SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06439
Pre Gene Modal
BGIBMGA011878
Annotation
PREDICTED:_uncharacterized_protein_LOC106121504_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.282
 

Sequence

CDS
ATGACCGCTTTGCTGATATTATTCACATTATTTATAATTTTATTGACCTACGCCTTCAAGCTTAAAGATCGCAAACCGATATTTGGTATCTACGCCGTACCGGGGAAGTGGTATTATTTAAAATATGTCGTTTTCGGAGCTCTTTATTATTACAGAAAGTATTCAAGTAAGAATTCGGCTGCCGGTAATGATGGTCGGGCCGGGCAAGGCGTTAAGGCCATAGCCGATCCAGCTGACATGGAGCGAGCACAACCATTGAGCGACCATGCTAAGGCTTTCGATGCCATATTCTTTATATCATCGAAAAGTGAAAACGGAAAGGGCGTATACATCATTAGCGGCTGCGAACAAAGACCGATGGGAATGTGCAACGGACTGTTTTATATCGGACTCCCAGGAAAAGGTCTTCTCTGCAGCAAGAAGATACCGGACACAGTCCTTTTTGGAGCTGAAATAGGAGAGTTCGGCGCTGAAGGGATCAAGATGACACCGGTTGAACCTATGAAGAAGTGGAATATCTCTTACAAGGGACAGATGTGGTACCAAAACAACCCCAGTAAGTTTGTCGATGTGGACTTCACCGGAGAGTGGACAGCCACTACGAAATACTTTGATTTCGACACAGATTTGTATCCTGCGACCGTCATCAGGTCAATAGCCAAAGAAAAATGGAGCAGAGAATACTTTGAATTGCTTAAAACAGCTCACCAGTCACACTACGAACAGTTCGGCAACTTAAAATGCAAGTTCAAAATAGGGGAAGAATCATTTGAATACACTCTGCCTTCCTTCAGAGATCATAGTTTTGGCCATAAACGTGACTGGACTCTTATGTACCGATATGCTTTCCATCATATCTTTTTGGAAGACGGCACCAGCATCAGCGTTGGAGTCATCTGCCAGCCATCTACTGCTTCCGTGTTTGAAGCCGGTTGGATAGCCTTGCCAAACAAAGAGTCATATCCCGTGAAATGGGTGGATTTGAAGTTATACCAACACGGAGAAGGGGGGCAGGCTCCTAAGGACTACGCTTTCCAATTCAAGGCTGGAGACGAAGAGTACACAGTTCAGGTCCTAGTGGAATACGAATCAATCCACTACGTATCCGACGAATGGGATGCTCGTATGGTGGAGAGATTCTGCAAGTTCACCGTCAACAACATCCCGGGACGAGGCGTTTCGGAGTTCCACTACCGACATACCGATGGTCGGCCTGAAAGTGTTGCGAAAAACGATCCGGAGTGGTACAGGAAAATGTGTCACAAGATTTAA
Protein
MTALLILFTLFIILLTYAFKLKDRKPIFGIYAVPGKWYYLKYVVFGALYYYRKYSSKNSAAGNDGRAGQGVKAIADPADMERAQPLSDHAKAFDAIFFISSKSENGKGVYIISGCEQRPMGMCNGLFYIGLPGKGLLCSKKIPDTVLFGAEIGEFGAEGIKMTPVEPMKKWNISYKGQMWYQNNPSKFVDVDFTGEWTATTKYFDFDTDLYPATVIRSIAKEKWSREYFELLKTAHQSHYEQFGNLKCKFKIGEESFEYTLPSFRDHSFGHKRDWTLMYRYAFHHIFLEDGTSISVGVICQPSTASVFEAGWIALPNKESYPVKWVDLKLYQHGEGGQAPKDYAFQFKAGDEEYTVQVLVEYESIHYVSDEWDARMVERFCKFTVNNIPGRGVSEFHYRHTDGRPESVAKNDPEWYRKMCHKI

