Gene

KWMTBOMO06477  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011860

Annotation

PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Amyelois_transitella]

Location

Bomo_Chr11(-):8627721-8635770      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.84

CDS

ATGGACTTAAAAGGAAAGGTTGCATTGATAACGGGCGCGGCTTCCGGCATCGGCTTAGCCTATAGCGAAGAATTATTAAAACAAGGTGCTAAGGTTTCCCTATGCGACATCGATTCGGAGCGCGGGGAACAAGTAACAGAAAAGCTCGCTTCAAAATATGGCCGAAAAAACGTTTTGTTTTGTCGATTAGATGTTACTGACTATCCACAATTTGAAGAGGCATTTGTGATGACAGTAGAGGAGTTCAACCGGATTGACATTGTCATTAATAATGCTGGCTTCATGAACGACAGGCTTTGGGAACTCGAAGTCGATGTTAATTTGAATGGCGTCATCAGAGGTACGCTGCTCGCATATCGGTTTATGGGGAAGGATCGCGGAGGGCAAGGCGGTGTCATCGTGAACACGGCCTCTACAGCATTTGCGAGACCTCAAGTGTCGACTCCGATCTACACAGCAACGAACTACGCTATTGTTGGCCTCACCAGAGCTTACGGGGATCAGTACCACGTCAATATGACCGGAGTGCGATGCCTCGTCGTGTGCCCTGGACTCACGGACAGTGGTTTGGTGAAGGATCTTGACAAGCAGCTTATGTCTTCAAAATACGAGACTGCTTGGCTAGGGGACATTACAGATTCTAAAATGCAGAGCTCTGATCACGTTGGGAGAGCCCTGGTGGATGTACTCGCGAAAGGTCAAAGCGGCTCAGTTTGGATTGTCGAAAACGCTCAGCCGGCTAGGGAGTGGCGCGGCTAA

Protein

MDLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCRLDVTDYPQFEEAFVMTVEEFNRIDIVINNAGFMNDRLWELEVDVNLNGVIRGTLLAYRFMGKDRGGQGGVIVNTASTAFARPQVSTPIYTATNYAIVGLTRAYGDQYHVNMTGVRCLVVCPGLTDSGLVKDLDKQLMSSKYETAWLGDITDSKMQSSDHVGRALVDVLAKGQSGSVWIVENAQPAREWRG

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JQQ4   A0A2A4JPA8   A0A3S2NQL5   A0A2H1WL48   A0A2W1BRA8   A0A0N1INL6   + More
A0A194Q1E5   A0A212FP41   A0A067QWG1   A0A2J7QGZ8   K7IM82   A0A0J7L1B2   E2A713   A0A232ERU5   A0A195B3G3   E9I9W8   A0A195E5P2   F4W475   A0A151X250   A0A195CJP6   A0A195EUB2   A0A158NP60   A0A0C9RAC9   E2B6N1   A0A026WSD7   A0A154PC81   A0A088A4Z7   A0A1B6DW76   D6WGE7   A0A310S8E6   A0A1W4WPT7   A0A2H8TFE7   J9JKN0   A0A2S2NV02   E0VAP2   J9HSC3   A0A1B0CRR2   A0A1W7R8C8   A0A1B0D1S5   J3JUA4   A0A069DQD9   A0A224XI03   A0A182QF31   A0A182VRS1   A0A182LSI1   A0A182NLI5   A0A146M7A4   A0A0A9Z8Q7   A0A0M9A8L6   A0A182XV05   A0A182RPC3   A0A182WSW9   A0A182V3V9   A0A182LA81   A0A182TSI2   A0A182HLS3   A0A2S2R4Y7   Q7PY55   A0A182SMS8   A0A1Y1KU79   A0A2A3ECA0   W5JFH6   A0A182NZC9   A0A1B0GNT7   A0A182FNL1   A0A1W4X0U4   A0A0L7QSV8   T1HQ12   A0A182KA05   A0A182JE34   A0A067R8Z3   A0A0T6B6V3   A0A1W4X358   A0A1Y1MAW1   A0A2P8Z2R9   A0A1W4XDZ2   A0A2J7QR46   A0A2P8Y4B5   D6WT10   A0A140KPR8   D6WG91   A0A2P8ZLP3   R4FLI9   Q6RUR3   A0A2J7QR36   A0A1W4X3A0   A0A084W563   A0A1Y1N5U0   A0A151WLU8   A0A151XEI7   A0A023F7A3   A0A067R8A9   A0A1Y1N8U2   V5GSR5   A0A224XI56   A0A1Y1MYW2   A0A1Y1N8K6   A0A154PE73   A0A023FB52   A0A224XI78  

