AH/BAR_dom_sf       
IPR020683   Ankyrin_rpt-contain_dom       
SUPFAM
SSF48403   SSF48403        + More
SSF103657   SSF103657       
SSF52151   SSF52151       
Gene 3D
PDB
6AUN     E-value=7.55396e-34,     Score=356

Ontologies

Topology

Length:
209
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02651
Exp number, first 60 AAs:
0.00122
Total prob of N-in:
0.01257
outside
1  -  209
 
 

Population Genetic Test Statistics

Pi
47.262801
Theta
144.329991
Tajima's D
-1.152366
CLR
1197.184609
CSRT
0.110644467776611
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 DEKPKNVNLDK 100.00 1e-04
26822097 HGGTPIHWAVSR 100.00 0.012
26280517 AVSGAAGGYTTGPK 100.00 0.012
25044914 AWAAETNYEPEK 100.00 0.012
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