Gene

KWMTBOMO06436

Pre Gene Modal

BGIBMGA011605

Annotation

PREDICTED:_dyslexia_susceptibility_1_candidate_gene_1_protein_[Bombyx_mori]

Location

Bomo_Chr11(+):7094071-7096291      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.799

CDS

ATGCCGATAATTGTTAAAGATTTTACTTGGACGCAAACTGAAACTACAGTTCATATTAGGATCCCATTAAATCCGGGGAAACATGATAAAGTAGATTTGTTTACCACGGACTCTTACATAAAAGCGCATTTTAAACCATTTCTTTTCGAAGTCTTCCTACGATACGATGTTAACATAAGCAAAAGTAAATGTATTATTAATGACGACGAAATTACTTTGGATTTGTTAAAAAACAATGAAGAACAGTGGGATGGTCTAGAAAAGAATTTGAGTAAAGAAGAAAAAAAGGTTCTAAGGGATGAAGTTTATAAAAAGAGCCAAGAAAGGGCAAAAGAAGATGCGGAAAACAGATCTATTAAAAAAAGTCAATTAGACAGGTTTACAGTACAAAGAGCTATGGATTTAGATACAAAACAACATGCTCTGATGGATTCTAGAAGAGATCACGAGAGATATCAAGCTATGAATGCTTTGGAAGAGTGGAGACAACAGACAAACAAGAATGATTATGATGTAAATGAAAGCGGTGTTAAAATTACCGAAATGTCAGAGAATGAGCCTGTAAAAGTAAAAATAAGTACAGAAAAAGCACAATCAAAAGTGCGACCCCAAGCTACAACCCCAAGAACACCTCTGAAGACACCTGTGAAGTCGGAATTTGTAGAAAAAAAGAAGAAAGAAGCAGCAACTAGAGTTTTACCGAAATTGAGGCAAACCGCGCACTTGGAAATAACTCACACACCCAGATCATTTCCAACACCGAGCAGAGAATCCACAGCAGAGGAAGAGCAGACTTGGTTGAAGAACATCACCATGGCTCGTAGAGCTACGGGTTTCGTATCGGAAGACTTAAGGCCAGAGGAACAGGACCCTCAGTGGTGCAAAGAGAAGGGAGACGAATTCTTCCGCAACGGTAACTTTTTGGGAGCAATCAGTGCGTACACTCATGGCATAAAGTTGTCCGCGAAGTTGCCCAGTTTGTATTCGAACAGGGCTGCAACGCATTTCGCCCTCGGAAATTTTAATAAATGCGTAAACGACTGCTCCACAGCGTTAGACCTCCTGAAGCCGGCGTGTGAAGGGAACCGTAAGAGTCGAGCTAGATGCATCGCGAGAAGGGCCGCGGCTCTGGCCAGGCTCGGCTATCTGAACAAAGCCATTGAGGAAATGAAGGCGGCCAGTAGATTGATACCCGATGACCAAAAAATTAAGAAGGATATTTACGATATGGAAAGAGCTTGGGAACAAAATCCGGATTCCGATTGA

Protein

MPIIVKDFTWTQTETTVHIRIPLNPGKHDKVDLFTTDSYIKAHFKPFLFEVFLRYDVNISKSKCIINDDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTVQRAMDLDTKQHALMDSRRDHERYQAMNALEEWRQQTNKNDYDVNESGVKITEMSENEPVKVKISTEKAQSKVRPQATTPRTPLKTPVKSEFVEKKKKEAATRVLPKLRQTAHLEITHTPRSFPTPSRESTAEEEQTWLKNITMARRATGFVSEDLRPEEQDPQWCKEKGDEFFRNGNFLGAISAYTHGIKLSAKLPSLYSNRAATHFALGNFNKCVNDCSTALDLLKPACEGNRKSRARCIARRAAALARLGYLNKAIEEMKAASRLIPDDQKIKKDIYDMERAWEQNPDSD

