Gene

KWMTBOMO06484

Pre Gene Modal

BGIBMGA011621

Annotation

PREDICTED:_protein_JTB-like_[Plutella_xylostella]

Location

Bomo_Chr11(+):8673211-8674900      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.381

CDS

ATGCTTCTAGGAACGTTGTGCCTAGGCATGTTAACTGTAATAGTTCTCATTGTCGAATCACGGCTAGCTGAGAGATTATCAAGCAGTCATAGAATGAAAAACAAAACATTCCCAACAGAGAACAACTCAACCTGTTGGGTTTATCAACCATACAAAGTTATTAGTGAATGTCATCCTTGCTCAGATTTTGAGATTCGAAGTAAGAGTATAGGAGTATGTATACATACAAGTTTTAAAGAAATTTTGAAGTGTGAAAATGGAGAAACTGTGACAAGAAGCTGCGACCGAGTGGCCTATTTAGAGAAGTGGGCCTACTGGAAGTTCACAATTTGGTCATTTGTCATTGGTGCAGCATCCTCTATTGCTGTGATGCTCAGAATGAGAGTTCTCAATTATCGAGCTAAGCGAAGAGCACGACAAATCCTGAGTAATGGAGCGATTTAA

Protein

MLLGTLCLGMLTVIVLIVESRLAERLSSSHRMKNKTFPTENNSTCWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKCENGETVTRSCDRVAYLEKWAYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKRRARQILSNGAI

Similarity

Belongs to the tumor necrosis factor family.

Uniprot

H9JQ15   A0A2A4JMR3   A0A0N0PB28   A0A0L7L524   A0A212FP95   A0A2H1VD02   + More
S4PG96   A0A1A9X3U2   D6WPX6   A0A1A9VPZ8   A0A1A9ZNF4   A0A1B0G0P9   A0A1A9XN69   A0A1B0BE53   B3M799   A0A0L0CMV4   A0A0M5J5K4   Q2M068   B4GS19   A0A034V9T1   A0A3B0JV18   B4LDF7   A0A1Y1K934   A0A0K8W206   B3NEV9   B4KXZ4   A0A1W4W778   B4HW09   B4QML3   O96067   A0A2M4CPE1   A0A2M4AVX5   W5JS83   A0A2M4CP92   A0A1Y9G862   A0A2M4C2I8   T1E2K0   A0A2M3ZD46   B4N5F7   A0A1I8P2E2   B4PDU6   Q8SXQ3   B0W2X5   A0A1I8JW32   A0A1I8JVF1   A0A1S4GYW8   A0A1C7CZC6   A0A1I8JU30   A0A1Y9H9I2   A0A1I8JUS1   A0A182UE08   A0A182NGS6   B4IZX1   Q7Q8E4   A0A240PMZ7   A0A240PL17   A0A240PNY7   A0A1Y9IWC2   A0A1W4W3I3   A0A182T0Z0   A0A3F2YVD6   A0A088AV34   A0A2A3ERB0   A0A182YM86   Q1HQE7   A0A1L8DUY5   A0A1B0CLB3   A0A0M8ZTH6   A0A1B0D8B4   E1ZY45   A0A158NBZ6   K7J9B4   U4UIP9   A0A195FDH9   A0A0K8TKE4   A0A0L7R7L8   A0A151J1A1   A0A1Q3FDK4   N6T349   A0A232F1V8   A0A1I8MNM1   A0A026W6W0   A0A2J7R1C6   T1HFL2   T1GP52   A0A1J1IUJ1   E0VAH2   A0A0P6AJ23   E9G8Y3   A0A2P8Y9D6   A0A0P4WDS8   T1JET1   A0A131XCN7   A0A023FNC8   A0A1E1WXE8   L7MFM6  

