Gene

KWMTBOMO06407

Pre Gene Modal

BGIBMGA011963

Annotation

PREDICTED:_ubiquitin-conjugating_enzyme_E2_W_[Amyelois_transitella]

Location

Bomo_Chr11(-):6506445-6516170      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.412 Extracellular   Reliability : 1.161 Nuclear   Reliability : 1.53

CDS

ATGGCGGCTCTGTCTCCGTCCGAGCGGCGTCTTCAAAAAGAACTTATGTCATTGATGAAAGAACCACCTCCAGGAGTCACCGTAGACGGAGATCAGGCCAGTCAAAATCTAACACTATGGACAGTACACATGGAAGGCGTACCTGGAACATTATATGAAGGCGAAAAGTTCGTGTTGCAGTTCAAATTCACAAACAAATACCCCTTTGATTCCCCTGAAGTAACGTTCATAGGCAACAACATTCCCGTTCACCCGCACGTGTACTCGAACGGGCACATCTGCCTTTCGATCCTCACCGACGACTGGTCGCCGGCGCTGTCGGTGCAATCAGTCTGCCTCTCGATCGTGTCGATGCTCAGTAGCTGTAAGGAAAAGAGACGACCGCCTGATAATTCGTTCTACGTTAAAACCTGTAATAAAAATCCTAAGAAAACAAAATGGTGGTATCATGATGATTCGGTGTAG

Protein

MAALSPSERRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFIGNNIPVHPHVYSNGHICLSILTDDWSPALSVQSVCLSIVSMLSSCKEKRRPPDNSFYVKTCNKNPKKTKWWYHDDSV

Uniprot

A0A1E1WKG4   A0A2A4J0C4   A0A1E1WQX5   A0A194PV13   A0A2A4J231   S4PS73   + More
A0A0N1I960   A0A0T6B2I8   D6WH24   V5GTZ9   A0A158NFP6   A0A1Y1KG14   A0A088A5A1   R4WDM0   A0A0V0G9H4   R4G535   A0A0A9W0A9   N6ST61   E9IGH4   A0A2M3ZBA2   A0A2M4C1Y8   A0A2M4AVH9   A0A195DAN1   A0A195BDF2   A0A1W7R7S1   A0A2W1BZI8   J3JV04   A0A0K8TNY4   A0A2S2NDD0   Q7PIU2   A0A1B6CYI8   A0A0K8U4H2   A0A034W325   W8B2S3   A0A1Y1KNK9   J9JQ23   A0A151IHT9   A0A2A3ERZ3   Q28XJ5   B4GG88   A0A2M3ZIT7   A0A2M4C0W0   A0A2M4AVR0   W5JA11   A0A1Q3G4K7   B4LKN9   B4KN09   B3MIJ9   A0A1W4VQZ5   Q16YJ9   A0A0M4ET41   B4MNY0   A0A067R3G0   B4P840   B3NN57   A0A023EJ62   A0A3B0J0F6   A0A2M4AWD2   A0A0M9AE81   E2ASR1   A7UTL0   Q16LE6   A0A0A9VRA1   A0A310SM18   B4HMT8   B4QAM4   E2C4B8   Q8T972   A0A182WB60   A0A182TXT1   A0A182XD46   A0A182KVZ8   A0A026WHP9   B4J7T3   A0A182KCQ5   A0A1B0CJH9   A0A0N7ZCX5   A0A0K8V9M3   A0A034VZJ8   A0A182N873   A0A182QL81   A0A2P2I5K8   A0A182RA24   A0A182HMI0   A0A0L7QXB1   A0A1L8DSK6   A0A0A1X698   T1JFH0   A0A131XR34   A0A023GF23   G3MQW2   A0A1E1X069   A0A224Z392   A0A131YPQ1   L7M6N4   A0A3R7SZB6   A0A0K8UCK8   A0A034W1Z7   W8ANH3   A0A2R5LHG0  

Pubmed

26354079    23622113    18362917    19820115    21347285    28004739    + More
23691247    25401762    26823975    23537049    21282665    28756777    22516182    26369729    12364791    14747013    17210077    25348373    24495485    15632085    17994087    20920257    23761445    17510324    24845553    17550304    24945155    20798317    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20966253    24508170    25830018    28049606    22216098    28503490    28797301    26830274    25576852   

