SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06431
Pre Gene Modal
BGIBMGA011603
Annotation
PREDICTED:_1-phosphatidylinositol_3-phosphate_5-kinase-like_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr11(+):6984951-7020375      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.508
 

Sequence

CDS
ATGGATAAATACGACACGTCTCAGCTAACTGAATTTCCTCGATTTGAGCCCGAATCCACCCAGAGTGGTGTGTCAACGTTTTTCAATAAACTATTAAAGTTTCCGATATTCTCGCCTAGTGAGGCTAGTGAAGTGCCCCAAGATAAAAATGCTGCTGATAATAGAGATTTAACCGCGTCTGCAGAACAAATTAAACATGAATATGACGATAATAAGGCGGAAACTGGGTCATATGCTCTCGAGTTGGAGGGGCGTAGTCTTCCTAATGTGTTGAGAAGAATAACAAGTTTAGTAGCCCTGGGATCTGGTAACGGCACAAGATATGCAGACACTGAACTAGCCCGATACTGGATGCCAGATGATATTTCTCGTGAATGCTATGAGTGTGCAACCAGATTCAGTGCTTTGAGAAGACGCCACCATTGCAGAGTCTGTGGACAGATCTTTTGCTCCAGGTGCTGCAGTCAAAGAGTTCCAGGCCATATATTCGGATGTGCTGGTGGTCTCCGAGTTTGTAACTACTGTTGTAACGTTGTGCTCAGCTATTTGAAAGAGAATGATCTCACTGGAGATATATCACCTGATTTGAGAACACTGCAGGAAAATCTGCAGATGAAGTTCCCAGAACACAAAGGGCAGCAGTTGAACAAGACCCGTGAACATTTCATGTTCTCTCACGAGCAGGAGGAACGTACGGAACCACGTACAACTCAGAAGGAGTCCTTGCATGATATATTCAGGCAATTATCTTTTACGTTGCCTACACAACAACATCGATATCGATTAGTACGCTACAACGGAGTGTGGCGCGGATGCGACATAATGCAATGGATTATGGACAACACCAGTAATAAAACGAGAGCCCAGGCGACGAGCGTGTGCCAGGCGCTGCTGAGTGCGGGCTACGTGCAGGGCGCGACTCCCGACCCTCACTTTGCAGACTACGCGCTGTACCGGCCGCTGGCCGAACTACCGACCCTCGCCCACGACCAGCCCCCGGCTGAAGAATGCACTCGAATCGTTGAGAGCGTGTCGTCTTACTGCCTGGATCTAAATCTAGACGACAGCTCGGCCCGGCTCATCAAAACAAATAAAGCAGAACAACGGGCGCCTTCTTCGAGCGAAGACGAAACTCCAGCTGTTGAACACAATGAAGAGTACAATGAATCGAGTAACGTATGTCGCGCGATTTGGTGCTCCGGCGAGGAACACCTCCGACTGCTGCTGCGGCAGTGCGCGGCGCGGCGCGGCCTCTCCGCGGCCTGGCTGCACGTGCTGCTGCCCCTGTGCCAACGAGCCGCCGACCTCATCAATTTAGATGTCCACGCGACCGATATTGACGTGCGAAATTACGTTCAAGTTAAAAAAGTCCCCGGCGGTACAATACAGGATAGTTGCGTCATCCATGGCGTTGTCATGACGAAGAATGTTGCGCTCAGAGGCATGCCCCGGCAAATGTCTAACCCTTCGATACTGCTACTGGACTGCTCTATCGCATATCAGAGGGTTGAAGGGAAGCTGACCACATTAGAACCGGTGCTGTTGCAAGAGAGCGAGTATCTGTCGCGGTGCGCGGCGCGCGTTGTGGCGCTGGGCGCGGGCGTGGTGCTGAGCCGCGGCTCGGTGTCGCGCGGCGTGCAGGAGGCGCTGCGGGCGGCGGGGCTGGCCGTGGCGGGCTCGCTGCGCCCCTCCGCGCTGCGCCGCGCCGCCCGGGCCGCGCGCGCCGACGTGCTCGCCTCCATCGACGCCAGGATCGGCACCCCGCGCCTCGGGACCTGCCACAACTTTTACGTCAAAAATTATTCCGGAAAAACCCTGATGGTGCTCGAGGGATGCGCCGAGCCGAACCTGGGCTGCTGCATACTGTTGCGGGGCGCTTCCGTTCAAGAACTTATCCGCGTCAAAAAAGTGGTAAAGTTCATGCTCCTGGCGTGCTACAACTGGAAACTGGAGAGGGCCTTCCTCGGAGACATAGAGGCCGTACTACCCGAGCCCGGCATGACCTTCGACGACGACAAGGACAACGTCGAGGGCCACGCCGGGGCGGGCGAGGACCGGGAGTCGAAGGGTCAAAGCGAGGCCGACATCTTCGACTTGAACAACATGAACAAAGTCATGGAGTCCGTGTCCCATCTCAAAGCGGACGTCAGAACGAACGGAGACCTCGCCGACGACGAGGCGTCAAACGGGAGTCCGAACAGCGACTCGAACAACGACGACCTGTTCTCTTGCACGAACAAAACTAGCTCGGACCGCAAGCCGACGGCTGGCGACGCGCGTCAGCCGGCTGACGACCCGCTGCAGCAGCCGAGGCAGGCGCGGAAGGCCGACAGCGACAAGAACCCCAGCTGCGGCGTGCCTATCCGAGACTTCAGCGACCCGCTCAGGGCCACGCTGTCGGCGGACGACGACGTGTTCCTGCCCCGCGAGGAGCAGCTCAAGGCAGACTCGCACACCGACAGATGGTCGACTGATGACGTGGTCCTGTCGATGTCTCCCAACATGGTCATACCAGCCCCGTACGAGGAGACGGAGGCCGGTCGCCGCAGCAAGGTCAGGATGTACTTCCCTCCGCCCCCACGCGCGTGCCGCCCCTCCCGCGCGCCCGCCACTCCGCGTCCCGCGCACAGGGACGTCGCTGCCGCTCCGCTCACGCCGGTTGTCAAGGAAGCCCACCCGTTTATCCGGGAAGCTATAAGGTCGACCGTAGACGACCCCGCGGTAAGGAGGAGCCTGGCTCACTACCGTGCCACGGGTGGCCGCCTCGCCTCGAACGGACACCACTCCTCGTGTCCGCTGCGTCGGCCGTCCGTGGTCAAGGAGCCGCCCCGGGAGCCCGAGCCGGACGGGAAGCAGGCGGAGGACGACGCGCACGACCCCTTCGCCCCCGAGAACCACCAGCGGCTGAGCCTGCTGCTGTACAGCTACAGCAACAAGTCCGCGAACGTGCCGGACTTCTGTGTGAACCCTTGGATAGTGACGATGGAAATGTATGGGCGACACGACATATCATTGGGCGCCTTCCTCGACAAGTATTGCTTCAACGGGGACTACAAGTGCACCTCCAACACTTGTCAAGTGCCCATGAACCAGCACGTCAGGAGGTTCGTCCACGGCGACGTGTGCATCACCATCACCTGCAACACCATCGGACACAGCAACGTGGACAAGGCGCGGCCGCAACACGCCAAGCAGGTGATGTTCTGGTCGCGCTGCGAGCGCTGCGGGTGCGCGGGCGCGGCGCGGCGGCTGTCGGCTCGCGCGGCGTGCGTGTCGCTGGCGGGCTACGTGCGCGCTCGCAGCCTGTGCCCGCGCTACGTGCGCGCGCGGACGTGCCCGCACCCGCTGCACGCGCACGCGCACGCCTTCGTCAGCAACCTCACCACGGCGTACTTCAGGTTCAGCAAAATAACGGCGTACGACATCCAACTACCCCCTGAAGAGATTTCAATCAACTACGACGTCAAACAAATGAGGGAAGATCTCATAATTCAACTGAACGAACTCATGCTTAAAGGTCACGAGACGTTCAGTAGCATCTCCGACCCTGAAGCGGATAAGGAGTTCCAGGCCTTCAAGCAACACACCGATCAGATACATCTGGCGTTGACGTCGTCCAGCATCCACGAGACGGACTCGCTGAGGGATGCCGTCCGCCGGCTGTGGAGTGTGTCCGATTCGATTATCTTTGGCGAGAAGATGCTGCGCGACGCCCAGGACAAGTGGTCCACTCCCGGAAAGAACACGAAGCCCGTACAGGAGACTGCTGCTGAAGATAAATCTGATGTCGAAGATTCGTCCGGCGATAACGGCACCACGTATGTGTTTTCCACAGACAACTCGAGCCGGGAGCTGGACAAGGAGCACGGCGGTGGCGACGAGGACGAGGAGCGCGGCGACAAGAAGACGGCGCGGCAGATTCTGTCGCAGCTGCTGTCCAACAATCAGCCCGCCAGCCATAGTGGCGTGGTGGTGAACGGCGTGCTGCCGGTGGTATTGGCGGGCGCGCTGGGCCCTCTGCTGGCCGCCGCGCTCGCCTCCGCCGCCTACCGCCGCGCCCGCCAGCGTCACGGCGCGCCATCCGAGCCAGAGGAGTCAGAGTCCGTGGCCCGGGATAAAAGTGACGGTCAGAAGTCTAAAGAAAAATCAGTTGAACACATCGAAGTTGTTCTAAAGGAGGGCCTGACGTGCCGCGTGTACTTCGCGCGGCAGTTCGAGCAGCTGCGCCACGCCGTGCTGGCCCCGCCCCCCGCGGCCCCCGCAGCCCCCGTGCCGCCCCGCGCCGCGCCCTGTTCCTGCGACGACAAAAACGTATGCGACATTGAGGAGTCGTTCATACGGTCGATGGCTCAGTGCGTGCCGTGGGCGGCGCGCGGGGGCAAGTCCGGCTCGACCTTCTGCAAGACTAAAGACGACCGGTTCGTGCTGAAGGAGATGACGAAGCCCGAGTCGCAGCAGTTCCTGGACTTCGCCCCCCACTACTTCAGCTACGTGGCCGCGTGCCGGGAGGAGCGCCAGCCCAGCCTGCTAGCGCGTATAGTGGGGGTGTTCAGCGCGTGCGGCGCGGACGTGCTGGTGCTGGAGCACGTGTGGTACGGCTGCGGCCCCGGGGCGCCACGCTACGACCTCAAGGGCTCCTCGCGACACCGCCTGGCGCCGCAGCCCGCGCGGCCCCCGCCGCAGCATGTACTCATGGACGAGAACTTGCTCAACTCGCGCTGGGAGCGGCCGCTGTACGTGCAGTCCGCGAGCGGCGCCGCGCTGTGGCGGGCCGTGCGCCGCGACACCGCCCTGCTGGCGCGGCTCGGCGTCATGGACTACTCGCTGCTGCTCGCCGTGCAGGACGACACGCTGCTGCTGGGCATCATCGACTACATCCGCACGTTCACATGGGACAAGAAGCTGGAGCACCTGGTGAAGAAGAACCTGGGCTCAGGCCAGCCGACCGTGGTGTCCCCGGACCAGTACCGGAGCCGGTTCTGCGCGGCCGCCAGGAAGTACTTCCTGCACGTTCCCCAGCACTGGGACGTCATACGCACCCAGAACACGGATACGTAA
