Gene

KWMTBOMO06423

Pre Gene Modal

BGIBMGA011950

Annotation

PREDICTED:_sodium-dependent_neutral_amino_acid_transporter_B(0)AT3_[Plutella_xylostella]

Location

Bomo_Chr11(-):6880963-6883500      View in EpiBrowser

Full name

Transporter      

Location in the cell

PlasmaMembrane   Reliability : 2.343

CDS

ATGAGCAGTTCGCATGTCGAACTCTTCGTCAGAGTCGACGAATTCGACGTGCTATTTGCTGATGATATAGAACTGATGACCGGACAACGACCAGGTATTTACTGGTTGATCTGTTGGAAGTATCTGTCTCCGCTGGCCATGTTGTCCATTCTCGTGTCATCGTTCGCGGAACTAGCTATGGAGGGATCCGGGTATGAAGCGTGGGTCTCGTCCGAAGGGGACACCGTGAAGAAACCCTGGCCCGTGTGGGCGGTTTTGCTCGTGGTCGTCCTGGTATTGGCATCTGTACTGTGGATCCCTGTAGTTGCGATTTGCAGATACTTCGGATATCCTATCGTAGAGGACGAGGAGCGCGCCTGGTTTCCCGCCGAAGACCTTCGTGATTTTCACGGCATCGAGCCAAGACCGGTCTCCGCGGCGGAGACCCTTCTGTTCTGCACTAGGCCTGACGGCAGCGAGGGCTGCTGCTGGCCTGGATGTTGCGAAACTGACGATGAGGAGTAA

Protein

MSSSHVELFVRVDEFDVLFADDIELMTGQRPGIYWLICWKYLSPLAMLSILVSSFAELAMEGSGYEAWVSSEGDTVKKPWPVWAVLLVVVLVLASVLWIPVVAICRYFGYPIVEDEERAWFPAEDLRDFHGIEPRPVSAAETLLFCTRPDGSEGCCWPGCCETDDEE

Similarity

Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.

Uniprot

H9JQZ3   A0A212F7Q5   A0A2W1BYK9   A0A2A4J2I1   A0A2H1VB97   A0A194PUT7   + More
A0A0L7LNX9   A0A194REL8   A0A195FFX7   A0A0J7L8S8   E2AIM7   A0A3L8DFG3   K7JUM7   A0A151XIK1   A0A195AW29   A0A195DUT1   A0A158NFB8   E2B634   E9IDL1   A0A026WYB0   A0A232ES14   A0A195CRF3   A0A2A3EK71   F4WDU6   A0A310SFP8   N6TH77   A0A0M9A559   A0A0L7R0Y6   A0A1B6JHP6   V9IIT8   A0A087ZZD7   A0A067QK51   A0A1B6CWY7   A0A2J7PQJ5   A0A1W4XVE7   D6WF78   A0A1Y1K5N2   A0A2R7WZI5   T1I2Z2   E0VLT1   A0A336MM67   W5J3Z6   A0A1S4FAC8   Q17AJ1   A0A182GTQ1   B0W9D9   A0A182T4D4   A0A182FK95   A0A182N0X1   A0A182IQ63   A0A182YCR3   A0A182Q4H7   A0A1J1I9A8   A0A182W5V4   A0A182M6Y4   A0A182X7D4   A0A1A9ULI3   A0A1A9X7Q0   A0A182TEQ0   A0A1A9ZZD9   A0A182IA05   A0A182V1D1   A0A182RKR6   A0A084VQ96   A0A182KAF6   Q7PRN6   A0A1A9W244   A0A1I8MX21   A0A0L0C570   W8BPP3   A0A1B0AL60   A0A182PU45   A0A1B0FAE9   E9G7X0   A0A1D2NGC4   A0A1I8P2J0   T1J242   B4L8L5   A0A0P6JIK8   A0A0P5AI26   A0A0P6B6Q4   B4JIW6   T1ISA1   B4ND29   A0A0Q9WLC7   B4M1X1   B3NSP8   Q9W4S0   B4Q0J8   B4I171   Q8IRU1   Q29ID8   A0A3B0KLZ4   B7Z122   A0A1W4V8C1   B4R458   A0A226EX01   B3N065   A0A0M4EXL4   A0A0K2T2Z0  

