Gene

KWMTBOMO06434  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011604

Annotation

PREDICTED:_zinc_finger_CCCH_domain-containing_protein_15_homolog_[Plutella_xylostella]

Location

Bomo_Chr11(+):7079491-7085312      View in EpiBrowser

Full name

Zinc finger CCCH domain-containing protein 15 homolog      

Location in the cell

Nuclear   Reliability : 3.144

CDS

ATGCCGCCCAAAAAGCCCAGTGGAGCCAGTAAGAAAACAGAGCAAAAAAAGAAGGAGAAAGTTATTGAGGACAAAACATTTGGCTTGAAGAATAAGAAAGGTGCTAAACAGCAAAAGTTCATTCAACAAGTTGAAAAACAAGTGAAGAGCGGTGGAGTACATCCAGTCAAACCTGTTGAGGACAAGAAAAAGGAAAAAGAACAAAAACTCAAAGAGCAGAAGGAGTTGGCGGCACTGTTCAAACCTGTCCAAACTCAGAAAGTTGAGAAAGGTACTGATCCTAAGTCAGTTGTTTGTGCGTTCTTCAAACAAGGACAATGTGCGAAGGGTGATAGATGCAAGTTTTCTCATGATTTGACAATTGAAAGAAAGGCAGAAAAACGTTCATTGTATGTGGACATGCGTGATGATGATGACAATATGGATAACTGGGATGAGGATAAGCTTAAAGAAGTGGTGGAAAAGAAACATGGTGAAGGCGATAAGCAGAGACCCACCACTGATATTATCTGCAAACATTTCCTTGAGGCAGTTGAGAGATCAAAATATGGTTGGTTCTGGGAATGTCCGTCAGGTTTGAAGTGTATATACAGGCATGCCTTACCTGCTGGTTTTGTATTGAAGAGGGATAAGAAAAAAATGGAAGAAAAGAAGAACGAAATATCTCTTGTCGATTTAATAGAGAGGGAACGAGCAGCATTAGGACCTAATCAAACCAAAATCACCTTGGAAACGTTCTTGGCATGGAAGAAGAAGAAAATCAGAGAGAAACAGGAGGCAATGAACCAGGCTGAAGAGCAGCGTCGCAGCGACTACAAGGCGGGTCGCGCCGTCGGCCTGTCGGGACGGGAGATGTTCTCCTTCGACCCCACGCTGGCCGCCGACGAGGACGCCGAGGACGGAGACGAGGCCGTCGACCTCAGGACCTATGATGAGGAGGAGCTCGACAACACGCAGTACAGGGAGGTGCAGCTCGATCTCATCGGGATGGAGGCCTCCGAGGTGGACGATTCCGGTACTAAAGCGACTGAAGATCGCTTGCAGCGCTTCGGAGATGAACTTTCACCTGTGGCAGCGGAAGCCGGCGCCGCGCCCATTAACGAGAACCTGTTCCTTGACGAGGACCTGGATGAAGAGCTGCAGAACCTTGACCTGGAAGACTAG

Protein

MPPKKPSGASKKTEQKKKEKVIEDKTFGLKNKKGAKQQKFIQQVEKQVKSGGVHPVKPVEDKKKEKEQKLKEQKELAALFKPVQTQKVEKGTDPKSVVCAFFKQGQCAKGDRCKFSHDLTIERKAEKRSLYVDMRDDDDNMDNWDEDKLKEVVEKKHGEGDKQRPTTDIICKHFLEAVERSKYGWFWECPSGLKCIYRHALPAGFVLKRDKKKMEEKKNEISLVDLIERERAALGPNQTKITLETFLAWKKKKIREKQEAMNQAEEQRRSDYKAGRAVGLSGREMFSFDPTLAADEDAEDGDEAVDLRTYDEEELDNTQYREVQLDLIGMEASEVDDSGTKATEDRLQRFGDELSPVAAEAGAAPINENLFLDEDLDEELQNLDLED

Similarity

Belongs to the ZC3H15/TMA46 family.

Keywords

Coiled coil   Complete proteome   Metal-binding   Phosphoprotein   Reference proteome   Repeat   Zinc   Zinc-finger  

