Gene

KWMTBOMO06456

Pre Gene Modal

BGIBMGA011869

Annotation

PREDICTED:_uncharacterized_protein_LOC101743192_[Bombyx_mori]

Location

Bomo_Chr11(-):7620922-7627010      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.635

CDS

ATGATTCTACCGCGTGTTGCGCAACAAAATATTTTGAACTGTAGGTCAATAAGTGGTTCGCGATGTTGTTATCAAAACTTGGAAAGTAAATACTCGGAAAGTCAAAAAGTGAAAATACTAAATGTAATTAATGATGATTCTCAAACATTGTCAAGGTTTGATATAGCAAAGTCAAGATTAAAAAAGTTTAAACAATGGAAAACTAGCAATGGTCAAGTGAAGACCCTATCTGATTTACCTTTAATAGAAGGTTTCACTGACAAGACAGCTAAGAAACTCTGTGACAGTATATTAAATGGACCCACTGAAGAAGTTGAACAAATATCAAATAAAATAAAAGGTCAAATATTACATCCAAATTTGAAAGAAAGTACTATTAAAGACTGTAAAACAGTATTGACAGTATATATATCTGTTAATTCAGTTTGTTGGACGCTTATAAACAAAAATGATTATGAAGTTGTGGAGTGGCAGTATTATGGTATTGATTACCCCGAAGGAAAGAAGATTCAGATCACAGATATATTTGATATTGCATGGCGTATAACGCAGCGGTTACCGGTCGCTGACATTTATGTGATGAAAGCTGAAGCTACCACTTTGCGAGCGGCCGGTAGCGATCCGAACAATCCTAAAGTATTGGCTGTAAATCTTCAGAAAGCTCAAATGGTCTCTATGATTGTTGCATTGATTAACGCACGAGGACACAGAAGTGACGATGACGATGGTAAATTGAAACAGATTGTTTATTTTTTGAGGCCCACATTACCCTACAGGCTACACGGAACTTTAGTTGGAAACGAAAGAGTGTCGACTGATCAAACCGTCGAAATGTTACTTCAGGAGAGCAGTGGTAAATCAACAGGCAACAAACACGTCTACGTGCCGGAGGAAGGGAAAAACATGTTCAGGACACAGAACGAACTACAGAAGGACATGTTGGGACATTGTCTGTTACTTAGTTTGACTTTTATGGATTTGTGTGTTTACAAGAACAAGGAGCGCATCGCGAAATTAATTAAGAGGACTTCTTGA

Protein

MILPRVAQQNILNCRSISGSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISNKIKGQILHPNLKESTIKDCKTVLTVYISVNSVCWTLINKNDYEVVEWQYYGIDYPEGKKIQITDIFDIAWRITQRLPVADIYVMKAEATTLRAAGSDPNNPKVLAVNLQKAQMVSMIVALINARGHRSDDDDGKLKQIVYFLRPTLPYRLHGTLVGNERVSTDQTVEMLLQESSGKSTGNKHVYVPEEGKNMFRTQNELQKDMLGHCLLLSLTFMDLCVYKNKERIAKLIKRTS

Uniprot

H9JQR3   A0A2W1BUX4   A0A2A4K9L3   A0A2H1WVD6   A0A0N1PH52   A0A194Q1C5   + More
A0A212ELU7   A0A2P8XE23   A0A1J1I3U8   A0A1W4URC5   A0A067QYD0   A0A2J7QGZ2   A0A1Y1KF72   B4N5G2   B4KYJ1   D6WF54   B4HC18   Q16YC8   A0A1S4FK08   Q29F15   A0A023EQB2   B4J3Q1   A0A0K8W3L1   A0A0A1XGT1   A0A182IQW6   A0A034W8H5   B4LDY5   A0A1I8QB38   A0A0M4F0T2   A0A084WHJ9   W8CBT7   Q9VNR9   A0A182QT18   A0A3B0JUA2   B4QLA0   B4IB37   A0A182WG71   N6TSB9   A0A182MYN4   B3MB80   B4PIP6   A0A182RTI9   A0A182MS58   A0A182P6I1   A0A0J7KIR1   Q5TN70   A0A182UH13   A0A182SV23   A0A182WZL7   A0A182V4A6   A0A182HQ63   A0A182JZ05   A0A1B0B6X3   A0A182Y1P5   A0A2M4BS69   A0A182FW68   A0A2M4AUR5   A0A0T6B6M6   A0A2M4AUX8   E9IUR0   E2ACB6   A0A0L0C8C7   A0A1B0EXZ7   A0A1I8MS43   B0WFZ5   A0A1A9WD82   A0A026WZM7   A0A3L8DPS2   A0A2M4BQU4   A0A0Q5UL26   A0A1A9VFA8   A0A1B0A2D3   W5JIQ5   A0A195DXY4   A0A1B0FB80   F4WZN9   A0A195B6X2   A0A158NH77   A0A1B6BW40   A0A151XCU8   A0A195FFI4   A0A1A9Y0Y5   A0A1B6ERF1   A0A1B6HEL0   A0A232FKF6   A0A3B1JWN3   A0A293MU96   A0A2M4AXM3   A0A1B6M7L5   A0A060X5C3   A0A1S3L5U4   A0A3Q1HIP3   A0A1A8IR40   A0A2R5LMS0  

