Gene

KWMTBOMO06427  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011599

Annotation

signal_sequence_receptor_precursor_[Bombyx_mori]

Location

Bomo_Chr11(+):6932651-6938938      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.018

CDS

ATGAAATTAATATATTTTACGTTCTTGATTGTACCGGCGGCTTTATTATGCCTTGGAAGCGGTAACATCTTAGCTAGAGCAGAAGAGGATGAACTTGATGATGTTGTCGACATTGAAGGAGAAGACAACCAGGTAGTCGGTGACGATGCTCTCGTAGATGATGATGAGAGTGTTGTTAAGTCATCTCAGGATATTGATACAACAATACTGTTCACCAAACCTGTGCCTAGCTTGGGTGACTTAACTTTCGATATTCAAGCTGGTTACCCAGTGGAATTTTTTGTGGGCTTCATCAACAAGGGTTCCGTAGACTATGTAGTAGAATCCATGGAGGCATCTTTCCGGTATCCAATGGACTACACATACTACATTCAGAACTTCACCGCGTTGCCTTATAACAGAGAAGTTAAGCCAAAACAGGAAGCCACCTTTGCCTATTCCTTCATCCCCAATGAAGCTTTTGCTGGAAGACCTTTCGGATTAAATGTGCAGCTTAATTACAGAGATGCCAGCGGAAATGCTTACCAGGAAGCAGTCTACAACCAGACACTCAACATTGTGGAAGTATCCGAAGGTCTAGATGGAGAGACATTCTTCTTATATGTCTTCCTTGGTGCTGGTGGAGTGTTGGCTCTCGTCGCAGGACAGCAAGCCCTCGCTTCATTGGCCAGACGTAGATCACCACGTTCAGTGTCTCAGCCCGTTGAAACTGGAACAGCCAGTGAAGTAGACTATGACTGGCTACCTAAAGAAATTGTGAATCAACTCAAAAAATCTCCCAAGACGCCGAAGCAGTCGCCGCGCGCAAGGAAAGCAAAGAGATCAGCAGGCGACGACTAA

Protein

MKLIYFTFLIVPAALLCLGSGNILARAEEDELDDVVDIEGEDNQVVGDDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFLGAGGVLALVAGQQALASLARRRSPRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD

Uniprot

Q2F5L0   A0A3G1T1J9   A0A3S2L7F1   I4DJ05   A0A0N1PH20   I4DN16   + More
S4PBB9   A0A1E1WT20   A0A2W1BUL3   A0A2A4J1I6   A0A2H1W4W5   E3UKP9   A0A212FK41   A0A2J7PCZ7   A0A023ENQ8   A0A182GFZ8   A0A023EMK7   A0A232F8U9   A0A0P6IT12   A0A170Y3V2   B0XFI4   U5ESU1   R4FQ38   B8RJF4   A0A0C9QRG9   A0A1Q3FEI3   A0A067REZ9   A0A224XUJ4   A0A182VEJ6   A0A182U753   A0A182LA29   Q7PY28   A0A182HLP0   A0A182WST6   A0A026WL01   D6WHE5   A0A182RZN0   A0A224XTP2   A0A182JU80   A0A1L8DUH2   A0A182PSI5   A0A0T6B8A2   A0A182MBG6   A0A1B6M708   A0A182VZM4   A0A0L7QNT4   A0A1J1IA74   A0A182NRT4   A0A182Y3T4   A0A2M4A713   T1E8B2   A0A2M3YZZ7   A0A158NXZ7   A0A2A3EF06   A0A0N0U384   W5JBF1   A0A2M4A577   A0A088A6M3   B3N070   A0A2M4BVW9   A0A182FPJ3   Q9W335   B3NT65   A0A182QGY5   A0A336LU05   A0A182J4Z6   B4PWX0   B4IDH0   A0A336L2A4   A0A1Y1KFE3   A0A084VLC1   A0A0P4WHD0   A0A1W4XUL7   B4JIP8   A0A1B6CHQ9   A0A154P1F4   B4NDZ9   A0A1L8EHJ8   A0A195ED21   A0A2P8XM45   W8BVK4   A0A034WKP4   E2B9X6   A0A1I8PMP3   A0A0A1WJG2   B4M220   B4L8F1   A0A146LEQ3   A0A0A9YTV1   A0A170Y3R8   A0A0K8UBB9   B4GVB2   Q29ID3   J3JZ13   T1DJS8   A0A1W4VHS9   A0A3B0KNX4   A0A0M4EZB7   R4WDU7  