EMBL

GDQN01003551    JAT87503.1    NWSH01004140    PCG65441.1    GDQN01001645    JAT89409.1    + More
KQ459590    KPI97162.1    PCG65443.1    GAIX01000195    JAA92365.1    KQ460210    KPJ16582.1    LJIG01016137    KRT81505.1    KQ971321    EFA00121.1    GALX01000832    JAB67634.1    ADTU01014382    GEZM01084872    GEZM01084871    JAV60442.1    AK417649    BAN20864.1    GECL01001372    JAP04752.1    ACPB03006895    GAHY01000835    JAA76675.1    GBHO01045299    GBRD01016705    GDHC01011450    JAF98304.1    JAG49122.1    JAQ07179.1    APGK01057365    KB741280    KB631604    ENN70879.1    ERL84599.1    GL763048    EFZ20323.1    GGFM01005073    MBW25824.1    GGFJ01010030    MBW59171.1    GGFK01011459    MBW44780.1    KQ981063    KYN09926.1    KQ976514    KYM82232.1    GEHC01000433    JAV47212.1    KZ149897    PZC78677.1    BT127069    AEE62031.1    GDAI01001519    JAI16084.1    GGMR01002584    MBY15203.1    AAAB01008960    EAA44014.4    GEDC01018903    GEDC01016688    JAS18395.1    JAS20610.1    GDHF01030672    JAI21642.1    GAKP01010265    JAC48687.1    GAMC01019020    GAMC01019019    JAB87536.1    GEZM01084874    GEZM01084870    JAV60447.1    ABLF02027845    ABLF02027849    KQ977578    KYN01813.1    KZ288191    PBC34477.1    CM000071    EAL26321.2    CH479183    EDW35508.1    GGFM01007690    MBW28441.1    GGFJ01009670    MBW58811.1    GGFK01011524    MBW44845.1    ADMH02002072    ETN59599.1    GFDL01000349    JAV34696.1    CH940648    EDW61762.1    CH933808    EDW08836.1    CH902619    EDV38075.1    CH477515    EAT39708.1    CP012524    ALC40625.1    CH963848    EDW73819.1    KK852729    KDR17546.1    CM000158    EDW90087.1    CH954179    EDV56577.1    GAPW01004734    JAC08864.1    OUUW01000001    SPP74145.1    GGFK01011691    MBW45012.1    KQ435687    KOX81349.1    GL442346    EFN63543.1    EDO63641.1    CH477909    EAT35139.1    GBHO01045300    GBRD01016704    GBRD01009117    GDHC01009281    JAF98303.1    JAG49123.1    JAQ09348.1    KQ759893    OAD62071.1    CH480816    EDW47300.1    CM000362    CM002911    EDX06529.1    KMY92844.1    GL452440    EFN77213.1    AY070806    AE013599    KX531612    AAL48428.1    AAM68746.2    ANY27422.1    KK107199    EZA55555.1    CH916367    EDW01139.1    AJWK01014659    AJWK01014660    GDRN01057692    JAI65664.1    GDHF01016723    JAI35591.1    GAKP01010261    JAC48691.1    AXCN02001004    IACF01003686    LAB69297.1    APCN01004439    KQ414705    KOC63245.1    GFDF01004626    JAV09458.1    GBXI01012835    GBXI01007488    JAD01457.1    JAD06804.1    JH432162    GEFH01000435    JAP68146.1    GBBM01002946    JAC32472.1    JO844263    AEO35880.1    GFAC01006554    JAT92634.1    GFPF01013141    MAA24287.1    GEDV01007620    JAP80937.1    GACK01006270    JAA58764.1    QCYY01000775    ROT82793.1    GDHF01028016    GDHF01026159    JAI24298.1    JAI26155.1    GAKP01010266    GAKP01010263    GAKP01010262    GAKP01010259    GAKP01010258    GAKP01010257    JAC48694.1    GAMC01019018    GAMC01019017    JAB87537.1    GGLE01004838    MBY08964.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007266    UP000005205    UP000005203    + More
UP000015103    UP000019118    UP000030742    UP000078492    UP000078540    UP000007062    UP000007819    UP000078542    UP000242457    UP000001819    UP000008744    UP000000673    UP000008792    UP000009192    UP000007801    UP000192221    UP000008820    UP000092553    UP000007798    UP000027135    UP000002282    UP000008711    UP000268350    UP000053105    UP000000311    UP000001292    UP000000304    UP000008237    UP000000803    UP000075920    UP000075902    UP000076407    UP000075882    UP000053097    UP000001070    UP000075881    UP000092461    UP000075884    UP000075886    UP000075900    UP000075840    UP000053825    UP000283509   

