SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06492  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011625
Annotation
PLA2-C_[Spodoptera_exigua]
Location in the cell
Cytoplasmic   Reliability : 1.499 Mitochondrial   Reliability : 1.682
 

Sequence

CDS
ATGCTGAATTCATTTTTTCGTGGTCTTCTTCGTACCGAAGAGCTGCCGACCAAAGTCCTCGACGTGCGATCAGACAACTACATCTCACGACCAGTTCACTACAGGGAAGATAGTATGTTATTGTATGGTCCGAAAATACCGAATGACGGTAAAAATCCTAAAGATAAATATTACGAAATCGTTCTATACAAACCGTTTACAGAGAATTTACATCAAATGTACAGTTTACTTCGGTCAGAAACTCTTGAGAGTGCAGAAGAAAAGTTCATAGTGTTCAAAGAAAGAATACCCATTTTTATACAAATTACCAAAGATTGTACCGTTTCAACCCTACAAAAATTATGCGATATTTTGTCGGAGCATCAGTCGTGGACAATAGCGCATTTGATAGCGCACTTTGGCCTGTATGAACACTTGACTCATGCGGCGGTAAAGAAACACATCAATGAAATCGATCCAATCACGGGAGCCACGCCTTTGATGGTGGCCCTGAAGACATCGTGCTTGCGAGTCGTACAATGTTTGGTGTCGCATAATTGCTCTCTGGACACGATTGATGTTGATGGGAACACAGTCTTTCACTACGCGGCAGCTAGCAACAAGGAGATAATTAATATCCTGGCCAGTAAAACGTCTGCGCCTCTGAACGTGTACAACCACCAAGGCTACACGCCGCTGCACATGGCTTGCCTCGCGGACGCGCCTGACTGCGTGCGCGCCCTCATGCTGGCTGGCGCCGATGTTAACCTCTCCGCCGCCAAACGTTCCACAAGCACCTTACCGGGTATCGTGGGCGACCTGCTGCAAGACAATCAGCCCAAGCTGTACCAGCAGGACATGAAGCACGGCGGCACCCCGCTGCACTGGGCCGTCTCCAGGGAGGTCATCGACGCGTTGGTCGACAAGAACTGCGACATCAACGCTTTGAACTTCGACGGCCGCACCGCCCTGCACGTGATGGTGCTGCGCGGCCGGCTCGAGTGTGCGATCGCGCTGCTGTCCAGGGGCGCGGAGATATCTGTGGCCGACAACGAGGGAAACACGCCGCTTCATTCGGCGGTCAAACAATCGTACGTGATCACTCAAGCGCTGGTGGTCTTCGGTGCTGACCTGAACGCGAGGAACAACGCCGGCCACACGCCCAGGCACGCCGTGCTCGCAGACACCTCCAATAACTCTGACAAGATTCTCTATGTTCTGCATTCCGTCGGAGCTAAAAGGTGTCCCCCCGAGCAGGTGGGCTGCGGGCCGGGCTGCGCGGCGCGCGGGGACTACAACGGGGTGCCGCCCTCCACGCTCAGCCCCCCGCCCGCCCGGACGCTCATTAACCACATGCTGTCCGTGGCCGCCATGGAGAAGGCGTCCTGCTTTGATCCCAGCGAAAAACAGGGCCGTTTGCTGTGCCTGGACGGCGGCGGCATCAGGGGCCTGGTGCTCGTCCAACTGCTCCTGAGCCTGGAGGAGGCGGTCGGGAAGCCCATCATACACTGCTTCGACTGGGTGGCCGGGACCAGCACCGGGGGCATCCTGGCGTTGGCGTTGGCCAGCGGGAAAACGTTAAGGGAATGCCAGCAGCTGTACTTCAGACTGAAGGAGCTCGCGTTCGTTGGCATGAGACCGTACCCTTCGGAGGCGCTCGAGAACATCTTGAAGGAGTGCTTAGGTACAGAAACAGTAATGTCGGATATAAAGCATCCGAAGCTGATGATCCTGGCCGTGCTCGCCGACCGGAAGCCGGTGGACCTGCACATCTTCAGGAACTACAAGTCCGCTCATGAAATACTCAGCGAACACAACGGCACGACCGGTTAG
Protein
MLNSFFRGLLRTEELPTKVLDVRSDNYISRPVHYREDSMLLYGPKIPNDGKNPKDKYYEIVLYKPFTENLHQMYSLLRSETLESAEEKFIVFKERIPIFIQITKDCTVSTLQKLCDILSEHQSWTIAHLIAHFGLYEHLTHAAVKKHINEIDPITGATPLMVALKTSCLRVVQCLVSHNCSLDTIDVDGNTVFHYAAASNKEIINILASKTSAPLNVYNHQGYTPLHMACLADAPDCVRALMLAGADVNLSAAKRSTSTLPGIVGDLLQDNQPKLYQQDMKHGGTPLHWAVSREVIDALVDKNCDINALNFDGRTALHVMVLRGRLECAIALLSRGAEISVADNEGNTPLHSAVKQSYVITQALVVFGADLNARNNAGHTPRHAVLADTSNNSDKILYVLHSVGAKRCPPEQVGCGPGCAARGDYNGVPPSTLSPPPARTLINHMLSVAAMEKASCFDPSEKQGRLLCLDGGGIRGLVLVQLLLSLEEAVGKPIIHCFDWVAGTSTGGILALALASGKTLRECQQLYFRLKELAFVGMRPYPSEALENILKECLGTETVMSDIKHPKLMILAVLADRKPVDLHIFRNYKSAHEILSEHNGTTG

