Gene

KWMTBOMO06440

Pre Gene Modal

BGIBMGA011877

Annotation

glutamate_[NMDA]_receptor-associated_protein_1_[Bombyx_mori]

Location

Bomo_Chr11(-):7122230-7138060      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.465

CDS

ATGTATCAGAATCAAGGCGGACCGTACCCTCAGGGCGGGGCGTACCCGCAAGGTGGACCGTACCCGCAAGGTGGACCGTACCCACAGGGTGGAGGTTACCCGCAAGGTGGAGCTTACCCTCCAGGAGGAGCGTATCCCCCGGGTGGAGCATACCCGCAGGGCGGATATGCGCCCCCTCAGCCTGGCTTCCAACCTGCATATGGCGGCGCTGGTTACGGTGAACCGGGCTATATCCCACCGAACGACTCAGTCGGCGAAGATGGCGAAGTCAAGGGTTTCGATTTCACTGAAAAATCTATACGCAGGGCTTTCATCCGAAAGGTGTACGCGATCCTGATGTGTCAGCTGATGGTGACGATGGGTTTCATCGCTCTGTTCCTGTACCACCGACCGACCAAAGTCTGGGTGGCCCAAAATCCCTTCATGTTCTGGGTGGCCTTCATAGTGCTGATAGTCTGTCTCATCGCGATGGCGTGCTGTCCCGACGTGAGACGCAAAGCTCCGACGAACTTCATATTCCTGGCCATCTTCACGGCAGCGCAGAGCTTCCTGCTCGGCATTAGCGCAAGCGTCTACGAAGCGGATGCGGTGCTGATGGCAGTTGGCATAACGGCGGCCGTGTGCCTGGGCTTGACTCTGTTCGCTCTGCAGACCAAGTGGGACTTCACCATGATGGGCGGCGTGCTGCTCTGCGCCACCATCGTCCTCCTTGTATTCGGTATCGTGGCCATATTCGTGAAAGGTAAGGTCATAACGCTCGTGTACGCGTCCCTGGGCGCTCTCATATTCTCCATTTACCTCGTCTACGACACCCAGCTGATGATGGGGGGCAAGCACAAGTACAGCATCTCGCCCGAGGAGTACATCTTCGCGGCCCTCAACCTCTACTTGGACATCATCAACATATTCCTGTTCATTCTGACCATCATCGGAGCTTCAAGAGATTAG

Protein

MYQNQGGPYPQGGAYPQGGPYPQGGPYPQGGGYPQGGAYPPGGAYPPGGAYPQGGYAPPQPGFQPAYGGAGYGEPGYIPPNDSVGEDGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVKGKVITLVYASLGALIFSIYLVYDTQLMMGGKHKYSISPEEYIFAALNLYLDIINIFLFILTIIGASRD

Similarity

Belongs to the BI1 family.

Uniprot

H9JQS1   Q2F693   Q2F692   A0A2A4JM66   A0A2A4JLM1   A0A2W1C3L4   + More
A0A3S2M196   A0A1L8DK42   A0A1L8DJZ8   A0A1L8DKA9   U5EY08   A0A1Q3EUD2   A0A182SF74   A0A182IQ08   Q5TRL3   A0A182WQT0   A0A1W4XJ16   A0A2C9GQR4   W5JPG5   A0A182TXT8   A0A182X553   A0A182LJH3   A7UTR0   A0A2C9GQR2   A0A2M4BUG9   A0A2M3ZGT0   A0A2M4CRS4   T1DGP6   A0A2M4BTA8   A0A2M3Z2V5   A0A182MVD9   T1E228   A0A182VJ61   T1EAT3   A0A2M4CRY2   A0A023EPM2   Q16QI8   A0A2M4AA33   A0A2M4AA16   A0A1S4FSQ3   A0A1E1W7J0   A0A2M4A946   A0A084VZ81   A0A1E1WGD1   A0A1W4XJF1   A0A1W4XUF6   N6TD50   A0A182NM25   B0X8G1   A0A182RN19   A0A1Q3FMX7   A0A182PP58   J3JY12   U4UT76   A0A182QQZ0   A0A182Y0Z8   A0A182K795   A0A182FHG0   A0A0Q9WVY7   A0A2J7PJT8   B4MJR1   A0A0Q9XJF3   B4KRH2   A0A0C9R6S2   V5G443   Q95T37   Q7JR91   B4HPX7   Q7JRM9   A0A0Q9WF45   A0A0J9U0B9   A0A0J9RBG8   B4LQ63   A0A034WJ36   B4QDI4   A0A0K8WLW1   D3TMS5   A0A1B0BE76   A0A1A9USR0   A0A1A9XN90   A0A034WGH2   A0A1B0A9G2   A0A0K8WDV8   A0A0K8VIN0   A0A0K8URV4   A0A0M4EC74   A0A0A1XD01   A0A1W4VQN1   A0A195E5H6   A0A0Q5VMP3   A0A0A1WV96   A0A0Q5VNB9   A0A1W4VCL5  