Summary

Cofactor
Zn(2+)
Similarity
Belongs to the peptidase M3 family.
EMBL
BABH01012391    KZ149896    PZC78752.1    NWSH01001090    PCG72672.1    ODYU01006045    + More
SOQ47547.1    KQ460971    KPJ10127.1    AGBW02008141    OWR54124.1    RSAL01000076    RVE48853.1    GDQN01009905    JAT81149.1    KQ459590    KPI97185.1    KK853736    KDQ88522.1    GECZ01005668    JAS64101.1    GFDF01010731    JAV03353.1    GFDF01010727    JAV03357.1    PYGN01001345    PSN35517.1    GEDC01003480    JAS33818.1    GDIQ01073805    JAN20932.1    GDIQ01096993    JAL54733.1    GDIQ01182017    JAK69708.1    GDIP01228381    JAI95020.1    GDIP01031602    JAM72113.1    LRGB01000642    KZS17357.1    GDIP01157206    JAJ66196.1    GDIQ01009117    JAN85620.1    GDIP01208138    JAJ15264.1    GL732596    EFX72741.1    GDIP01080327    JAM23388.1    GDIP01192247    JAJ31155.1    QCYY01001677    ROT76254.1    GDIP01189891    JAJ33511.1    KQ971324    EFA01182.1    GEBQ01010486    JAT29491.1    GDIQ01149265    JAL02461.1    GDIQ01205756    JAK45969.1    GDIQ01158367    JAK93358.1    GDIQ01101307    JAL50419.1    GDIQ01062012    JAN32725.1    LJIJ01000186    ODN00790.1    GDIQ01248098    JAK03627.1    GDIQ01221083    JAK30642.1    GDIQ01116678    JAL35048.1    GDIQ01086911    JAN07826.1    PYGN01000001    PSN58506.1    GDIP01189890    GDIQ01126321    JAJ33512.1    JAL25405.1    GDIQ01237386    JAK14339.1    LNIX01000004    OXA55370.1    GDIP01047961    JAM55754.1    GEBQ01012804    JAT27173.1    GDIP01206486    GDIP01204485    GDIQ01048603    JAJ18917.1    JAN46134.1    GDIP01037116    JAM66599.1    GDIQ01158368    JAK93357.1    GDIP01132299    JAL71415.1    GDIQ01171526    JAK80199.1    NEVH01006565    PNF37924.1    GDIQ01207205    JAK44520.1    GDIQ01035574    JAN59163.1    GDIP01036016    JAM67699.1    KB201931    ESO93220.1    GDIP01208137    JAJ15265.1    GDIP01128376    JAL75338.1    GECZ01030952    JAS38817.1    GEDC01003843    JAS33455.1    JW868548    AFP01066.1    APGK01041384    KB740993    ENN76074.1    GEBQ01001351    JAT38626.1    BT126517    AEE61481.1    GEBQ01027663    JAT12314.1    GEDC01011318    JAS25980.1    GEDC01000943    JAS36355.1    NWSH01004502    PCG65040.1    AJWK01003658    KB632256    ERL90708.1    GALX01000423    JAB68043.1    ODYU01009447    SOQ53884.1    GEHC01001357    JAV46288.1    GDIP01066963    JAM36752.1    CH477495    EAT39972.1    AJVK01019112    KQ971371    EFA10235.2    CH477436    EAT40930.1    GDQN01000597    JAT90457.1    NEDP02001786    OWF52519.1    KQ459232    KPJ02800.1    AMQN01006444    KB298361    ELU09306.1    GEDC01028881    JAS08417.1    RQTK01000131    RUS86660.1    LJIG01016392    KRT80738.1    NIVC01002571    PAA56802.1    CP012528    ALC48151.1    NIVC01002439    PAA57872.1   
Pfam
PF00083   Sugar_tr        + More
PF01432   Peptidase_M3
PF01027   Bax1-I
PF02544   Steroid_dh
PF00001   7tm_1
Interpro
IPR005828   MFS_sugar_transport-like        + More
IPR001567   Pept_M3A_M3B       
IPR036259   MFS_trans_sf       
IPR024077   Neurolysin/TOP_dom2       
IPR020846   MFS_dom       
IPR006214   Bax_inhibitor_1-related       
IPR001104   3-oxo-5_a-steroid_4-DH_C       
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
SUPFAM
SSF103473   SSF103473       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.748467
 
 
Length:
423
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
38.4360200000001
Exp number, first 60 AAs:
38.31823
Total prob of N-in:
0.31917
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  21
inside
22  -  27
TMhelix
28  -  50
outside
51  -  423
 
 

Population Genetic Test Statistics

Pi
200.47025
Theta
152.837958
Tajima's D
1.051137
CLR
0.210789
CSRT
0.672266386680666
Interpretation
Uncertain
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