SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06457
Pre Gene Modal
BGIBMGA011611
Annotation
PREDICTED:_activating_transcription_factor_7-interacting_protein_1_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 4.233
 

Sequence

CDS
ATGCAATTAGTCGTTGAATGTCAATCGACTCCAGATATAAAGGCAGACATGTCAGCCCTTGAAGATATACTTGATACAAAATTGTCATCGAATACATTTATTGAAGATCTCAAGACCAACAAGAGCCATCAAGGTAATAAAGAAAATATTTTTGAAGATAATTGCGCTGTTGTTAATGGTAAAGCGAGTATACCGGATACAATTGAAGCGAGTGCAAATACAAATTGCATAGTACCTCACGATGAATTAGAGAATTCAGATTTAGACGAGAAACTGACAGAAAATGACACTGAAGTATCAAAAGGTAATCATACTAATGATCTGTTGCTGGAATCGGATCAAGCCCAAGAAATTGAACAAAAAAACGACAAAGATTCAGCTGAAACACATAAATGCAATTCGGACGGTATTATTTTATTAAACAAGAATCCCGAAATCAAAGTTAGTAGTGAATTTTCGATCGGTCCTAAAGTCTCTGCTGAAGAAGATATAAAAATATCTCAAAATGCTCCCGATCCTGTTGAACGAATAGATGACAAAGATGAGTGTCAGCAACAAGAAAATCCCGAAAAGGTACACAAAGGGTCGAATATAGAACTTAATAATTCTGTTTCTGATCATATTCAAAGTATTAATGAATATAGCGAAATTGCTGTACCTATCAAGAAAGATGAGGTATTAACTATGGAAGTGGTCGATCATGATTCCACTAATATTGTAATAAACAGTGCAGATACTGTTGTTATTGTTCAAGACGATGTAAAAGACAAATCAGAATCAACGGCTCAAAATACTACCGATTCTTGTGACGGAATAGACAACAAAGAAGATAACAGCAAAAAAACCCCTGATAAGGTATGCAGCGATTCTGATAATGAAAACACCATTGAGAAGCGCGAAAAGATGGAAGAAGAAGAAAATATAACTTTAGAGGTAATCGATGTAGATAAAGATGAAAAAAACGCTATAGATACTGTTGATCTTCAAAACGAATTATGTAAAGAAACACAGTCGAGTAATGCAGTATTTTGCAGTGAAACTGAAATACAACCTGTTGAGATTCCCATCGTATCACAAAACGCAAACAGCTTCAGCTCTCCAAATCAGGCAATGGAAGTCGACACTTCACCAGCACTGAAACCTCCGGAAACTTCGATTTCAAATGTACATATTGTGGATCTAGATGAAGTTACGGATAGCACAACCAACAGTCAAACAGCAGATAAATCTGAAGCTTTAGCTGAAATACAAAAAGAGCCGGTAAAAAAGGTTTGCAGACTCTCGAATACGCTAGATATACTCTCAGATGAAGAAGATGAATTAGCCAATACAAAAAATACACCTGAAGTAGTAATAAATGAGAAACCTGTAGAAAAACATTGTATTAATATAGAAGATGATGATGATATAATGGTTATAGAAGATACCAAAGAACCAAACAGGGAAATGTTGACAAACAAATCTGACACAACAGCTGATGGAACAAAAGAAATAACTGTAGAAGTTACCGTTGAAAACGGAGAGCAGAAATCAAATTTTATGGAGTCAATTGAGTTGTCGTGCAACAAAGTCACAAAAGGCGATGATTCCGAACATTCCAAACCAGACGAAACCCTCAAAGTTAAAAGTCCCGAAAAGCTATTCAAAGGTCCCGATGAAACAAAACTAGAAAAAATCACAGATAAACCTTTAGTACCCACAGATTTCCTAAAAACATCCAAGAAAACTTTGGCCAGCATGACTAGAGAGGAGCTCGAGGAATTTTGTATTTTAAAAATAGTGGAAAGTGTCGTTGATAGAATTAATCTCGCAGACACGCAATCGAATCTGAAAACATTAGCACAAAGTCTGGATGACTATGAGAAGAAGACTAAAATGCTTGCAAAGCAAAACAGAGATCTCCAGGTCGTCCTAAAGTCTATCCAAGAAGAACAAAAGAAGACCTTCAGTAACTCAAAACCAATAACTCCATTGAAAATTACAAGATCCGTGGGAATGCAAGTGTTGATGACAGATAAATCATCGCTCATGTTGCGAAAAAAAGTACCGCAAGCACCCAGCGCAGTTCCACCATTGAGCATAATAAAAACAAGGAATCAGAATAATCAAAGTCCTCAAAGGAGTCAAGCTTCATCAAAAGCTCCAACGAATAACGAAAATATTCCAGTTCCAAGGTTGATACCGGCGAGCAACAATACAGCGAAGAACAATCCTAAACCAACTAGTCCCCCGAGTTCCAGTAAAGCCTCCGTTAGTCCTATGAACGGCTTACGCAGCAATACCGCCCAGAAAATCCCCGAAAAACGAACACTATCTAAAGATACGTCCGTAACGGTAGACCTGACTGATGACGAGCCACCCAATAAGGTTGTCGCTCGTAATCCACAACCGCCTGTACGCCTTGTTTCACCGCAAACTCTCATGGGCCCGCAAAGATCACATTTTGGTCAGGGGATAGCCAATAGCCATCGGAAAGTGTTCATTCCCATTAGTGGTCCTGGTCCGAACGGTCAAGCGAGGAGTACTCAAGCTGTTCTGATTAAACCACACCCGCCCGGTATGCAAAGACCTAGAACCGCGGCACCTAATATCGGCAGGGCTCAAAATCAAATTAAAACGAACAAACCTAATCAGGTGCACAGGCACCCGGCACCCATGCCCGAGATTATGAAGCAGTACCATCCACCTAACTGGAAAGCGCTCCCGCCCGCACCCGATTTGAAACTTTCCAAAGTAGAAAACGGTATAGTGATATCCTGGAAAATCAATGGATACCAGGAAGATAGTTACGAAGAAATAGCCAGCTATCAACTGTACGCTTACCAAGAGACGTCGGCGCCGCCTAGCACCGCCTTGTGGAAAAAAATTGGCGACGTGAAGGCTCTGCCTCTGCCCATGGCGTGCACTCTTACGCAGTTCACGGCAGGCTACAGCTATTATTTCGCGGTTAGGGCAGTAGACGTAAAATCCCGCCTCGGACCCTTCAGCGAACCTGGAAGCATATTACTACCCAACAAAATTTAA
Protein
MQLVVECQSTPDIKADMSALEDILDTKLSSNTFIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIEASANTNCIVPHDELENSDLDEKLTENDTEVSKGNHTNDLLLESDQAQEIEQKNDKDSAETHKCNSDGIILLNKNPEIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSNIELNNSVSDHIQSINEYSEIAVPIKKDEVLTMEVVDHDSTNIVINSADTVVIVQDDVKDKSESTAQNTTDSCDGIDNKEDNSKKTPDKVCSDSDNENTIEKREKMEEEENITLEVIDVDKDEKNAIDTVDLQNELCKETQSSNAVFCSETEIQPVEIPIVSQNANSFSSPNQAMEVDTSPALKPPETSISNVHIVDLDEVTDSTTNSQTADKSEALAEIQKEPVKKVCRLSNTLDILSDEEDELANTKNTPEVVINEKPVEKHCINIEDDDDIMVIEDTKEPNREMLTNKSDTTADGTKEITVEVTVENGEQKSNFMESIELSCNKVTKGDDSEHSKPDETLKVKSPEKLFKGPDETKLEKITDKPLVPTDFLKTSKKTLASMTREELEEFCILKIVESVVDRINLADTQSNLKTLAQSLDDYEKKTKMLAKQNRDLQVVLKSIQEEQKKTFSNSKPITPLKITRSVGMQVLMTDKSSLMLRKKVPQAPSAVPPLSIIKTRNQNNQSPQRSQASSKAPTNNENIPVPRLIPASNNTAKNNPKPTSPPSSSKASVSPMNGLRSNTAQKIPEKRTLSKDTSVTVDLTDDEPPNKVVARNPQPPVRLVSPQTLMGPQRSHFGQGIANSHRKVFIPISGPGPNGQARSTQAVLIKPHPPGMQRPRTAAPNIGRAQNQIKTNKPNQVHRHPAPMPEIMKQYHPPNWKALPPAPDLKLSKVENGIVISWKINGYQEDSYEEIASYQLYAYQETSAPPSTALWKKIGDVKALPLPMACTLTQFTAGYSYYFAVRAVDVKSRLGPFSEPGSILLPNKI

Summary

Pfam
PF16794   fn3_4
Interpro
IPR026085   ATF7-int        + More
IPR003961   FN3_dom       
ProteinModelPortal

Ontologies

Topology

Length:
1007
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.56089
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  1007
 
 

Population Genetic Test Statistics

Pi
282.545902
Theta
225.227677
Tajima's D
0.786591
CLR
0.023155
CSRT
0.592570371481426
Interpretation
Uncertain
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