Pubmed

19121390    28756777    12364791    14747013    17210077    20920257    + More
23761445    20966253    24330624    24945155    17510324    24438588    23537049    22516182    23517120    25244985    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25348373    20353571    25830018    18057021   

EMBL

BABH01012391    DQ311179    ABD36124.1    DQ311180    ABD36125.1    NWSH01001090    + More
PCG72674.1    PCG72676.1    KZ149896    PZC78753.1    RSAL01000076    RVE48854.1    GFDF01007303    JAV06781.1    GFDF01007302    JAV06782.1    GFDF01007304    JAV06780.1    GANO01000662    JAB59209.1    GFDL01016124    JAV18921.1    AAAB01008960    EAL39852.3    APCN01004290    ADMH02000483    ETN66287.1    EDO63682.1    EDO63683.1    GGFJ01007501    MBW56642.1    GGFM01006897    MBW27648.1    GGFL01003862    MBW68040.1    GALA01001581    JAA93271.1    GGFJ01007093    MBW56234.1    GGFM01002096    MBW22847.1    AXCM01003248    GALA01001580    JAA93272.1    GAMD01000768    JAB00823.1    GGFL01003861    MBW68039.1    GAPW01002625    JAC10973.1    CH477747    EAT36652.1    GGFK01004281    MBW37602.1    GGFK01004280    MBW37601.1    GDQN01008140    JAT82914.1    GGFK01003929    MBW37250.1    ATLV01018617    KE525239    KFB43275.1    GDQN01011336    GDQN01005001    JAT79718.1    JAT86053.1    APGK01042700    KB741007    ENN75623.1    DS232488    EDS42497.1    GFDL01006094    JAV28951.1    BT128135    GABX01000002    AEE63096.1    JAA74517.1    KB631811    KI207771    ERL86343.1    ERL95733.1    AXCN02002327    CH963846    KRF97540.1    NEVH01024946    PNF16588.1    EDW72350.1    CH933808    KRG05218.1    EDW10398.1    GBYB01012034    JAG81801.1    GALX01003661    JAB64805.1    AY060346    AE013599    AAL25385.1    AAM68615.1    AGB93462.1    BT003175    BT015290    AAM68612.1    AAM68613.1    AAO24930.1    AAT94519.1    AFH08042.1    AFH08043.1    CH480816    EDW47640.1    BT001413    AAF58446.1    AAM68614.1    AAM68616.2    AAN71168.1    CH940648    KRF79935.1    CM002911    KMY93365.1    KMY93363.1    KMY93364.1    KMY93366.1    EDW61348.1    GAKP01005169    JAC53783.1    CM000362    EDX06849.1    KMY93361.1    GDHF01000469    JAI51845.1    EZ422727    ADD19003.1    JXJN01012807    GAKP01005168    JAC53784.1    GDHF01003047    JAI49267.1    GDHF01022575    GDHF01013601    GDHF01012866    JAI29739.1    JAI38713.1    JAI39448.1    GDHF01022880    GDHF01019505    GDHF01003837    JAI29434.1    JAI32809.1    JAI48477.1    CP012524    ALC41277.1    GBXI01005486    JAD08806.1    KQ979609    KYN20152.1    CH954179    KQS62780.1    KQS62782.1    KQS62784.1    GBXI01011989    JAD02303.1    KQS62785.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000075901    UP000075880    UP000007062    + More
UP000075920    UP000192223    UP000075840    UP000000673    UP000075902    UP000076407    UP000075882    UP000075883    UP000075903    UP000008820    UP000030765    UP000019118    UP000075884    UP000002320    UP000075900    UP000075885    UP000030742    UP000075886    UP000076408    UP000075881    UP000069272    UP000007798    UP000235965    UP000009192    UP000000803    UP000001292    UP000008792    UP000000304    UP000092460    UP000078200    UP000092443    UP000092445    UP000092553    UP000192221    UP000078492    UP000008711   

