SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06479
Pre Gene Modal
BGIBMGA011859
Annotation
PREDICTED:_kelch-like_protein_10_[Amyelois_transitella]
Full name
Kelch-like protein 10      
Location in the cell
PlasmaMembrane   Reliability : 2.815
 

Sequence

CDS
ATGGAATTTAATACGAAACATAAAAAATTAACAAAAGCCAAAAATTCTGTACGTACGCCTTCAATTGCGAGATCACGTTTAAACAAAAAGAAAATTATCACGAGACAAAGAAAATGTGCGTGTCTTCCTGAAAATTATTCTGTGGTAGAATTCCCAGCAATTTGGAATGAACTACGACAAAACGGTCAGCTCTGTGATGGAACGATAATGTGTAGGGATTTGAAAGCAATAGGTGTTCATCGCGCCATACTATCAGCAGTTAGCCCATATTTTAAAGCTATATTTATAAACTCTTTAAACAAAGGTGAACCTGAGGAAACTAAAATATTTGTAGATGTTCCTAGTTTCTATATGAATCTAATACTGGATTACGCTTATACTGGAACTTGTAAGGTTACAGCAGAGAATGTTGAGTATCTTCTGCCATACGCAGACAAATTCGATGTTGTGGGAGTTATCCAACTTTGTTGCCAGTACTTACTGCAAGAATTAAAACCTCATAATTGCCTAGGAATATTTAAATTTGCTCGATATTATTTTTGCGGTGAATTAGAAAAGAAGGGGAAAATGTTTATAAGACAGCACTTTAATAAGATACTAAAGGAATGTAATGAATTTAAATCGCTTACTTTCGAAGAATTGGAAGACATTTTACGAGATGACGAACTGAACGTTAAAAATGAAGAAATTGTTTTTCAAGCTTTAAAGACTTGGGTCGAACATGACTTAGAAAACAGGAGAAAGTACATTCCGTCATTGCTTTCATGCGTTAGATTTGGTCACATAAGTTTTAAATATTTCAAATCAAAAATATTACAATGGCAGCCAGTGGTTGATGATGTGAAATGCCAAGAAGCGTTATACCCAGCAGTGGTGTTTTTAACATTACTAGATTCAAGACCTGGTATGGAAGCAGATTTAAACGATCCACTGGCGCGACCTAGAATTCCTTTTGAAATACTTTTTGCTGTTGGAGGATGGAGTGCTGGTAGTCCTACGAGCTTTGTTGAAACATACGATACAAGAGCTGACCGCTGGTTTCTTTCAATTCACATGGACCTTACTCCACGTGCTTATCACGGCCTCTGCACACTGAACAATCTGATTTATATGATCGGAGGTTTTGATGGTAGTGACCATTTTAATACGGTACGTTGTTACGACCCTGTCACTAATACGTGGCACGAACGCGCCTGTATGTATCAAGCCAGATGCTACGTCAGCGTTGTCGTGCACGACGGTATGATATACGCACTTGGAGGATATAATGGACGTACTCGTATGGCTTCAGTAGAACGGTACTATCCTGACAGAAATCAATGGGAGATGACCACTCCAATGAATAAACAGCGCTCAGACGCTAGCGCGGCATCACTAGGTGGCAAGATTTATATAGTGGGCGGTTTTAATGGACAAGAAGTATTGAGTTCTGCAGAAGTCTTTGACCCAGAGACGCGTCAATGGAGTTTCATCAGGTCGATGCTCAGTCCTCGCTCGGGAGTTAGTCTCATCGCCTACAGGGAATGCTTATTCGCGCTAGGTGGCTTCAATGGATACAGTCGTCTTAATACTGGTGAGAAATTTAATCCACAACGCGGCGGCGAATGGCAGGAAGTAACGGAAATGTTTAGTGCAAGAAGTAATTTCGCCACGGTTCTGTTGGACGATATGATTTTTGTCATCGGAGGATTTAATGGGTCCACAACAATTCCTCTCGTGGAATGCTACGATGGAGATACTCTAGAGTGGTACGACGCCGCTCCAATGAACTTGAATCGTTCAGCGCTCAGTGCTTGTGTTCTTGCCGGTTTACCGAACGCGCGTTCCTTCTCTTATTTGGCGAAAGCTGTGCCTGCCGCTGGTGCTGATCAAGCTCCTCAATCCTAA
Protein
MEFNTKHKKLTKAKNSVRTPSIARSRLNKKKIITRQRKCACLPENYSVVEFPAIWNELRQNGQLCDGTIMCRDLKAIGVHRAILSAVSPYFKAIFINSLNKGEPEETKIFVDVPSFYMNLILDYAYTGTCKVTAENVEYLLPYADKFDVVGVIQLCCQYLLQELKPHNCLGIFKFARYYFCGELEKKGKMFIRQHFNKILKECNEFKSLTFEELEDILRDDELNVKNEEIVFQALKTWVEHDLENRRKYIPSLLSCVRFGHISFKYFKSKILQWQPVVDDVKCQEALYPAVVFLTLLDSRPGMEADLNDPLARPRIPFEILFAVGGWSAGSPTSFVETYDTRADRWFLSIHMDLTPRAYHGLCTLNNLIYMIGGFDGSDHFNTVRCYDPVTNTWHERACMYQARCYVSVVVHDGMIYALGGYNGRTRMASVERYYPDRNQWEMTTPMNKQRSDASAASLGGKIYIVGGFNGQEVLSSAEVFDPETRQWSFIRSMLSPRSGVSLIAYRECLFALGGFNGYSRLNTGEKFNPQRGGEWQEVTEMFSARSNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVLAGLPNARSFSYLAKAVPAAGADQAPQS

