Gene

KWMTBOMO06465

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr11(+):7898331-7900835      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.122 Peroxisomal   Reliability : 1.107

CDS

ATGCGTCGCATCTGTGATGCGTCGATGCCCCGGATCGGCCCTCGACTTCCTAATCGCCAGGCGTACTGGTGGTCGCCCGAAATTGCGCAACTCCGCGTGGAGTGCGTTCGGGAGAGGCGCGAGTGCGCCAGGCATCGCCGCCGCCGCCTGCCGCGACGCAATGATCCGGTTGCATTCGCGGCGGAAGAGGTCCGGCTGCACGGCGCATTTCGCGTCGCGCAGAGGGCATTGCAGCTGGCCATCAGAAGAGCCAAGAACCAACACATGGAGAGTCTCTTGGAGACGCTGGATGAGGATCCGTGGGGGCGGCCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCGATCACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGACATCGTCTCGGCGCTGTTCCCGCAGGAGCGGGAGGGATTTATCGCTCCCGCTATGGACGCGCCGCCGGAATACGACGGTGAAGTCCCTGCTGAGGTGCCCCATATAACGGGGGCGGAGCTCCGTGTGGCCGTGCGCAAAATGTGTGCGAAGGACACTGCACCCGGCCCGGACGGCGTCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTAGGGGACCGACTCTTAAGGCTTTACAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTCGTGCTGTTGAGAAAGGAAGGACGCCCGGCGGATACTGCCGCCGGGTACCGTCCCATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCGGCCCGCATCATCCAGCATCTAGTCAGGGTGGGACCCAATCTGTCGGCGGAGCAGTATGGCTTCCGAGAGGGCCGCTCAACGGTAGACGCGATCCTTCGCGTGCGGGCCCTCTCGGAGGAGGCCGTCTCCAGGGGTGGGGTGGCTTTGGCGGTGTCGCTCGACATCGCCAATGCGTTTAACACCCTGCCCTGGTCCGTGATAAGGGGGGCGCTGGAACGACATGGAGTGCCTCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAGGACAGATCGGTCACATGTACCGGACACGGTGGGATCCTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCCCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGAGGTGCCCTCCTCCCGGGCCTGAGCGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGGGGTAGTTTTGCCGAGTCTGCCCGTCTTGCTACCGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGAGCCTGGTCCCTCGTTTGTTGGGGGTGGCCGGCGCGTTAAGCCGGCTTCTGCCCAACGTCGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACGGGGGTGGTGCGATCAATGGCCCTATACGGGGCACCTGTGTGGGGCCAGTCCCTGGCCGCGGGGGTGGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGTTATCGCACCATCTCCTTTGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTTCTGGAAGCGGAGGCGCTCGCCGCTGACTATCAGTGGCGGGCTGACCTTCGTGCCCGGGACGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCCAGACGGCTGGCTGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTCCTTGTGGATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCACAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGACTTGGACACGGCAGAGCATACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGCGACGACGAGTCATGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACGCGCAAGCCCGCCGCCGTCGGGCGGGGGCCAGGGAGGCGGATCTCGCCCAAGCCCTGGCCCTCTAA

Protein

MRRICDASMPRIGPRLPNRQAYWWSPEIAQLRVECVRERRECARHRRRRLPRRNDPVAFAAEEVRLHGAFRVAQRALQLAIRRAKNQHMESLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPQQLRDIVSALFPQEREGFIAPAMDAPPEYDGEVPAEVPHITGAELRVAVRKMCAKDTAPGPDGVHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAARIIQHLVRVGPNLSAEQYGFREGRSTVDAILRVRALSEEAVSRGGVALAVSLDIANAFNTLPWSVIRGALERHGVPPYLRRLVGSYLEDRSVTCTGHGGILHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVSLVPRLLGVAGALSRLLPNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAAGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRADLRARDVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPVLVDWVNRDRGRLTFRLTQVLTGHGCFGEFLHRITAEPTAECHHCGCDLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADLAQALAL

Uniprot

Q868Q4   Q8MY27   Q8MY31   Q8MY35   Q8MY33   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   A0A194R5D3   Q8MY25   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KQK3   A0A0J7KIM6   A0A0J7KJH4   A0A0J7KLH8   A0A3S2LNH8   A0A0J7KWU5   A0A0J7KLT9   A0A0J7KYD2   A0A0J7KF37   A0A0J7NAV8   A0A0J7KPZ3   A0A0J7K366   A0A0J7N0R3   A0A0J7K3F1   A0A0J7KRB8   A0A0J7KFH2   A0A0J7KPR0   A0A0J7K3R6   A0A2S2N8I2   A0A0J7KF40   A0A0J7KL06   J9LJ80   A0A0J7MY17   X1WJY4   A0A0J7NFZ0   A0A2S2PBP5   A0A2S2PEZ7   A0A0J7N7S8   X1WT13   A0A0J7KQY4   A0A0J7KIS5   A0A0J7NJI3   A0A0J7NMN5   J9KJG8   A0A0J7KMU1   A0A2H8TIE5   A0A2S2NJ82   A0A0J7MWN5   A0A2S2P488   A0A0J7KMG5   J9KUM6   A0A2S2NQQ6   A0A0J7KW81   J9KV04   J9JWJ3   J9LVU7   A0A0J7MYL9   X1WZ64   J9KNS1   J9KM84   A0A0J7KF91   A0A023EW96   A0A1W7R6I9   A0A2S2PEU2   W8ANK7   W8ADE4   X1WMW4   J9KT70   A0A034WR48   D6WC19   T1DCM0   A0A2S2P7D1   X1X6F1   F7IYV5   X1WXT5   J9JY94   J9KNN8   A0A1W7R6C5   A0A139W9J0   T1DG89   F7IYU8   J9L6Z9   T1DG59  

Pubmed

12644555    28756777    9092665    26354079    24945155    24495485    + More
25348373    18362917    19820115    24330624   

EMBL

AB090825    BAC57926.1    AB078935    BAC06462.1    AB078931    BAC06456.1    + More
AB078929    BAC06452.1    AB078930    BAC06454.1    KZ149896    PZC78733.1    LBMM01012027    KMQ86470.1    D85594    BAA19776.1    KQ460685    KPJ12887.1    AB078936    BAC06464.1    LBMM01006671    KMQ90407.1    LBMM01006954    KMQ90166.1    LBMM01004272    KMQ92618.1    LBMM01007036    KMQ90099.1    LBMM01006657    KMQ90417.1    LBMM01005948    KMQ91066.1    RSAL01003504    RVE40273.1    LBMM01002480    KMQ94776.1    LBMM01005733    KMQ91252.1    LBMM01002052    KMQ95336.1    LBMM01008448    KMQ88867.1    LBMM01007425    KMQ89740.1    LBMM01004505    KMQ92346.1    LBMM01015565    KMQ84759.1    LBMM01012412    KMQ86235.1    LBMM01015025    KMQ84953.1    LBMM01003988    KMQ92922.1    LBMM01008278    KMQ89009.1    LBMM01004634    KMQ92224.1    LBMM01015018    KMQ84954.1    GGMR01000779    MBY13398.1    LBMM01008422    KMQ88894.1    LBMM01006063    KMQ90967.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    LBMM01014122    KMQ85315.1    ABLF02011238    LBMM01005474    KMQ91485.1    GGMR01014195    MBY26814.1    GGMR01015159    MBY27778.1    LBMM01008682    KMQ88705.1    ABLF02014378    LBMM01004262    KMQ92649.1    LBMM01006977    KMQ90149.1    LBMM01004261    KMQ92650.1    LBMM01003245    KMQ93755.1    ABLF02041886    LBMM01005216    KMQ91703.1    GFXV01002090    MBW13895.1    GGMR01004600    MBY17219.1    LBMM01015285    KMQ84870.1    GGMR01011682    MBY24301.1    LBMM01005465    KMQ91492.1    ABLF02041557    GGMR01006838    MBY19457.1    KMQ94772.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    ABLF02013358    ABLF02013361    ABLF02054869    ABLF02034925    LBMM01013668    KMQ85535.1    ABLF02011183    ABLF02041884    ABLF02018808    ABLF02018942    ABLF02041885    LBMM01008445    KMQ88871.1    GAPW01000192    JAC13406.1    GEHC01000915    JAV46730.1    GGMR01015354    MBY27973.1    GAMC01020517    JAB86038.1    GAMC01020519    GAMC01020515    JAB86040.1    ABLF02059310    ABLF02010223    GAKP01002292    JAC56660.1    KQ971309    EEZ99146.1    GALA01001777    JAA93075.1    GGMR01012748    MBY25367.1    ABLF02016340    AB593325    BAK38646.1    ABLF02004854    ABLF02041317    ABLF02007989    ABLF02023257    GEHC01000964    JAV46681.1    KQ972226    KYB24577.1    GALA01001776    JAA93076.1    AB593321    BAK38639.1    ABLF02021100    GALA01000302    JAA94550.1   