PRIDE

H9JQS1    Q2F693    Q2F692    Q95T37    Q7JR91    Q7JRM9    + More

Pfam

PF01027   Bax1-I

Interpro

IPR006214   Bax_inhibitor_1-related       

ProteinModelPortal

H9JQS1   Q2F693   Q2F692   A0A2A4JM66   A0A2A4JLM1   A0A2W1C3L4   + More
A0A3S2M196   A0A1L8DK42   A0A1L8DJZ8   A0A1L8DKA9   U5EY08   A0A1Q3EUD2   A0A182SF74   A0A182IQ08   Q5TRL3   A0A182WQT0   A0A1W4XJ16   A0A2C9GQR4   W5JPG5   A0A182TXT8   A0A182X553   A0A182LJH3   A7UTR0   A0A2C9GQR2   A0A2M4BUG9   A0A2M3ZGT0   A0A2M4CRS4   T1DGP6   A0A2M4BTA8   A0A2M3Z2V5   A0A182MVD9   T1E228   A0A182VJ61   T1EAT3   A0A2M4CRY2   A0A023EPM2   Q16QI8   A0A2M4AA33   A0A2M4AA16   A0A1S4FSQ3   A0A1E1W7J0   A0A2M4A946   A0A084VZ81   A0A1E1WGD1   A0A1W4XJF1   A0A1W4XUF6   N6TD50   A0A182NM25   B0X8G1   A0A182RN19   A0A1Q3FMX7   A0A182PP58   J3JY12   U4UT76   A0A182QQZ0   A0A182Y0Z8   A0A182K795   A0A182FHG0   A0A0Q9WVY7   A0A2J7PJT8   B4MJR1   A0A0Q9XJF3   B4KRH2   A0A0C9R6S2   V5G443   Q95T37   Q7JR91   B4HPX7   Q7JRM9   A0A0Q9WF45   A0A0J9U0B9   A0A0J9RBG8   B4LQ63   A0A034WJ36   B4QDI4   A0A0K8WLW1   D3TMS5   A0A1B0BE76   A0A1A9USR0   A0A1A9XN90   A0A034WGH2   A0A1B0A9G2   A0A0K8WDV8   A0A0K8VIN0   A0A0K8URV4   A0A0M4EC74   A0A0A1XD01   A0A1W4VQN1   A0A195E5H6   A0A0Q5VMP3   A0A0A1WV96   A0A0Q5VNB9   A0A1W4VCL5  

KEGG

692817    K06890 uncharacterized protein | (RefSeq) Grina, Nmda1; glutamate [NMDA] receptor-associated protein

GO

GO:0016021   GO:0005544   GO:0005509  

PANTHER

PTHR23291  

Length:

315

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

148.46318

Exp number, first 60 AAs:

0.00127

Total prob of N-in:

0.99404

inside

1  -  107

TMhelix

108  -  130

outside

131  -  139

TMhelix

140  -  157

inside

158  -  169

TMhelix

170  -  192

outside

193  -  196

TMhelix

197  -  216

inside

217  -  222

TMhelix

223  -  245

outside

246  -  249

TMhelix

250  -  269

inside

270  -  289

TMhelix

290  -  312

outside

313  -  315

 

 

Pi

215.269076

Theta

166.150117

Tajima's D

1.084056

CLR

0.665264

CSRT

0.674116294185291

Interpretation

Uncertain