Pubmed

19121390    22651552    26354079    23622113    28756777    22118469    + More
24945155    26483478    28648823    26999592    24845553    20966253    12364791    14747013    15944077    17210077    24508170    30249741    18362917    19820115    25244985    21347285    20920257    23761445    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    28004739    24438588    29403074    24495485    25348373    20798317    25830018    26823975    25401762    15632085    22516182    24330624    23691247   

EMBL

BABH01012407    BABH01012408    DQ311413    ABD36357.1    MG992404    AXY94842.1    + More
RSAL01000104    RVE47397.1    AK401273    KQ459590    BAM17895.1    KPI97173.1    KQ460971    KPJ10140.1    AK402684    BAM19306.1    GAIX01005987    JAA86573.1    GDQN01000879    JAT90175.1    KZ149896    PZC78738.1    NWSH01003679    PCG65945.1    ODYU01006349    SOQ48121.1    HM449923    ADO33058.1    AGBW02008141    OWR54113.1    NEVH01026401    PNF14198.1    GAPW01003027    JAC10571.1    JXUM01060986    KQ562129    KXJ76626.1    GAPW01003026    JAC10572.1    NNAY01000704    OXU26889.1    GDUN01000987    JAN94932.1    GEMB01003693    JAR99527.1    DS232930    EDS26822.1    GANO01003095    JAB56776.1    ACPB03016596    GAHY01000609    JAA76901.1    EZ000579    ACJ64453.1    GBYB01006284    JAG76051.1    GFDL01009078    JAV25967.1    KK852729    KDR17543.1    GFTR01004805    JAW11621.1    CR954257    AAAB01008987    CAJ14158.1    EAA01377.3    APCN01000909    KK107167    QOIP01000010    EZA56351.1    RLU17850.1    KQ971321    EFA00653.1    GFTR01004953    JAW11473.1    GFDF01004000    JAV10084.1    LJIG01009323    KRT83309.1    AXCM01000026    GEBQ01008296    JAT31681.1    KQ414843    KOC60302.1    CVRI01000044    CRK96468.1    GGFK01003266    MBW36587.1    GAMD01002923    JAA98667.1    GGFM01001065    MBW21816.1    ADTU01002828    ADTU01002829    KZ288263    PBC30300.1    KQ435955    KOX68044.1    ADMH02001712    ETN61326.1    GGFK01002645    MBW35966.1    CH902640    EDV38274.1    GGFJ01008068    MBW57209.1    AE014298    AY069541    AAF46502.1    AAL39686.1    AHN59528.1    CH954180    EDV46245.1    AXCN02001148    UFQT01000110    SSX20163.1    CM000162    EDX02854.1    CH480830    EDW45628.1    UFQS01001536    UFQT01001536    SSX11396.1    SSX30964.1    GEZM01087017    JAV58910.1    ATLV01014444    KE524972    KFB38765.1    GDRN01053456    GDRN01053455    JAI66170.1    CH916370    EDW00495.1    GEDC01024319    JAS12979.1    KQ434786    KZC05174.1    CH964239    EDW81968.1    GFDG01000674    JAV18125.1    KQ979074    KYN22717.1    PYGN01001739    PSN33071.1    GAMC01005612    JAC00944.1    GAKP01002801    JAC56151.1    GL446605    EFN87563.1    GBXI01015300    JAC98991.1    CH940651    EDW65724.1    CH933815    EDW07926.1    GDHC01013619    JAQ05010.1    GBHO01008558    JAG35046.1    GEMB01003694    JAR99526.1    GDHF01028441    JAI23873.1    CH479192    EDW26649.1    CH379063    EAL32720.1    BT128494    AEE63451.1    GALA01000081    JAA94771.1    OUUW01000011    SPP86851.1    CP012528    ALC49492.1    AK417864    BAN21079.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000053240    UP000218220    UP000007151    + More
UP000235965    UP000069940    UP000249989    UP000215335    UP000002320    UP000015103    UP000027135    UP000075903    UP000075902    UP000075882    UP000007062    UP000075840    UP000076407    UP000053097    UP000279307    UP000007266    UP000075900    UP000075881    UP000075885    UP000075883    UP000075920    UP000053825    UP000183832    UP000075884    UP000076408    UP000005205    UP000242457    UP000053105    UP000000673    UP000005203    UP000007801    UP000069272    UP000000803    UP000008711    UP000075886    UP000075880    UP000002282    UP000001292    UP000030765    UP000192223    UP000001070    UP000076502    UP000007798    UP000078492    UP000245037    UP000008237    UP000095300    UP000008792    UP000009192    UP000008744    UP000001819    UP000192221    UP000268350    UP000092553   