Summary

Description
May be a substrate-specific adapter of a CUL3-based E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins during spermatogenesis. Required for male fertility.
Subunit
Self-associates. Interacts with CUL3; indicative for the participation in an E3 ubiquitin ligase complex (By similarity).
Self-associates (By similarity). Interacts with CUL3; indicative for the participation in an E3 ubiquitin ligase complex.
Self-associates (Probable). Interacts with CUL3; indicative for the participation in an E3 ubiquitin ligase complex (By similarity).
Miscellaneous
Does not seem to associate with actin.
Keywords
Complete proteome   Cytoplasm   Differentiation   Kelch repeat   Phosphoprotein   Reference proteome   Repeat   Spermatogenesis   Ubl conjugation pathway   Disease mutation  
Feature
chain  Kelch-like protein 10
sequence variant  In SPGF11; results in impaired self-association; dbSNP:rs116420871.
EMBL
BABH01012284    KZ149967    PZC76156.1    ODYU01009339    SOQ53697.1    NWSH01000980    + More
PCG73282.1    RSAL01000010    RVE53719.1    KQ459590    KPI97219.1    AGBW02003646    OWR55515.1    JTDY01008346    KOB64611.1    KQ977276    KYN04498.1    KQ982446    KYQ56314.1    KQ980734    KYN13828.1    KQ976455    KYM85143.1    ADTU01010045    KQ981305    KYN42968.1    KQ434870    KZC09505.1    KQ414755    KOC61721.1    KK107153    EZA56991.1    PYGN01000029    PSN56988.1    QOIP01000012    RLU16269.1    DS234992    EEB10016.1    GBYB01014169    JAG83936.1    GL766762    EFZ14665.1    KQ971329    KYB28355.1    KYB28354.1    GEZM01080967    JAV61963.1    JH431067    APGK01045172    APGK01045173    KB741031    KI208367    KI208683    ENN74765.1    ERL95846.1    ERL95906.1    KQ435727    KOX78097.1    LNIX01000004    OXA55334.1    NEVH01006981    PNF36303.1    RQTK01000005    RUS91794.1    NEDP02004067    OWF46852.1    KB200701    ESP00682.1    NEDP02003184    OWF49315.1    KB201813    ESO94394.1    JH818378    EKC42522.1    NEDP02002269    OWF51388.1    DS235354    EEB15077.1    KQ461161    KPJ08012.1    EKC42523.1    ACPB03004813    AKHW03000499    KYO46686.1    KZ288254    PBC30839.1    AFYH01149238    AFYH01149239    GFTR01007560    JAW08866.1    KQ976885    KYN07355.1    AGCU01138943    GL443762    EFN61627.1    GECU01020049    JAS87657.1    KQ418269    KOF88050.1    KQ982753    KYQ51196.1    KYN13946.1    KQ414594    KOC70140.1    KQ981523    KYN40249.1    KQ976408    KYM91196.1    ADTU01007164    ADTU01007165    ACTA01012009    GL192892    EFB20106.1    ABGA01331353    ABGA01331354    ABGA01331355    NDHI03003706    PNJ07227.1    AAEX03006455    GBHO01010073    GBRD01001242    JAG33531.1    JAG64579.1    AJFE02044423    AJFE02044424    AJFE02044425    AJFE02044426    AJFE02044427    AJFE02044428    AACZ04038960    NBAG03000371    PNI33986.1    GEZM01002346    JAV97312.1    JH881506    ELR53939.1    AAPE02024581    AGTP01023477    BC139267    BC139268    CH466662    AAI39268.1    EDL02558.1    AY495338    BC085842    AY495337    AK006288    AK014906    AK077202    AAQR03042772    AAQR03042773    CABD030037877    HM005417    CH471152    AEE61015.1    EAW60774.1    AY495339    AK057224    AEMK02000080    CYRY02015514    VCW85495.1   
Pfam
PF07707   BACK        + More
PF01344   Kelch_1
PF00651   BTB
PF00106   adh_short
Interpro
IPR011705   BACK        + More
IPR017096   BTB-kelch_protein       
IPR011333   SKP1/BTB/POZ_sf       
IPR006652   Kelch_1       
IPR000210   BTB/POZ_dom       
IPR015915   Kelch-typ_b-propeller       
IPR036291   NAD(P)-bd_dom_sf       
IPR002347   SDR_fam       
SUPFAM
SSF54695   SSF54695        + More
SSF117281   SSF117281       
SSF51735   SSF51735       
Gene 3D
PDB
6GY5     E-value=1.80452e-49,     Score=497

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
628
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.41963
Exp number, first 60 AAs:
0.00074
Total prob of N-in:
0.01492
outside
1  -  628
 
 

Population Genetic Test Statistics

Pi
233.443947
Theta
186.532085
Tajima's D
0.534471
CLR
0.531301
CSRT
0.528223588820559
Interpretation
Uncertain
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