PRIDE

Q8T972   

Pfam

PF00179   UQ_con        + More
PF00155   Aminotran_1_2
PF00459   Inositol_P

Interpro

IPR016135   UBQ-conjugating_enzyme/RWD        + More
IPR000608   UBQ-conjugat_E2       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR004839   Aminotransferase_I/II       
IPR015424   PyrdxlP-dep_Trfase       
IPR015422   PyrdxlP-dep_Trfase_dom1       
IPR000760   Inositol_monophosphatase-like       
IPR020550   Inositol_monophosphatase_CS       

SUPFAM

SSF54495   SSF54495        + More
SSF53383   SSF53383       

Gene 3D

3.10.110.10     3.40.640.10     3.90.1150.10    

CDD

cd00195  UBCc

ProteinModelPortal

A0A1E1WKG4   A0A2A4J0C4   A0A1E1WQX5   A0A194PV13   A0A2A4J231   S4PS73   + More
A0A0N1I960   A0A0T6B2I8   D6WH24   V5GTZ9   A0A158NFP6   A0A1Y1KG14   A0A088A5A1   R4WDM0   A0A0V0G9H4   R4G535   A0A0A9W0A9   N6ST61   E9IGH4   A0A2M3ZBA2   A0A2M4C1Y8   A0A2M4AVH9   A0A195DAN1   A0A195BDF2   A0A1W7R7S1   A0A2W1BZI8   J3JV04   A0A0K8TNY4   A0A2S2NDD0   Q7PIU2   A0A1B6CYI8   A0A0K8U4H2   A0A034W325   W8B2S3   A0A1Y1KNK9   J9JQ23   A0A151IHT9   A0A2A3ERZ3   Q28XJ5   B4GG88   A0A2M3ZIT7   A0A2M4C0W0   A0A2M4AVR0   W5JA11   A0A1Q3G4K7   B4LKN9   B4KN09   B3MIJ9   A0A1W4VQZ5   Q16YJ9   A0A0M4ET41   B4MNY0   A0A067R3G0   B4P840   B3NN57   A0A023EJ62   A0A3B0J0F6   A0A2M4AWD2   A0A0M9AE81   E2ASR1   A7UTL0   Q16LE6   A0A0A9VRA1   A0A310SM18   B4HMT8   B4QAM4   E2C4B8   Q8T972   A0A182WB60   A0A182TXT1   A0A182XD46   A0A182KVZ8   A0A026WHP9   B4J7T3   A0A182KCQ5   A0A1B0CJH9   A0A0N7ZCX5   A0A0K8V9M3   A0A034VZJ8   A0A182N873   A0A182QL81   A0A2P2I5K8   A0A182RA24   A0A182HMI0   A0A0L7QXB1   A0A1L8DSK6   A0A0A1X698   T1JFH0   A0A131XR34   A0A023GF23   G3MQW2   A0A1E1X069   A0A224Z392   A0A131YPQ1   L7M6N4   A0A3R7SZB6   A0A0K8UCK8   A0A034W1Z7   W8ANH3   A0A2R5LHG0  

PDB

2MT6     E-value=3.2922e-64,     Score=616

KEGG

101742775    K10688 ubiquitin-conjugating enzyme E2 W [EC:2.3.2.25] | (RefSeq) ubiquitin-conjugating enzyme E2 W

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0030170   GO:0009058   GO:0016740   GO:0005634   GO:0043161   GO:0061631   GO:0016874   GO:0046854   GO:0006513   GO:0004842  

Length:

154

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01758

Exp number, first 60 AAs:

0.00055

Total prob of N-in:

0.13027

outside

1  -  154

 

 

Pi

192.824632

Theta

173.82923

Tajima's D

0.48147

CLR

0.123643

CSRT

0.505674716264187

Interpretation

Possibly Positive selection