Pubmed

19121390    28756777    26354079    22118469    29403074    24845553    + More
28004739    17994087    18362917    19820115    17510324    15632085    24945155    25830018    25348373    24438588    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    23537049    17550304    12364791    14747013    17210077    25244985    21282665    20798317    26108605    25315136    24508170    30249741    20920257    23761445    21719571    21347285    28648823    25329095    24755649   

EMBL

BABH01012358    BABH01012359    BABH01012360    KZ149896    PZC78769.1    NWSH01000006    + More
PCG80985.1    ODYU01010947    SOQ56374.1    KQ460391    KPJ15403.1    KQ459590    KPI97200.1    AGBW02013978    OWR42464.1    PYGN01002565    PSN30256.1    CVRI01000040    CRK95015.1    KK852879    KDR14455.1    NEVH01014359    PNF27856.1    GEZM01087213    JAV58840.1    CH964101    EDW79601.1    CH933809    EDW18802.2    KQ971327    EEZ99841.2    CH479275    EDW40049.1    CH477518    EAT39642.1    CH379070    EAL29894.2    GAPW01002325    JAC11273.1    CH916366    EDV97282.1    GDHF01006566    JAI45748.1    GBXI01004125    JAD10167.1    GAKP01007081    JAC51871.1    CH940647    EDW70028.1    CP012525    ALC44800.1    ATLV01023844    KE525347    KFB49693.1    GAMC01004531    JAC02025.1    AE014296    AY071634    AAF51853.1    AAL49256.1    AXCN02001036    OUUW01000002    SPP76301.1    CM000363    CM002912    EDX11518.1    KMZ01218.1    CH480826    EDW44500.1    APGK01021195    KB740293    ENN80953.1    CH902618    EDV41381.1    CM000159    EDW95554.1    AXCM01002364    LBMM01006992    KMQ90137.1    AAAB01008986    EAL38690.3    APCN01003297    JXJN01009258    GGFJ01006497    MBW55638.1    GGFK01011216    MBW44537.1    LJIG01009476    KRT83004.1    GGFK01011250    MBW44571.1    GL766012    EFZ15714.1    GL438491    EFN68906.1    JRES01000763    KNC28482.1    AJVK01033360    DS231921    EDS26530.1    KK107063    EZA61181.1    QOIP01000005    RLU22424.1    GGFJ01006314    MBW55455.1    CH954178    KQS44434.1    ADMH02001285    ETN63173.1    KQ980107    KYN17686.1    CCAG010017825    GL888480    EGI60314.1    KQ976574    KYM80246.1    ADTU01015205    GEDC01031786    JAS05512.1    KQ982294    KYQ58202.1    KQ981625    KYN39116.1    GECZ01029321    JAS40448.1    GECU01034588    JAS73118.1    NNAY01000084    OXU31142.1    GFWV01018803    MAA43531.1    GGFK01012213    MBW45534.1    GEBQ01008050    JAT31927.1    FR904998    CDQ74763.1    HAED01013346    SBQ99791.1    GGLE01006710    MBY10836.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000245037    + More
UP000183832    UP000192221    UP000027135    UP000235965    UP000007798    UP000009192    UP000007266    UP000008744    UP000008820    UP000001819    UP000001070    UP000075880    UP000008792    UP000095300    UP000092553    UP000030765    UP000000803    UP000075886    UP000268350    UP000000304    UP000001292    UP000075920    UP000019118    UP000075884    UP000007801    UP000002282    UP000075900    UP000075883    UP000075885    UP000036403    UP000007062    UP000075902    UP000075901    UP000076407    UP000075903    UP000075840    UP000075881    UP000092460    UP000076408    UP000069272    UP000000311    UP000037069    UP000092462    UP000095301    UP000002320    UP000091820    UP000053097    UP000279307    UP000008711    UP000078200    UP000092445    UP000000673    UP000078492    UP000092444    UP000007755    UP000078540    UP000005205    UP000075809    UP000078541    UP000092443    UP000215335    UP000018467    UP000193380    UP000087266    UP000265040   