Pubmed

19121390    22118469    28756777    26354079    26227816    20798317    + More
30249741    20075255    21347285    21282665    24508170    28648823    21719571    23537049    24845553    18362917    19820115    28004739    20566863    20920257    23761445    17510324    26483478    25244985    24438588    12364791    25315136    26108605    24495485    21292972    27289101    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085   

EMBL

BABH01028533    AGBW02009844    OWR49761.1    KZ149896    PZC78735.1    NWSH01003679    + More
PCG65946.1    ODYU01001388    SOQ37504.1    KQ459590    KPI97171.1    JTDY01000460    KOB77069.1    KQ460313    KPJ16027.1    KQ981617    KYN39261.1    LBMM01000247    KMR03124.1    GL439840    EFN66716.1    QOIP01000008    RLU19205.1    AAZX01009864    KQ982080    KYQ60118.1    KQ976732    KYM76174.1    KQ980322    KYN16660.1    ADTU01014193    ADTU01014194    ADTU01014195    GL445914    EFN88823.1    GL762454    EFZ21446.1    KK107064    EZA60823.1    NNAY01002512    OXU21159.1    KQ977444    KYN02689.1    KZ288230    PBC31586.1    GL888093    EGI67632.1    KQ761738    OAD57131.1    APGK01027141    APGK01027142    KB740648    KB630489    KB631709    KB632148    ENN79789.1    ERL83626.1    ERL85521.1    ERL89103.1    KQ435732    KOX77450.1    KQ414669    KOC64513.1    GECU01009094    JAS98612.1    JR049473    AEY60975.1    KK853359    KDR08170.1    GEDC01019463    JAS17835.1    NEVH01022635    PNF18602.1    KQ971319    EFA00300.1    GEZM01091823    JAV56752.1    KK856124    PTY24946.1    ACPB03006720    DS235281    EEB14337.1    UFQT01001722    SSX31522.1    ADMH02002177    ETN58048.1    CH477333    EAT43303.1    JXUM01087655    KQ563649    KXJ73558.1    DS231864    EDS40164.1    AXCN02001363    CVRI01000044    CRK96853.1    AXCM01002848    APCN01001081    ATLV01015153    KE525003    KFB40140.1    AAAB01008847    EAA06912.6    JRES01000902    KNC27425.1    GAMC01005628    JAC00928.1    JXJN01030043    CCAG010008637    CCAG010008638    GL732534    EFX84589.1    LJIJ01000048    ODN04311.1    JH431796    CH933815    EDW07990.1    GDIQ01006874    JAN87863.1    GDIP01203826    LRGB01002076    JAJ19576.1    KZS09409.1    GDIP01018964    JAM84751.1    CH916370    EDV99530.1    JH431429    CH964239    EDW82738.1    CH940651    KRF82337.1    EDW65675.1    CH954180    EDV45728.1    AE014298    BT001443    AAN09096.1    AAN71198.1    CM000162    EDX01282.1    CH480819    EDW53252.1    AAF45873.3    CH379063    EAL32715.3    OUUW01000011    SPP86856.1    ACL82883.1    CM000366    EDX17000.1    LNIX01000001    OXA62069.1    CH902640    EDV38269.1    CP012528    ALC48517.1    HACA01002586    CDW19947.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000037510    UP000053240    + More
UP000078541    UP000036403    UP000000311    UP000279307    UP000002358    UP000075809    UP000078540    UP000078492    UP000005205    UP000008237    UP000053097    UP000215335    UP000078542    UP000242457    UP000007755    UP000019118    UP000030742    UP000053105    UP000053825    UP000005203    UP000027135    UP000235965    UP000192223    UP000007266    UP000015103    UP000009046    UP000000673    UP000008820    UP000069940    UP000249989    UP000002320    UP000075901    UP000069272    UP000075884    UP000075880    UP000076408    UP000075886    UP000183832    UP000075920    UP000075883    UP000076407    UP000078200    UP000092443    UP000075902    UP000092445    UP000075840    UP000075903    UP000075900    UP000030765    UP000075881    UP000007062    UP000091820    UP000095301    UP000037069    UP000092460    UP000075885    UP000092444    UP000000305    UP000094527    UP000095300    UP000009192    UP000076858    UP000001070    UP000007798    UP000008792    UP000008711    UP000000803    UP000002282    UP000001292    UP000001819    UP000268350    UP000192221    UP000000304    UP000198287    UP000007801    UP000092553   

