SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06430  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011884
Annotation
hypothetical_protein_KGM_01834_[Danaus_plexippus]
Full name
ER membrane protein complex subunit 8/9 homolog      
Location in the cell
Cytoplasmic   Reliability : 3.019
 

Sequence

CDS
ATGAGTGAAGTATCAATTGAAACCGGAGCCTACGCTAAAATAATATTGCACGCCGCTAAGTATCCACACTGTGCTGTGAATGGTGTGCTTCTTGCTGATGCCGGAAAGACTAAGGAAGGTGGCAGGAACCAAAGTTTAGATATCGTTGATGCTATACCACTATTCCACCACAGCCATTACGTCTCACCAATGGCCGAAGTAGCACTCACACAGATTGAAACCATAGCTCAATCAGAAAACTGTGTGATAGCTGGTTACTATGCAGCCTGCGAGAACTTCCGTGATAATATTGTTGAAAGATGTCCAGGGTTGAAGATAGCTGAAAAGATTGTTGAGTATTTCCCTTCTGCTGTGTTCATTGTGGTGGATAACAAAAAAATGGTTCAACATTTAGATTCACCAGCAATTAAAGTTCATAAATATTCAGATGGCAAATGGAGACCAAGGGAATCTTTAATTGTTTTCCAATCACCATACGTCCTCGAGACTGTCTCGCATCTTCTTCAAAAAGGTGTAGAGCGTGATCTTGTGGACTTTGATAATTACCTCGATGATCAGAGCCAGGATTGGACCAATCAGGGCATAGAGAAACTAGTGGCGAGCATTAACGCTTCTACCCTCGATGATGATGATGAGAAGGAAATACGATAG
Protein
MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLVASINASTLDDDDEKEIR

Summary

Similarity
Belongs to the EMC8/EMC9 family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  ER membrane protein complex subunit 8/9 homolog
EMBL
BABH01012401    BABH01012402    BABH01012403    ODYU01003143    SOQ41525.1    NWSH01000889    + More
PCG73666.1    KZ149896    PZC78742.1    GDQN01010045    GDQN01004937    JAT81009.1    JAT86117.1    AGBW02008141    OWR54116.1    KQ460971    KPJ10136.1    KQ459590    KPI97176.1    GFDF01009835    JAV04249.1    AJWK01000548    AK417654    BAN20869.1    GDAI01001015    JAI16588.1    CVRI01000063    CRL04589.1    CCAG010012181    EZ423173    ADD19449.1    GANO01000828    JAB59043.1    JXJN01022183    CH940648    EDW62083.1    KRF80435.1    EZ422520    ADD18796.1    KK852729    KDR17552.1    GAKP01000042    JAC58910.1    GDHF01011104    JAI41210.1    GAPW01004772    JAC08826.1    JRES01000760    KNC28523.1    CM000158    EDW92234.1    KRK00423.1    JXUM01019647    KQ560550    KXJ81925.1    GEDC01029805    JAS07493.1    GAPW01004720    JAC08878.1    GBXI01014710    JAC99581.1    DS235269    EEB14102.1    CH477282    EAT44902.1    GDKW01001070    JAI55525.1    GAHY01000702    JAA76808.1    CH954179    EDV56713.1    AY075566    AAL68373.2    AE013599    KA645630    AFP60259.1    CH480824    EDW56855.1    CM000362    CM002911    EDX08278.1    KMY95905.1    GAMC01002534    JAC04022.1    CH916367    EDW02085.1    CH963846    EDW72305.1    CH902619    EDV37628.1    OUUW01000001    SPP74641.1    GEZM01047902    JAV76696.1    CH479210    EDW32845.1    CM000071    EAL26470.1    GGFJ01009580    MBW58721.1    GGFK01009467    MBW42788.1    AAAB01008972    EAL39415.2    APCN01007833    GGFM01004916    MBW25667.1    NNAY01000287    OXU29468.1    GFDG01002284    JAV16515.1    CH933808    EDW09520.1    AXCN02002427    GFDL01000856    JAV34189.1    ADMH02000998    ETN64480.1    ATLV01020934    KE525310    KFB45914.1    KK107455    QOIP01000010    EZA50472.1    RLU17878.1    AXCM01001234    CP012524    ALC40941.1    GAPW01004700    JAC08898.1    KQ971321    EFA00106.1    GEBQ01030758    JAT09219.1    GFTR01003505    JAW12921.1    GECL01003321    JAP02803.1    KQ434777    KZC04215.1    GBBI01000715    JAC17997.1    ADTU01008865    KQ981382    KYN42196.1    GDRN01086613    JAI61141.1    GL888218    EGI64508.1    GECZ01022459    JAS47310.1    GAMD01001148    JAB00443.1    GBHO01033671    GBRD01002538    GDHC01009874    JAG09933.1    JAG63283.1    JAQ08755.1    KQ976618    KYM79221.1    GL732584    EFX74287.1    GL453780    EFN75526.1   
Pfam
PF03665   UPF0172
Interpro
IPR005366   EMC8/9        + More
IPR037518   MPN       

Ontologies

Topology

Length:
216
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03819
Exp number, first 60 AAs:
0.03626
Total prob of N-in:
0.05022
outside
1  -  216
 
 

Population Genetic Test Statistics

Pi
455.905749
Theta
214.591724
Tajima's D
3.517065
CLR
1.147806
CSRT
0.995350232488376
Interpretation
Uncertain
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