Pubmed

19121390    28756777    26354079    22118469    24845553    20075255    + More
20798317    28648823    21282665    21719571    21347285    24508170    30249741    18362917    19820115    20566863    17510324    22516182    23537049    26334808    26823975    25401762    25244985    20966253    12364791    14747013    17210077    28004739    20920257    23761445    29403074    24438588    25474469   

EMBL

BABH01012284    BABH01012285    NWSH01000980    PCG73283.1    RSAL01000010    RVE53718.1    + More
ODYU01009339    SOQ53696.1    KZ149967    PZC76155.1    KQ461161    KPJ08013.1    KQ459590    KPI97220.1    AGBW02003646    OWR55516.1    KK852879    KDR14474.1    NEVH01014359    PNF27833.1    LBMM01001364    KMQ96441.1    GL437252    EFN70745.1    NNAY01002548    OXU21079.1    KQ976625    KYM79033.1    GL761846    EFZ22664.1    KQ979609    KYN20169.1    GL887491    EGI71071.1    KQ982585    KYQ54300.1    KQ977642    KYN00938.1    KQ981979    KYN31469.1    ADTU01001531    GBYB01013389    JAG83156.1    GL446000    EFN88615.1    KK107119    QOIP01000009    EZA58571.1    RLU18590.1    KQ434870    KZC09506.1    GEDC01007377    JAS29921.1    KQ971329    EFA01116.1    KQ771134    OAD52541.1    GFXV01001021    MBW12826.1    ABLF02032246    ABLF02032258    GGMR01008279    MBY20898.1    DS235012    EEB10448.1    CH477284    EJY57503.1    AJWK01025142    GEHC01000259    JAV47386.1    AJVK01022288    AJVK01022289    AJVK01022290    APGK01049722    BT126817    KB741156    KB631941    AEE61779.1    ENN73601.1    ERL87393.1    GBGD01002606    JAC86283.1    GFTR01004300    JAW12126.1    AXCN02000138    AXCM01000496    GDHC01004189    JAQ14440.1    GBHO01001997    JAG41607.1    KQ435727    KOX78099.1    APCN01000911    GGMS01015878    MBY85081.1    AAAB01008987    EAA00929.4    GEZM01076510    JAV63760.1    KZ288303    PBC28806.1    ADMH02001291    ETN63127.1    AJVK01029793    KQ414755    KOC61722.1    ACPB03013617    KK852855    KDR14911.1    LJIG01009455    KRT83046.1    GEZM01036109    GEZM01036108    JAV82969.1    PYGN01000223    PSN50783.1    NEVH01011985    PNF31053.1    PYGN01000947    PSN39080.1    KQ971354    EFA05875.1    LN794625    CEO43692.1    KQ971328    EFA00962.1    PYGN01000021    PSN57413.1    ACPB03004191    GAHY01001368    JAA76142.1    AY491503    AAR84629.1    PNF31051.1    ATLV01020510    KE525302    KFB45357.1    GEZM01011996    JAV93302.1    KQ982944    KYQ48859.1    KQ982254    KYQ58773.1    GBBI01001633    JAC17079.1    KK852815    KDR15798.1    GEZM01012000    GEZM01011999    GEZM01011998    GEZM01011997    GEZM01011995    GEZM01011994    GEZM01011993    JAV93300.1    GALX01003804    JAB64662.1    GFTR01004259    JAW12167.1    GEZM01023251    JAV88537.1    GEZM01009878    JAV94252.1    KZC09510.1    GBBI01000005    JAC18707.1    GFTR01004241    JAW12185.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000027135    UP000235965    UP000002358    UP000036403    UP000000311    UP000215335    UP000078540    UP000078492    UP000007755    UP000075809    UP000078542    UP000078541    UP000005205    UP000008237    UP000053097    UP000279307    UP000076502    UP000005203    UP000007266    UP000192223    UP000007819    UP000009046    UP000008820    UP000092461    UP000092462    UP000019118    UP000030742    UP000075886    UP000075920    UP000075883    UP000075884    UP000053105    UP000076408    UP000075900    UP000076407    UP000075903    UP000075882    UP000075902    UP000075840    UP000007062    UP000075901    UP000242457    UP000000673    UP000075885    UP000069272    UP000053825    UP000015103    UP000075881    UP000075880    UP000245037    UP000030765   

PRIDE

H9JQQ4   

Pfam

PF00106   adh_short        + More
PF00612   IQ

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR000048   IQ_motif_EF-hand-BS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JQQ4   A0A2A4JPA8   A0A3S2NQL5   A0A2H1WL48   A0A2W1BRA8   A0A0N1INL6   + More
A0A194Q1E5   A0A212FP41   A0A067QWG1   A0A2J7QGZ8   K7IM82   A0A0J7L1B2   E2A713   A0A232ERU5   A0A195B3G3   E9I9W8   A0A195E5P2   F4W475   A0A151X250   A0A195CJP6   A0A195EUB2   A0A158NP60   A0A0C9RAC9   E2B6N1   A0A026WSD7   A0A154PC81   A0A088A4Z7   A0A1B6DW76   D6WGE7   A0A310S8E6   A0A1W4WPT7   A0A2H8TFE7   J9JKN0   A0A2S2NV02   E0VAP2   J9HSC3   A0A1B0CRR2   A0A1W7R8C8   A0A1B0D1S5   J3JUA4   A0A069DQD9   A0A224XI03   A0A182QF31   A0A182VRS1   A0A182LSI1   A0A182NLI5   A0A146M7A4   A0A0A9Z8Q7   A0A0M9A8L6   A0A182XV05   A0A182RPC3   A0A182WSW9   A0A182V3V9   A0A182LA81   A0A182TSI2   A0A182HLS3   A0A2S2R4Y7   Q7PY55   A0A182SMS8   A0A1Y1KU79   A0A2A3ECA0   W5JFH6   A0A182NZC9   A0A1B0GNT7   A0A182FNL1   A0A1W4X0U4   A0A0L7QSV8   T1HQ12   A0A182KA05   A0A182JE34   A0A067R8Z3   A0A0T6B6V3   A0A1W4X358   A0A1Y1MAW1   A0A2P8Z2R9   A0A1W4XDZ2   A0A2J7QR46   A0A2P8Y4B5   D6WT10   A0A140KPR8   D6WG91   A0A2P8ZLP3   R4FLI9   Q6RUR3   A0A2J7QR36   A0A1W4X3A0   A0A084W563   A0A1Y1N5U0   A0A151WLU8   A0A151XEI7   A0A023F7A3   A0A067R8A9   A0A1Y1N8U2   V5GSR5   A0A224XI56   A0A1Y1MYW2   A0A1Y1N8K6   A0A154PE73   A0A023FB52   A0A224XI78  

PDB

2GDZ     E-value=3.16381e-39,     Score=404

KEGG

101742233    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0016491   GO:0005737   GO:0016404   GO:0004022  

Length:

252

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.29032

Exp number, first 60 AAs:

0.26025

Total prob of N-in:

0.04589

outside

1  -  252

 

 

Pi

176.503139

Theta

162.875197

Tajima's D

0.683101

CLR

0.012638

CSRT

0.564121793910304

Interpretation

Uncertain