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9JQ00   A0A2A4JKU1   A0A2H1W3K7   A0A2W1BUV2   A0A212FK71   A0A0N1I5N6   + More
A0A194PV34   A0A0L7LP28   A0A067QW13   A0A2J7QGW7   E0VVV3   A0A2J7QGW3   A0A2J7QGV7   D6WGD9   A0A1W4WMZ4   A0A088ARE7   J9K2Q1   A0A1B6KSX5   Q17PU2   A0A3B4D256   A0A1S3KVU8   A0A0R4ID80   U4UIY8   Q6P010   A0A1S3J8Z5   A0A3Q1HQX2   A0A182WSU2   Q4JS98   Q5VJR9   A0A3Q2E173   A0A3Q2FS64   N6TTB8   A0A0A9ZCE5   A0A182HLP5   A0A182T455   A0A182NRT0   A0A3N0XRH3   A0A146LYM9   A0A060XHA0   A0A182U9U0   A0A182RZJ9   A0A3Q3ETH5   A0A1L8H0M0   A0A182FPW1   Q5VJS2   A0A182VZM9   Q6AZN0   A0A3B3QDT1   V9KW27   A0A182JU76   W5UF71   K1PPK0   A0A2U9BZ66   A0A2J7QGW1   A0A3B1JIU1   A0A3S2PCT8   A0A182JL43   A0A3P8UEY9   A0A3Q3M7B4   A0A182V3L3   A0A182M6D7   A0A2I4CEL2   A0A336M803   A0A3Q3LSA0   A0A0B6ZTP8   A0A3Q1FNM6   W5N7K3   A0A1W4YUC3   A0A3Q2V976   A0A182LA39   A0A3S1A0H3   A0A3B3W076   Q5VJS3   A0A182GC27   A0A3Q2YED5   V4AZK8   A0A3P8Y624   A0A3P8QCM7   A0A1S3DD38   A0A3P9D7V5   A0A3P9Q5V5   A0A3Q1CM12   H2MHW7   I3K4E2   A0A3P8S1Z5   A0A3Q4GNL6   A0A3B4FHW3   A0A0P7XLH6   A0A3B5M1Z7   A0A3B3XZ68   H2YFR5   I3K4E1   A0A3B4FHX4   A0A3Q7S7Y6   A0A1B6I079   A0A3B4TBJ7   A0A087Y9P2   G3PM27   A0A315WX37   A0A3B4WSQ9  

Pubmed

19121390    28756777    22118469    26354079    26227816    24845553    + More
20566863    18362917    19820115    17510324    23594743    23537049    15944077    12364791    14747013    17210077    25401762    26823975    24755649    27762356    29240929    24402279    23127152    22992520    25329095    24487278    20966253    20431018    26483478    23254933    25069045    25186727    17554307    29703783   

EMBL

BABH01012392    NWSH01001090    PCG72667.1    ODYU01006045    SOQ47546.1    KZ149896    + More
PZC78749.1    AGBW02008141    OWR54122.1    KQ460971    KPJ10130.1    KQ459590    KPI97182.1    JTDY01000437    KOB77170.1    KK852879    KDR14473.1    NEVH01014359    PNF27820.1    DS235815    EEB17509.1    PNF27825.1    PNF27824.1    KQ971329    EFA01154.1    ABLF02005734    ABLF02005736    ABLF02005737    ABLF02005738    ABLF02028634    ABLF02028643    ABLF02063984    GEBQ01025476    JAT14501.1    CH477189    EAT48749.1    FO704795    KB632344    ERL93042.1    BC065881    BC165842    AY428510    AAH65881.1    AAI65842.1    AAR89528.1    CR954257    CAJ14164.1    AY428512    AAAB01008987    AAR89530.1    EAU75637.1    APGK01055167    KB741261    ENN71581.1    GBHO01002586    JAG41018.1    APCN01000909    RJVU01062584    ROJ29156.1    GDHC01006837    JAQ11792.1    FR905394    CDQ78998.1    CM004470    OCT89561.1    AY428509    AAR89527.1    BC077575    AAH77575.1    JW870735    AFP03253.1    JT414460    AHH40628.1    JH819193    EKC23538.1    CP026252    AWP08990.1    PNF27821.1    CM012442    RVE72169.1    AXCM01000025    AXCM01000026    UFQT01000524    SSX24973.1    HACG01024361    CEK71226.1    AHAT01024879    RQTK01000443    RUS79575.1    AAMC01125559    AAMC01125560    BC170925    BC170927    AY428508    AAI70925.1    AAR89526.1    JXUM01053620    JXUM01053621    JXUM01053622    KQ561784    KXJ77550.1    KB200701    ESP00556.1    AERX01031820    AERX01031821    JARO02001277    KPP75954.1    GECU01027378    JAS80328.1    AYCK01011943    NHOQ01000086    PWA33134.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000027135    UP000235965    UP000009046    UP000007266    UP000192223    UP000005203    UP000007819    UP000008820    UP000261440    UP000087266    UP000000437    UP000030742    UP000085678    UP000265040    UP000076407    UP000007062    UP000265020    UP000019118    UP000075840    UP000075901    UP000075884    UP000193380    UP000075902    UP000075900    UP000261660    UP000186698    UP000069272    UP000075920    UP000261540    UP000075881    UP000221080    UP000005408    UP000246464    UP000018467    UP000075880    UP000265120    UP000261640    UP000075903    UP000075883    UP000192220    UP000257200    UP000018468    UP000192224    UP000264840    UP000075882    UP000271974    UP000261500    UP000008143    UP000069940    UP000249989    UP000264820    UP000030746    UP000265140    UP000265100    UP000079169    UP000265160    UP000242638    UP000257160    UP000001038    UP000005207    UP000265080    UP000261580    UP000261460    UP000034805    UP000261380    UP000261480    UP000007875    UP000286640    UP000261420    UP000028760    UP000007635    UP000261360   