Pubmed

19121390    26354079    26227816    22118469    23622113    18362917    + More
19820115    17994087    26108605    15632085    25348373    28004739    22936249    10321732    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20920257    23761445    24330624    17550304    12364791    20966253    25244985    17204158    17510324    20798317    21347285    20075255    23537049    26369729    28648823    25315136    24508170    30249741    20566863    21292972    29403074    28049606    28503490    25576852   

EMBL

BABH01012280    NWSH01000980    PCG73271.1    KQ461161    KPJ08017.1    JTDY01002901    + More
KOB70515.1    AGBW02003646    OWR55520.1    ODYU01001870    SOQ38671.1    GAIX01006260    JAA86300.1    KQ971354    EFA06890.1    CCAG010023106    JXJN01012795    CH902618    EDV38760.1    JRES01000182    KNC33547.1    CP012525    ALC43194.1    CH379069    EAL31068.1    CH699456    CH479188    EDW25724.1    EDW40554.1    GAKP01020649    GAKP01020646    JAC38303.1    OUUW01000009    SPP84903.1    CH940647    EDW68895.1    GEZM01091269    JAV56971.1    GDHF01032302    GDHF01007121    JAI20012.1    JAI45193.1    CH954178    EDV50232.1    CH933809    EDW17666.1    CH480817    EDW50124.1    CM000363    CM002912    EDX08870.1    KMY96954.1    AE014296    BT032659    AB016494    AAF47574.1    ACD81673.1    AGB93984.1    AGB93985.1    BAA34304.1    GGFL01003028    MBW67206.1    GGFK01011613    MBW44934.1    ADMH02000616    ETN65614.1    GGFL01002978    MBW67156.1    GGFJ01010363    MBW59504.1    GALA01000644    JAA94208.1    GGFM01005674    MBW26425.1    CH964101    EDW79596.1    CM000159    EDW92911.1    KRK00800.1    AY084195    AAL89933.1    DS231829    EDS30334.1    AAAB01008944    APCN01000689    AXCN02002201    CH916366    EDV96743.1    EAA10126.4    AXCM01008035    KZ288192    PBC34247.1    DQ440497    CH477416    ABF18530.1    EAT41320.1    GFDF01003837    JAV10247.1    AJWK01017069    KQ435883    KOX69656.1    AJVK01004030    GL435171    EFN73894.1    ADTU01011504    KB632188    ERL89795.1    KQ981636    KYN38715.1    GDAI01003017    JAI14586.1    KQ414638    KOC66860.1    KQ980553    KYN15569.1    GFDL01009446    JAV25599.1    APGK01045834    KB741039    ENN74544.1    NNAY01001279    OXU24513.1    KK107372    QOIP01000004    EZA51795.1    RLU23656.1    NEVH01008208    PNF34632.1    ACPB03010171    CAQQ02026870    CVRI01000059    CRL03370.1    DS235006    EEB10378.1    GDIP01028547    JAM75168.1    GL732535    EFX84058.1    PYGN01000781    PSN40879.1    GDRN01046405    JAI66781.1    JH432130    GEFH01004439    JAP64142.1    GBBK01001221    JAC23261.1    GFAC01007540    JAT91648.1    GACK01002986    JAA62048.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000007151    UP000091820    + More
UP000007266    UP000078200    UP000092445    UP000092444    UP000092443    UP000092460    UP000007801    UP000037069    UP000092553    UP000001819    UP000008744    UP000268350    UP000008792    UP000008711    UP000009192    UP000192221    UP000001292    UP000000304    UP000000803    UP000000673    UP000069272    UP000007798    UP000095300    UP000002282    UP000002320    UP000076407    UP000075903    UP000075882    UP000075840    UP000075886    UP000075900    UP000075902    UP000075884    UP000001070    UP000007062    UP000075881    UP000075885    UP000075880    UP000075920    UP000192223    UP000075901    UP000075883    UP000005203    UP000242457    UP000076408    UP000008820    UP000092461    UP000053105    UP000092462    UP000000311    UP000005205    UP000002358    UP000030742    UP000078541    UP000053825    UP000078492    UP000019118    UP000215335    UP000095301    UP000053097    UP000279307    UP000235965    UP000015103    UP000015102    UP000183832    UP000009046    UP000000305    UP000245037   