PRIDE

Q2F5L0    Q9W335   

Pfam

PF03896   TRAP_alpha        + More
PF00300   His_Phos_1
PF04511   DER1

Interpro

IPR005595   TRAP_alpha        + More
IPR013078   His_Pase_superF_clade-1       
IPR029033   His_PPase_superfam       
IPR007599   DER1       

SUPFAM

SSF53254   SSF53254       

Gene 3D

3.40.50.1240    

CDD

cd07067  HP_PGM_like

ProteinModelPortal

Q2F5L0   A0A3G1T1J9   A0A3S2L7F1   I4DJ05   A0A0N1PH20   I4DN16   + More
S4PBB9   A0A1E1WT20   A0A2W1BUL3   A0A2A4J1I6   A0A2H1W4W5   E3UKP9   A0A212FK41   A0A2J7PCZ7   A0A023ENQ8   A0A182GFZ8   A0A023EMK7   A0A232F8U9   A0A0P6IT12   A0A170Y3V2   B0XFI4   U5ESU1   R4FQ38   B8RJF4   A0A0C9QRG9   A0A1Q3FEI3   A0A067REZ9   A0A224XUJ4   A0A182VEJ6   A0A182U753   A0A182LA29   Q7PY28   A0A182HLP0   A0A182WST6   A0A026WL01   D6WHE5   A0A182RZN0   A0A224XTP2   A0A182JU80   A0A1L8DUH2   A0A182PSI5   A0A0T6B8A2   A0A182MBG6   A0A1B6M708   A0A182VZM4   A0A0L7QNT4   A0A1J1IA74   A0A182NRT4   A0A182Y3T4   A0A2M4A713   T1E8B2   A0A2M3YZZ7   A0A158NXZ7   A0A2A3EF06   A0A0N0U384   W5JBF1   A0A2M4A577   A0A088A6M3   B3N070   A0A2M4BVW9   A0A182FPJ3   Q9W335   B3NT65   A0A182QGY5   A0A336LU05   A0A182J4Z6   B4PWX0   B4IDH0   A0A336L2A4   A0A1Y1KFE3   A0A084VLC1   A0A0P4WHD0   A0A1W4XUL7   B4JIP8   A0A1B6CHQ9   A0A154P1F4   B4NDZ9   A0A1L8EHJ8   A0A195ED21   A0A2P8XM45   W8BVK4   A0A034WKP4   E2B9X6   A0A1I8PMP3   A0A0A1WJG2   B4M220   B4L8F1   A0A146LEQ3   A0A0A9YTV1   A0A170Y3R8   A0A0K8UBB9   B4GVB2   Q29ID3   J3JZ13   T1DJS8   A0A1W4VHS9   A0A3B0KNX4   A0A0M4EZB7   R4WDU7  

KEGG

778461    K13249 translocon-associated protein subunit alpha | (RefSeq) signal sequence receptor

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0005789   GO:0016021   GO:0005783   GO:0045169   GO:0012505   GO:0030170   GO:0003824   GO:0005887   GO:0016020   GO:0043412   GO:0015074   GO:0015923   GO:0005634   GO:0006260  

SignalP

Position:   1 - 27,         Likelihood:  0.948528

 

 

Length:

279

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

35.30629

Exp number, first 60 AAs:

14.87186

Total prob of N-in:

0.35513

POSSIBLE N-term signal

sequence

outside

1  -  279

 

 

Pi

277.072247

Theta

212.289654

Tajima's D

0.941585

CLR

1.302918

CSRT

0.643617819109045

Interpretation

Uncertain