Protein
MDKYDTSQLTEFPRFEPESTQSGVSTFFNKLLKFPIFSPSEASEVPQDKNAADNRDLTASAEQIKHEYDDNKAETGSYALELEGRSLPNVLRRITSLVALGSGNGTRYADTELARYWMPDDISRECYECATRFSALRRRHHCRVCGQIFCSRCCSQRVPGHIFGCAGGLRVCNYCCNVVLSYLKENDLTGDISPDLRTLQENLQMKFPEHKGQQLNKTREHFMFSHEQEERTEPRTTQKESLHDIFRQLSFTLPTQQHRYRLVRYNGVWRGCDIMQWIMDNTSNKTRAQATSVCQALLSAGYVQGATPDPHFADYALYRPLAELPTLAHDQPPAEECTRIVESVSSYCLDLNLDDSSARLIKTNKAEQRAPSSSEDETPAVEHNEEYNESSNVCRAIWCSGEEHLRLLLRQCAARRGLSAAWLHVLLPLCQRAADLINLDVHATDIDVRNYVQVKKVPGGTIQDSCVIHGVVMTKNVALRGMPRQMSNPSILLLDCSIAYQRVEGKLTTLEPVLLQESEYLSRCAARVVALGAGVVLSRGSVSRGVQEALRAAGLAVAGSLRPSALRRAARAARADVLASIDARIGTPRLGTCHNFYVKNYSGKTLMVLEGCAEPNLGCCILLRGASVQELIRVKKVVKFMLLACYNWKLERAFLGDIEAVLPEPGMTFDDDKDNVEGHAGAGEDRESKGQSEADIFDLNNMNKVMESVSHLKADVRTNGDLADDEASNGSPNSDSNNDDLFSCTNKTSSDRKPTAGDARQPADDPLQQPRQARKADSDKNPSCGVPIRDFSDPLRATLSADDDVFLPREEQLKADSHTDRWSTDDVVLSMSPNMVIPAPYEETEAGRRSKVRMYFPPPPRACRPSRAPATPRPAHRDVAAAPLTPVVKEAHPFIREAIRSTVDDPAVRRSLAHYRATGGRLASNGHHSSCPLRRPSVVKEPPREPEPDGKQAEDDAHDPFAPENHQRLSLLLYSYSNKSANVPDFCVNPWIVTMEMYGRHDISLGAFLDKYCFNGDYKCTSNTCQVPMNQHVRRFVHGDVCITITCNTIGHSNVDKARPQHAKQVMFWSRCERCGCAGAARRLSARAACVSLAGYVRARSLCPRYVRARTCPHPLHAHAHAFVSNLTTAYFRFSKITAYDIQLPPEEISINYDVKQMREDLIIQLNELMLKGHETFSSISDPEADKEFQAFKQHTDQIHLALTSSSIHETDSLRDAVRRLWSVSDSIIFGEKMLRDAQDKWSTPGKNTKPVQETAAEDKSDVEDSSGDNGTTYVFSTDNSSRELDKEHGGGDEDEERGDKKTARQILSQLLSNNQPASHSGVVVNGVLPVVLAGALGPLLAAALASAAYRRARQRHGAPSEPEESESVARDKSDGQKSKEKSVEHIEVVLKEGLTCRVYFARQFEQLRHAVLAPPPAAPAAPVPPRAAPCSCDDKNVCDIEESFIRSMAQCVPWAARGGKSGSTFCKTKDDRFVLKEMTKPESQQFLDFAPHYFSYVAACREERQPSLLARIVGVFSACGADVLVLEHVWYGCGPGAPRYDLKGSSRHRLAPQPARPPPQHVLMDENLLNSRWERPLYVQSASGAALWRAVRRDTALLARLGVMDYSLLLAVQDDTLLLGIIDYIRTFTWDKKLEHLVKKNLGSGQPTVVSPDQYRSRFCAAARKYFLHVPQHWDVIRTQNTDT