PRIDE

H9JQR3    Q9VNR9   

Pfam

PF01412   ArfGap

Interpro

IPR039150   TEFM        + More
IPR010994   RuvA_2-like       
IPR001164   ArfGAP_dom       
IPR038508   ArfGAP_dom_sf       
IPR037278   ARFGAP/RecO       
IPR040000   NOP9       
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR001313   Pumilio_RNA-bd_rpt       

SUPFAM

SSF47781   SSF47781        + More
SSF57863   SSF57863       
SSF48371   SSF48371       

Gene 3D

3.30.40.160     1.25.10.10    

ProteinModelPortal

H9JQR3   A0A2W1BUX4   A0A2A4K9L3   A0A2H1WVD6   A0A0N1PH52   A0A194Q1C5   + More
A0A212ELU7   A0A2P8XE23   A0A1J1I3U8   A0A1W4URC5   A0A067QYD0   A0A2J7QGZ2   A0A1Y1KF72   B4N5G2   B4KYJ1   D6WF54   B4HC18   Q16YC8   A0A1S4FK08   Q29F15   A0A023EQB2   B4J3Q1   A0A0K8W3L1   A0A0A1XGT1   A0A182IQW6   A0A034W8H5   B4LDY5   A0A1I8QB38   A0A0M4F0T2   A0A084WHJ9   W8CBT7   Q9VNR9   A0A182QT18   A0A3B0JUA2   B4QLA0   B4IB37   A0A182WG71   N6TSB9   A0A182MYN4   B3MB80   B4PIP6   A0A182RTI9   A0A182MS58   A0A182P6I1   A0A0J7KIR1   Q5TN70   A0A182UH13   A0A182SV23   A0A182WZL7   A0A182V4A6   A0A182HQ63   A0A182JZ05   A0A1B0B6X3   A0A182Y1P5   A0A2M4BS69   A0A182FW68   A0A2M4AUR5   A0A0T6B6M6   A0A2M4AUX8   E9IUR0   E2ACB6   A0A0L0C8C7   A0A1B0EXZ7   A0A1I8MS43   B0WFZ5   A0A1A9WD82   A0A026WZM7   A0A3L8DPS2   A0A2M4BQU4   A0A0Q5UL26   A0A1A9VFA8   A0A1B0A2D3   W5JIQ5   A0A195DXY4   A0A1B0FB80   F4WZN9   A0A195B6X2   A0A158NH77   A0A1B6BW40   A0A151XCU8   A0A195FFI4   A0A1A9Y0Y5   A0A1B6ERF1   A0A1B6HEL0   A0A232FKF6   A0A3B1JWN3   A0A293MU96   A0A2M4AXM3   A0A1B6M7L5   A0A060X5C3   A0A1S3L5U4   A0A3Q1HIP3   A0A1A8IR40   A0A2R5LMS0  

KEGG

101743192    K17658 transcription elongation factor, mitochondrial | (RefSeq) uncharacterized LOC101743192

GO

GO:0006392   GO:0005739   GO:0003746   GO:0046872   GO:0005096   GO:0003723  

PANTHER

PTHR21053   PTHR13102  

Length:

344

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.62451

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02858

outside

1  -  344

 

 

Pi

26.715049

Theta

18.834948

Tajima's D

1.620735

CLR

0.454536

CSRT

0.821208939553022

Interpretation

Uncertain