Feature

chain  Zinc finger CCCH domain-containing protein 15 homolog

Uniprot

H9JPZ9   A0A2W1BZQ7   A0A194Q1A6   A0A0N1PIF1   A0A2A4JKR1   A0A1E1W3V5   + More
A0A2H1WI04   S4PL48   A0A212FK99   A0A151X1S7   D6WE79   A0A151INJ7   J3JTV1   A0A195B460   A0A158NFY8   A0A1Y1LWW3   F4WZD2   A0A195E5S3   A0A195EU55   A0A1Q3FW82   A0A0K8TQX0   E2A735   A0A1Q3G1C2   B4LNB2   A0A0M8ZV23   A0A1A9W7S4   A0A0L0CM64   A0A2S2Q5M9   A0A1A9VVK8   D3TNC8   A0A088AQQ1   B4KMY7   A0A2A3ELB6   A0A1I8P0T8   A0A0L7RER2   A0A0M4EHE1   A0A1A9Z5F1   A0A1B0C075   A0A1B0FND0   A0A2S2NG70   J9JRR0   A0A0K8W5N8   A0A034VEJ2   A0A182M7S3   A0A084VWA2   A0A2J7Q726   A0A182MZ86   A0A2J7Q718   W5J4Y6   A0A2M4BPF7   A0A1B6E755   A0A182RK57   A0A2M4BPE5   A0A2M4BPQ0   A0A182P492   A0A182YN66   U5EWW1   T1PB94   B4J777   A0A182TWY9   A0A067QKS0   W8BKN6   Q7PPM8   A0A1S4GYT9   A0A182KN62   A0A182IBK0   A0A182JX65   A0A2R7VTS7   A0A182UWF8   A0A0A1XQD9   A0A0A9YNK2   A0A182X5W7   B4HS05   A0A1A9X7A9   A0A182Q7X0   A0A0J9R9E5   B4P3A4   A0A182F3C7   B3N8L7   A0A0B4LEV3   Q7JWR9   A0A1B6I725   A0A336LMX8   A0A2M4AEG1   T1EAW1   B3MFV4   A0A2M3Z4G3   A0A182H624   A0A023EQP7   A0A1B6KGY2   B4MPM6   A0A1L8DD66   A0A3B0J4B4   A0A1W4UY45   B4GCS9   Q28Y69   A0A182IR62   A0A0P6J3X4   A0A023F9J1   E0VYX4  

Pubmed

19121390    28756777    26354079    23622113    22118469    18362917    + More
19820115    22516182    23537049    21347285    28004739    21719571    26369729    20798317    17994087    26108605    20353571    25348373    24438588    20920257    23761445    25244985    25315136    24845553    24495485    12364791    20966253    25830018    25401762    26823975    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    15676025    18327897    26483478    24945155    15632085    26999592    25474469    20566863   

EMBL

BABH01012394    BABH01012395    KZ149896    PZC78747.1    KQ459590    KPI97180.1    + More
KQ460971    KPJ10132.1    NWSH01001090    PCG72665.1    GDQN01009386    JAT81668.1    ODYU01008710    SOQ52522.1    GAIX01004225    JAA88335.1    AGBW02008141    OWR54120.1    KQ982585    KYQ54328.1    KQ971325    EEZ99462.1    KQ976932    KYN07036.1    APGK01043981    BT126660    KB741019    KB631645    AEE61623.1    ENN75158.1    ERL84977.1    KQ976625    KYM79060.1    ADTU01001539    GEZM01045904    JAV77631.1    GL888479    EGI60376.1    KQ979609    KYN20199.1    KQ981979    KYN31437.1    GFDL01003208    JAV31837.1    GDAI01001060    JAI16543.1    GL437252    EFN70767.1    GFDL01001455    JAV33590.1    CH940648    EDW61064.1    KQ435875    KOX70203.1    JRES01000195    KNC33438.1    GGMS01003707    MBY72910.1    EZ422930    ADD19206.1    CH933808    EDW09909.1    KZ288227    PBC31821.1    KQ414611    KOC69226.1    CP012524    ALC41960.1    JXJN01023488    CCAG010006790    GGMR01003510    MBY16129.1    ABLF02033601    ABLF02033604    ABLF02041872    GDHF01005955    JAI46359.1    GAKP01018420    JAC40532.1    AXCM01002194    ATLV01017545    KE525174    KFB42246.1    NEVH01017447    PNF24383.1    PNF24382.1    ADMH02002200    ETN57854.1    GGFJ01005818    MBW54959.1    GEDC01003528    JAS33770.1    GGFJ01005819    MBW54960.1    GGFJ01005802    MBW54943.1    GANO01000373    JAB59498.1    KA645959    AFP60588.1    CH916367    EDW02095.1    KK853239    KDR09514.1    GAMC01007228    JAB99327.1    AAAB01008944    EAA10155.5    APCN01000708    KK854085    PTY10932.1    GBXI01001120    JAD13172.1    GBHO01009800    GBRD01008077    GDHC01021044    JAG33804.1    JAG57744.1    JAP97584.1    CH480816    EDW46968.1    AXCN02002069    CM002911    KMY92294.1    CM000157    EDW89377.1    CH954177    EDV59494.1    AE013599    AHN56000.1    AY060945    AY113336    GECU01024982    JAS82724.1    UFQS01000065    UFQT01000065    SSW98914.1    SSX19300.1    GGFK01005848    MBW39169.1    GAMD01000052    JAB01539.1    CH902619    EDV35636.1    GGFM01002661    MBW23412.1    JXUM01004990    KQ560185    KXJ83943.1    GAPW01001666    JAC11932.1    GEBQ01029274    JAT10703.1    CH963849    EDW74065.1    GFDF01009678    JAV04406.1    OUUW01000001    SPP74303.1    CH479181    EDW32492.1    CM000071    GDUN01001121    JAN94798.1    GBBI01001043    JAC17669.1    DS235848    EEB18580.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000075809    + More
UP000007266    UP000078542    UP000019118    UP000030742    UP000078540    UP000005205    UP000007755    UP000078492    UP000078541    UP000000311    UP000008792    UP000053105    UP000091820    UP000037069    UP000078200    UP000005203    UP000009192    UP000242457    UP000095300    UP000053825    UP000092553    UP000092445    UP000092460    UP000092444    UP000007819    UP000075883    UP000030765    UP000235965    UP000075884    UP000000673    UP000075900    UP000075885    UP000076408    UP000095301    UP000001070    UP000075902    UP000027135    UP000007062    UP000075882    UP000075840    UP000075881    UP000075903    UP000076407    UP000001292    UP000092443    UP000075886    UP000002282    UP000069272    UP000008711    UP000000803    UP000007801    UP000069940    UP000249989    UP000007798    UP000268350    UP000192221    UP000008744    UP000001819    UP000075880    UP000009046   