Proteomes

UP000036403    UP000053240    UP000283053    UP000007819    UP000007266   

PRIDE

Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF01421   Reprolysin
PF00098   zf-CCHC

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR024079   MetalloPept_cat_dom_sf       
IPR001590   Peptidase_M12B       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10     3.40.390.10    

ProteinModelPortal

Q868Q4   Q8MY27   Q8MY31   Q8MY35   Q8MY33   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   A0A194R5D3   Q8MY25   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KQK3   A0A0J7KIM6   A0A0J7KJH4   A0A0J7KLH8   A0A3S2LNH8   A0A0J7KWU5   A0A0J7KLT9   A0A0J7KYD2   A0A0J7KF37   A0A0J7NAV8   A0A0J7KPZ3   A0A0J7K366   A0A0J7N0R3   A0A0J7K3F1   A0A0J7KRB8   A0A0J7KFH2   A0A0J7KPR0   A0A0J7K3R6   A0A2S2N8I2   A0A0J7KF40   A0A0J7KL06   J9LJ80   A0A0J7MY17   X1WJY4   A0A0J7NFZ0   A0A2S2PBP5   A0A2S2PEZ7   A0A0J7N7S8   X1WT13   A0A0J7KQY4   A0A0J7KIS5   A0A0J7NJI3   A0A0J7NMN5   J9KJG8   A0A0J7KMU1   A0A2H8TIE5   A0A2S2NJ82   A0A0J7MWN5   A0A2S2P488   A0A0J7KMG5   J9KUM6   A0A2S2NQQ6   A0A0J7KW81   J9KV04   J9JWJ3   J9LVU7   A0A0J7MYL9   X1WZ64   J9KNS1   J9KM84   A0A0J7KF91   A0A023EW96   A0A1W7R6I9   A0A2S2PEU2   W8ANK7   W8ADE4   X1WMW4   J9KT70   A0A034WR48   D6WC19   T1DCM0   A0A2S2P7D1   X1X6F1   F7IYV5   X1WXT5   J9JY94   J9KNN8   A0A1W7R6C5   A0A139W9J0   T1DG89   F7IYU8   J9L6Z9   T1DG59  

PDB

6AR3     E-value=8.24193e-05,     Score=112

KEGG

101737183    no KO assigned | (RefSeq) uncharacterized LOC101737183

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676  

Length:

756

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0729899999999999

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.00106

outside

1  -  756

 

 

Pi

125.909189

Theta

21.670857

Tajima's D

3.027198

CLR

0

CSRT

0.980850957452127

Interpretation

Possibly Balancing Selection