PRIDE

H9JQZ3    Q9W4S0    Q8IRU1    B7Z122   

Pfam

PF00209   SNF        + More
PF15011   CK2S

Interpro

IPR000175   Na/ntran_symport        + More
IPR037272   SNS_sf       
IPR002438   Neutral_aa_SLC6       
IPR029159   CK2S       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF161070   SSF161070        + More
SSF50978   SSF50978       

ProteinModelPortal

H9JQZ3   A0A212F7Q5   A0A2W1BYK9   A0A2A4J2I1   A0A2H1VB97   A0A194PUT7   + More
A0A0L7LNX9   A0A194REL8   A0A195FFX7   A0A0J7L8S8   E2AIM7   A0A3L8DFG3   K7JUM7   A0A151XIK1   A0A195AW29   A0A195DUT1   A0A158NFB8   E2B634   E9IDL1   A0A026WYB0   A0A232ES14   A0A195CRF3   A0A2A3EK71   F4WDU6   A0A310SFP8   N6TH77   A0A0M9A559   A0A0L7R0Y6   A0A1B6JHP6   V9IIT8   A0A087ZZD7   A0A067QK51   A0A1B6CWY7   A0A2J7PQJ5   A0A1W4XVE7   D6WF78   A0A1Y1K5N2   A0A2R7WZI5   T1I2Z2   E0VLT1   A0A336MM67   W5J3Z6   A0A1S4FAC8   Q17AJ1   A0A182GTQ1   B0W9D9   A0A182T4D4   A0A182FK95   A0A182N0X1   A0A182IQ63   A0A182YCR3   A0A182Q4H7   A0A1J1I9A8   A0A182W5V4   A0A182M6Y4   A0A182X7D4   A0A1A9ULI3   A0A1A9X7Q0   A0A182TEQ0   A0A1A9ZZD9   A0A182IA05   A0A182V1D1   A0A182RKR6   A0A084VQ96   A0A182KAF6   Q7PRN6   A0A1A9W244   A0A1I8MX21   A0A0L0C570   W8BPP3   A0A1B0AL60   A0A182PU45   A0A1B0FAE9   E9G7X0   A0A1D2NGC4   A0A1I8P2J0   T1J242   B4L8L5   A0A0P6JIK8   A0A0P5AI26   A0A0P6B6Q4   B4JIW6   T1ISA1   B4ND29   A0A0Q9WLC7   B4M1X1   B3NSP8   Q9W4S0   B4Q0J8   B4I171   Q8IRU1   Q29ID8   A0A3B0KLZ4   B7Z122   A0A1W4V8C1   B4R458   A0A226EX01   B3N065   A0A0M4EXL4   A0A0K2T2Z0  

PDB

4XPG     E-value=0.000379228,     Score=99

KEGG

101737854    K05048 solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/

GO

GO:0005328   GO:0016021   GO:0005887   GO:0015293   GO:0005886   GO:0006836   GO:0005326   GO:0051536   GO:0016740   GO:0043412   GO:0015074   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR11616  

Length:

167

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

43.32627

Exp number, first 60 AAs:

20.59501

Total prob of N-in:

0.78588

POSSIBLE N-term signal

sequence

inside

1  -  32

TMhelix

33  -  55

outside

56  -  79

TMhelix

80  -  102

inside

103  -  167

 

 

Pi

242.01211

Theta

163.68708

Tajima's D

1.489353

CLR

0.056789

CSRT

0.786410679466027

Interpretation

Uncertain