PRIDE

H9JPZ9    Q7JWR9   

Pfam

PF16543   DFRP_C        + More
PF00642   zf-CCCH
PF16131   Torus
PF18044   zf-CCCH_4

Interpro

IPR032378   ZC3H15/TMA46_C        + More
IPR036855   Znf_CCCH_sf       
IPR000571   Znf_CCCH       
IPR032297   Torus       
IPR041367   Znf-CCCH_4       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF90229   SSF90229       

ProteinModelPortal

H9JPZ9   A0A2W1BZQ7   A0A194Q1A6   A0A0N1PIF1   A0A2A4JKR1   A0A1E1W3V5   + More
A0A2H1WI04   S4PL48   A0A212FK99   A0A151X1S7   D6WE79   A0A151INJ7   J3JTV1   A0A195B460   A0A158NFY8   A0A1Y1LWW3   F4WZD2   A0A195E5S3   A0A195EU55   A0A1Q3FW82   A0A0K8TQX0   E2A735   A0A1Q3G1C2   B4LNB2   A0A0M8ZV23   A0A1A9W7S4   A0A0L0CM64   A0A2S2Q5M9   A0A1A9VVK8   D3TNC8   A0A088AQQ1   B4KMY7   A0A2A3ELB6   A0A1I8P0T8   A0A0L7RER2   A0A0M4EHE1   A0A1A9Z5F1   A0A1B0C075   A0A1B0FND0   A0A2S2NG70   J9JRR0   A0A0K8W5N8   A0A034VEJ2   A0A182M7S3   A0A084VWA2   A0A2J7Q726   A0A182MZ86   A0A2J7Q718   W5J4Y6   A0A2M4BPF7   A0A1B6E755   A0A182RK57   A0A2M4BPE5   A0A2M4BPQ0   A0A182P492   A0A182YN66   U5EWW1   T1PB94   B4J777   A0A182TWY9   A0A067QKS0   W8BKN6   Q7PPM8   A0A1S4GYT9   A0A182KN62   A0A182IBK0   A0A182JX65   A0A2R7VTS7   A0A182UWF8   A0A0A1XQD9   A0A0A9YNK2   A0A182X5W7   B4HS05   A0A1A9X7A9   A0A182Q7X0   A0A0J9R9E5   B4P3A4   A0A182F3C7   B3N8L7   A0A0B4LEV3   Q7JWR9   A0A1B6I725   A0A336LMX8   A0A2M4AEG1   T1EAW1   B3MFV4   A0A2M3Z4G3   A0A182H624   A0A023EQP7   A0A1B6KGY2   B4MPM6   A0A1L8DD66   A0A3B0J4B4   A0A1W4UY45   B4GCS9   Q28Y69   A0A182IR62   A0A0P6J3X4   A0A023F9J1   E0VYX4  

KEGG

101744478    no KO assigned | (RefSeq) zinc finger CCCH domain-containing protein 15 homolog

GO

GO:0046872   GO:0005829   GO:0002181   GO:0016307   GO:0046488   GO:0005524   GO:0003676   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

Length:

387

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00064

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00353

outside

1  -  387

 

 

Pi

287.670801

Theta

219.135106

Tajima's D

1.149144

CLR

0.090382

CSRT

0.701714914254287

Interpretation

Uncertain