Summary

Uniprot
A0A3S2NXZ3   A0A194PV29   A0A212FK35   A0A2W1C3K6   A0A2H1V717   A0A1Y1N439   + More
A0A1Y1N0Y2   A0A0N0U2V0   A0A151I583   A0A151IBT4   N6U4T5   A0A3Q0J738   E9GNB7   Q16QI2   A0A0L0CB97   A0A0P6IWA2   T1P9T6   A0A1I8M7W2  
Pubmed
26354079    22118469    28756777    28004739    23537049    21292972    + More
17510324    26108605    26999592    25315136   
EMBL
RSAL01000104    RVE47400.1    KQ459590    KPI97177.1    AGBW02008141    OWR54117.1    + More
KZ149896    PZC78743.1    ODYU01001010    SOQ36628.1    GEZM01018357    JAV90317.1    GEZM01018359    JAV90315.1    KQ435955    KOX68078.1    KQ976431    KYM87614.1    KQ978078    KYM97169.1    APGK01042726    APGK01042727    APGK01042728    KB741007    ENN75641.1    GL732554    EFX79002.1    CH477747    EAT36658.1    JRES01000641    KNC29688.1    GDUN01000688    JAN95231.1    KA645459    AFP60088.1   
Proteomes
UP000283053    UP000053268    UP000007151    UP000053105    UP000078540    UP000078542    + More
UP000019118    UP000079169    UP000000305    UP000008820    UP000037069    UP000095301   
Pfam
PF00610   DEP        + More
PF01504   PIP5K
PF01363   FYVE
PF00118   Cpn60_TCP1
Interpro
IPR000306   Znf_FYVE        + More
IPR000591   DEP_dom       
IPR027409   GroEL-like_apical_dom_sf       
IPR002423   Cpn60/TCP-1       
IPR027484   PInositol-4-P-5-kinase_N       
IPR017455   Znf_FYVE-rel       
IPR013083   Znf_RING/FYVE/PHD       
IPR036388   WH-like_DNA-bd_sf       
IPR002498   PInositol-4-P-5-kinase_core       
IPR011011   Znf_FYVE_PHD       
IPR036390   WH_DNA-bd_sf       
IPR027410   TCP-1-like_intermed_sf       
SUPFAM
SSF52029   SSF52029        + More
SSF57903   SSF57903       
SSF46785   SSF46785       
SSF54849   SSF54849       
Gene 3D
1.10.10.10     3.30.40.10     3.30.800.10     3.50.7.10    
ProteinModelPortal
A0A3S2NXZ3   A0A194PV29   A0A212FK35   A0A2W1C3K6   A0A2H1V717   A0A1Y1N439   + More
A0A1Y1N0Y2   A0A0N0U2V0   A0A151I583   A0A151IBT4   N6U4T5   A0A3Q0J738   E9GNB7   Q16QI2   A0A0L0CB97   A0A0P6IWA2   T1P9T6   A0A1I8M7W2  
PDB
3IYG     E-value=2.40535e-10,     Score=163

Ontologies

KEGG
101744623    K00921 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150] | (RefSeq) putative 1-phosphatidyl
PATHWAY
00562    Inositol phosphate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04070    Phosphatidylinositol signaling system - Bombyx mori (domestic silkworm)
04145    Phagosome - Bombyx mori (domestic silkworm)
GO
GO:0046872   GO:0016307   GO:0005524   GO:0035556   GO:0016021   GO:0000285   GO:0046854   GO:0010008   GO:0046488   GO:0003676   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

Topology

Length:
1685
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.99498999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00067
outside
1  -  1685
 
 

Population Genetic Test Statistics

Pi
252.924351
Theta
185.542277
Tajima's D
1.068713
CLR
0.328099
CSRT
0.679966001699915
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号