PRIDE

H9JQ15    O96067    Q8SXQ3   

Pfam

PF05439   JTB        + More
PF13679   Methyltransf_32
PF13847   Methyltransf_31
PF00229   TNF

Interpro

IPR008657   JTB        + More
IPR025714   Methyltranfer_dom       
IPR029063   SAM-dependent_MTases       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR006052   TNF_dom       
IPR008983   Tumour_necrosis_fac-like_dom       

SUPFAM

SSF47616   SSF47616        + More
SSF53335   SSF53335       
SSF49842   SSF49842       

Gene 3D

2.60.120.40    

ProteinModelPortal

H9JQ15   A0A2A4JMR3   A0A0N0PB28   A0A0L7L524   A0A212FP95   A0A2H1VD02   + More
S4PG96   A0A1A9X3U2   D6WPX6   A0A1A9VPZ8   A0A1A9ZNF4   A0A1B0G0P9   A0A1A9XN69   A0A1B0BE53   B3M799   A0A0L0CMV4   A0A0M5J5K4   Q2M068   B4GS19   A0A034V9T1   A0A3B0JV18   B4LDF7   A0A1Y1K934   A0A0K8W206   B3NEV9   B4KXZ4   A0A1W4W778   B4HW09   B4QML3   O96067   A0A2M4CPE1   A0A2M4AVX5   W5JS83   A0A2M4CP92   A0A1Y9G862   A0A2M4C2I8   T1E2K0   A0A2M3ZD46   B4N5F7   A0A1I8P2E2   B4PDU6   Q8SXQ3   B0W2X5   A0A1I8JW32   A0A1I8JVF1   A0A1S4GYW8   A0A1C7CZC6   A0A1I8JU30   A0A1Y9H9I2   A0A1I8JUS1   A0A182UE08   A0A182NGS6   B4IZX1   Q7Q8E4   A0A240PMZ7   A0A240PL17   A0A240PNY7   A0A1Y9IWC2   A0A1W4W3I3   A0A182T0Z0   A0A3F2YVD6   A0A088AV34   A0A2A3ERB0   A0A182YM86   Q1HQE7   A0A1L8DUY5   A0A1B0CLB3   A0A0M8ZTH6   A0A1B0D8B4   E1ZY45   A0A158NBZ6   K7J9B4   U4UIP9   A0A195FDH9   A0A0K8TKE4   A0A0L7R7L8   A0A151J1A1   A0A1Q3FDK4   N6T349   A0A232F1V8   A0A1I8MNM1   A0A026W6W0   A0A2J7R1C6   T1HFL2   T1GP52   A0A1J1IUJ1   E0VAH2   A0A0P6AJ23   E9G8Y3   A0A2P8Y9D6   A0A0P4WDS8   T1JET1   A0A131XCN7   A0A023FNC8   A0A1E1WXE8   L7MFM6  

PDB

2KJX     E-value=0.08601,     Score=77

KEGG

101741783    no KO assigned | (RefSeq) protein JTB

GO

GO:0016021   GO:0000281   GO:0030496   GO:0005737   GO:0006955   GO:0005164   GO:0016740   GO:0005622   GO:0005840   GO:0006412   GO:0006259   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR13041  

SignalP

Position:   1 - 20,         Likelihood:  0.966122

 

 

Length:

147

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

33.59711

Exp number, first 60 AAs:

11.06204

Total prob of N-in:

0.52621

POSSIBLE N-term signal

sequence

outside

1  -  107

TMhelix

108  -  130

inside

131  -  147

 

 

Pi

224.95643

Theta

199.03713

Tajima's D

0.303905

CLR

0.354349

CSRT

0.451077446127694

Interpretation

Uncertain