PRIDE

H9JQ00   

Pfam

PF04969   CS        + More
PF13181   TPR_8
PF07719   TPR_2
PF00153   Mito_carr
PF00515   TPR_1

Interpro

IPR011990   TPR-like_helical_dom_sf        + More
IPR007052   CS_dom       
IPR019734   TPR_repeat       
IPR008978   HSP20-like_chaperone       
IPR013026   TPR-contain_dom       
IPR037894   CS_DYX1C1       
IPR019786   Zinc_finger_PHD-type_CS       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR013105   TPR_2       
IPR023395   Mt_carrier_dom_sf       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR001440   TPR_1       

SUPFAM

SSF49764   SSF49764        + More
SSF48452   SSF48452       
SSF57903   SSF57903       
SSF103506   SSF103506       

Gene 3D

1.25.40.10     2.60.40.790     3.30.40.10     1.50.40.10    

CDD

cd06469  p23_DYX1C1_like

ProteinModelPortal

H9JQ00   A0A2A4JKU1   A0A2H1W3K7   A0A2W1BUV2   A0A212FK71   A0A0N1I5N6   + More
A0A194PV34   A0A0L7LP28   A0A067QW13   A0A2J7QGW7   E0VVV3   A0A2J7QGW3   A0A2J7QGV7   D6WGD9   A0A1W4WMZ4   A0A088ARE7   J9K2Q1   A0A1B6KSX5   Q17PU2   A0A3B4D256   A0A1S3KVU8   A0A0R4ID80   U4UIY8   Q6P010   A0A1S3J8Z5   A0A3Q1HQX2   A0A182WSU2   Q4JS98   Q5VJR9   A0A3Q2E173   A0A3Q2FS64   N6TTB8   A0A0A9ZCE5   A0A182HLP5   A0A182T455   A0A182NRT0   A0A3N0XRH3   A0A146LYM9   A0A060XHA0   A0A182U9U0   A0A182RZJ9   A0A3Q3ETH5   A0A1L8H0M0   A0A182FPW1   Q5VJS2   A0A182VZM9   Q6AZN0   A0A3B3QDT1   V9KW27   A0A182JU76   W5UF71   K1PPK0   A0A2U9BZ66   A0A2J7QGW1   A0A3B1JIU1   A0A3S2PCT8   A0A182JL43   A0A3P8UEY9   A0A3Q3M7B4   A0A182V3L3   A0A182M6D7   A0A2I4CEL2   A0A336M803   A0A3Q3LSA0   A0A0B6ZTP8   A0A3Q1FNM6   W5N7K3   A0A1W4YUC3   A0A3Q2V976   A0A182LA39   A0A3S1A0H3   A0A3B3W076   Q5VJS3   A0A182GC27   A0A3Q2YED5   V4AZK8   A0A3P8Y624   A0A3P8QCM7   A0A1S3DD38   A0A3P9D7V5   A0A3P9Q5V5   A0A3Q1CM12   H2MHW7   I3K4E2   A0A3P8S1Z5   A0A3Q4GNL6   A0A3B4FHW3   A0A0P7XLH6   A0A3B5M1Z7   A0A3B3XZ68   H2YFR5   I3K4E1   A0A3B4FHX4   A0A3Q7S7Y6   A0A1B6I079   A0A3B4TBJ7   A0A087Y9P2   G3PM27   A0A315WX37   A0A3B4WSQ9  

PDB

2LNI     E-value=0.000261702,     Score=105

KEGG

101744191    K19758 dyslexia susceptibility 1 candidate gene 1 protein | (RefSeq) dyslexia susceptibility 1 candi

GO

GO:0003341   GO:0005813   GO:0097730   GO:0036158   GO:0036159   GO:0070986   GO:0060271   GO:0060287   GO:0003351   GO:0007507   GO:0030331   GO:0007368   GO:0046872   GO:0016021   GO:0022857   GO:0005515   GO:0009056   GO:0016788   GO:0005524   GO:0003676   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

Length:

421

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00282

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.00407

outside

1  -  421

 

 

Pi

30.532958

Theta

24.96846

Tajima's D

0.221936

CLR

10.81058

CSRT

0.43602819859007

Interpretation

Uncertain