Summary

EMBL
BABH01012256    BABH01012257    BABH01012258    BABH01012259    BABH01012260    BABH01012261    + More
NWSH01000855    PCG73839.1    KJ995815    AIN39484.1    KZ150225    PZC72063.1    KQ461161    KPJ08024.1    KQ459590    KPI97229.1    AGBW02012761    OWR44499.1    RSAL01000010    RVE53708.1    MF443094    ATU31391.1    JTDY01001516    KOB73677.1    LJIG01022694    KRT79208.1    RVE53707.1    GEZM01037773    JAV81942.1    GL762073    EFZ22306.1    NEVH01003752    PNF40045.1    PNF40046.1    PNF40047.1    KQ971319    EFA00525.2    GL444953    EFN60400.1    GL888531    EGI59661.1    KQ981805    KYN35539.1    ADTU01002051    KQ978801    KYN28285.1    KQ976403    KYM92145.1    GL450107    EFN81540.1    NNAY01000598    OXU27475.1    KK852649    KDR19488.1    KQ978331    KYM95078.1    KQ982757    KYQ51121.1    KQ434796    KZC05683.1    KZ288204    PBC33184.1    KK107570    QOIP01000005    EZA48831.1    RLU23023.1    KQ435714    KOX79194.1    APGK01041340    KB740993    ENN76020.1    GBYB01007059    JAG76826.1    KB632256    ERL90755.1    GBYB01007060    JAG76827.1    KQ760382    OAD60715.1    KQ414615    KOC68741.1    GBBI01003329    JAC15383.1    UFQT01000224    SSX22003.1    GECU01011551    JAS96155.1    GEDC01014317    GEDC01008401    JAS22981.1    JAS28897.1    ABLF02027959    GBHO01006047    GBRD01007217    GDHC01004653    JAG37557.1    JAG58604.1    JAQ13976.1    GECZ01009734    JAS60035.1    SSX22001.1    DS235863    EEB19293.1    GBHO01006045    GBRD01007216    GDHC01019538    JAG37559.1    JAG58605.1    JAP99090.1    GFTR01008594    JAW07832.1    LBMM01001525    KMQ96141.1    ENN76021.1    GGMR01012864    MBY25483.1    GFDF01007700    JAV06384.1    GDRN01088379    GDRN01088378    GDRN01088377    JAI60864.1    GALX01003651    JAB64815.1    ACPB03014090    ACPB03014091    GFWV01007266    MAA31996.1    GEFM01005879    JAP69917.1    GEDV01005757    JAP82800.1    SSX22002.1    GACK01007351    JAA57683.1    GEGO01002069    JAR93335.1    GGLE01002336    MBY06462.1    GEDV01005758    JAP82799.1    GDIP01114792    JAL88922.1    GDIP01123074    JAL80640.1    GDIQ01070692    JAN24045.1    GDIP01233024    JAI90377.1    GDIP01193624    JAJ29778.1    GDIP01223068    JAJ00334.1    GDIP01065095    JAM38620.1    GDIQ01159959    JAK91766.1    GDIQ01158162    JAK93563.1    GDIP01104040    LRGB01002101    JAL99674.1    KZS09174.1    GDIP01106637    JAL97077.1    GDIP01104041    JAL99673.1    GDIP01082081    JAM21634.1    GDIP01059095    JAM44620.1    GDIP01091580    JAM12135.1    GDIQ01165752    JAK85973.1    GDIQ01011114    JAN83623.1    AJWK01034104    AJWK01034105    AJWK01034106    GDIP01101087    JAM02628.1    GDIP01059096    JAM44619.1    GDIP01179972    JAJ43430.1    GDIQ01102575    JAL49151.1    CH477932    EAT34967.1    GDUN01000021    JAN95898.1    GDIP01012229    JAM91486.1   
Pfam
PF06456   Arfaptin        + More
PF01734   Patatin
PF04629   ICA69
PF12796   Ank_2
PF00023   Ank
PF13606   Ank_3
Interpro
IPR006723   Islet_autoAg_Ica1_C        + More
IPR002110   Ankyrin_rpt       
IPR010504   AH_dom       
IPR002641   PNPLA_dom       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR036770   Ankyrin_rpt-contain_sf       
IPR027267   AH/BAR_dom_sf       
IPR020683   Ankyrin_rpt-contain_dom       
SUPFAM
SSF48403   SSF48403        + More
SSF103657   SSF103657       
SSF52151   SSF52151       
Gene 3D
PDB
6AUN     E-value=1.91276e-79,     Score=755

Ontologies

Topology

Length:
603
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.29164
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00007
outside
1  -  603
 
 

Population Genetic Test Statistics

Pi
245.479482
Theta
193.653509
Tajima's D
1.116024
CLR
0.026393
CSRT
0.690965451727414
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 TLINHMLSVAAMEK 100.00 1e-06
25044914 CPNIQYIAITGNTIGVTAAHAISK 100.00 5e-06
31250652 AGYAGKIDIGMDVAASEFFK 100.00 0.013
28556443 KLETEK 100.00 0.021
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