SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06382
Pre Gene Modal
BGIBMGA011924
Annotation
PREDICTED:_disks_large-associated_protein_5_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.463
 

Sequence

CDS
ATGGAGAGTTTCGACTTCCTGGCACTATTAAAGAAACACGAGAAGAAGCACAAACGAAAACCGATGCAGTTCGTTAGTGTTGCTGCTGGGGTTCAGAGGCGATTGCAAAACAATATCAGAGAACGTAAAAGCAATCGTCTTAGCATTTTTGATAGCATTAGAAAGTTGGAGAAATGTGACAGTCCTGTTGTACAGCTCACAAAAGCTCAACTCAAAGTAGAAAAGAGAAGGCAACAATTAGAGAAATGGAAGGAAGAGAAGGAGAAGCGAAAGAAGGAGGCTGCAGCGTTGAAGAAGAAACCATTCTTAACTGGAGTTCCACATGCGCCATCCAAATTAGTACCACCACCCCCAAAACCAATGCCAAGTACATCAGGCAGGGTCACACGATCACAGTCAGCCAAGAACAGAGCAAGTCAGAAGATTGATAGTGGAAAGTGTGCTTCACAGTCATTTGCACCAAAAAATGCTGTATTCAAACCTCCACAGAATTTGGTTAAACTCCCAAATTTGACTCAAAATAAACCTAAAGTCACCAAAAATACCAATTCCATTTTTGTATTTGATCCAGTAATACCTAAAAACTTGATGACCAAAGTAAATGATAATGTAAAAGTTAGTAAGCTTAAAAAACAAGTTGAGACAAATTTGATATGTAGCAAGAATACAGAGGCTAAAATGACTAAAGGGAAGGCTACCAAGCCAATCCAAAGGCAGAATTCACCAAAGAAAATAATCCATACATCTTCTAGTAGTGAAGTAGAGGAAAACATTCACTCTCCAATATTGAACTCATCAAGGAAATCTTTACCAGCACAGAACTCTCCTCAATTATACCAAAAAACTCCTCGCAAGTCAATTGGTGTTGTCCAAAATTTTACACCAAAGAATAACATACCTAAGAGTGAGTCAAGGTCAGAAGAGAAGTTGAGATCTCCTAAGTCCCCTACTAGCGATGTGTTGATGACCCCTGAACAGATAGCTGATGAGGCTAAAAAGATTAGTCCATGTGTGACAATGTCGAGGGGGAAGGCTAATGCTCGGAAAGAAATGAAAAAGAAATTAGAAGAAGGTCTCCTTGATGAGGATACATGTGACATTGAAAACGTGGACCATTTTAGAAAGCAATTGGCTTCAGAAGTGAAGCGCATGACAGAATTATGTGATACCTGGGAGAAGATCTCTGAGCAGACGCCTCTGCCTGATGCTATACAGGAGGGAGTCTTATCTGCTGTGGGTCAGGCTCGGCTGTTGATGTCCCAGAAGCTGATGCAGTTCTCAACCCTGGTGGAGCGCTGTGGCCGTCCGGAGCCCGGCGCCGCGCTCGTCACGCCCGCCGACCTGCACGGGTTCTGGGACATGGTGTTCATGCAGGTGGAAAATGTCGATATGCGTTTCAAGAAGCTTGAAGAACTTCGACTAAGAGGGTGGATTGACGACAAACCTGTTGAAGTAAAGAAGAAAATTACTAAGAATAATGTAAAGAAGACTTCAAAGCCTATGGGTGGAACAAGTAGATTGAGGGATATGATTGCCGCGGCAAGAAAAGCTAAAAAGGAACAAGAGTGCTATGAGGCTCCGAAACCGCCGGAGCTGGGGGTCAGCAAGACATTCGAGGCGGGGTTCTTCTGCGTGCAGTCACCGGTCCGCTCCCCGCGGGTCTCCACGCCGTCCACCAGTTGCACCTTGCTGAAGGCCGTGCTGTCCAGTGAAGCCAAGAAGGCTTCCGTTTCTGCCGCTAAAAATGCCGCATCGTTCGCCATGCTGCGTGCCGCGGGACTCGCCAAGAACATCGAGTGCGATGGAGTCGCGCCCTTACCGCAGACGCCGCTGAACCCAGTGAACGTATCCGCGACGCCGGCCCGCAGCATCCTCAAGTCGGCTCAAGCTGAAAGATCGAGCAAGAAATCCATCAAAGTCGTACTGTTCGACCGCTCCGATCTAGAGCCGGACTGCCCCTCGGACACAGAGAGGCCCGATTTGCACCAGGAAAATGAGAACAAAGAAAATTCTAGAAGAAAATCAAAATTGATCCGACAAGACGCTACAGAAGAGCGAAGCCCCGTCATGACGCGCAGCCGCCGGAAGAGCCTGCAGGGGGGCCGGGGCTCCGACGCCGCCACGAACTCGTCCAAGAAGAAGGCGCTGAGAGAAGTAGAACAGAACACGAGCGCAAGGGAGACTCCCGCGCGTTCTTCTAGAAGGAGGAAGAGCGGAGTCACCGTCGCCGCGTGA
Protein
MESFDFLALLKKHEKKHKRKPMQFVSVAAGVQRRLQNNIRERKSNRLSIFDSIRKLEKCDSPVVQLTKAQLKVEKRRQQLEKWKEEKEKRKKEAAALKKKPFLTGVPHAPSKLVPPPPKPMPSTSGRVTRSQSAKNRASQKIDSGKCASQSFAPKNAVFKPPQNLVKLPNLTQNKPKVTKNTNSIFVFDPVIPKNLMTKVNDNVKVSKLKKQVETNLICSKNTEAKMTKGKATKPIQRQNSPKKIIHTSSSSEVEENIHSPILNSSRKSLPAQNSPQLYQKTPRKSIGVVQNFTPKNNIPKSESRSEEKLRSPKSPTSDVLMTPEQIADEAKKISPCVTMSRGKANARKEMKKKLEEGLLDEDTCDIENVDHFRKQLASEVKRMTELCDTWEKISEQTPLPDAIQEGVLSAVGQARLLMSQKLMQFSTLVERCGRPEPGAALVTPADLHGFWDMVFMQVENVDMRFKKLEELRLRGWIDDKPVEVKKKITKNNVKKTSKPMGGTSRLRDMIAAARKAKKEQECYEAPKPPELGVSKTFEAGFFCVQSPVRSPRVSTPSTSCTLLKAVLSSEAKKASVSAAKNAASFAMLRAAGLAKNIECDGVAPLPQTPLNPVNVSATPARSILKSAQAERSSKKSIKVVLFDRSDLEPDCPSDTERPDLHQENENKENSRRKSKLIRQDATEERSPVMTRSRRKSLQGGRGSDAATNSSKKKALREVEQNTSARETPARSSRRRKSGVTVAA

Summary

Pfam
PF03359   GKAP
Interpro
IPR005026   SAPAP       
PDB
4R0Y     E-value=1.62625e-12,     Score=179

Ontologies

Topology

Length:
744
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  744
 
 

Population Genetic Test Statistics

Pi
192.395041
Theta
166.77193
Tajima's D
0.657915
CLR
1.056058
CSRT
0.55637218139093
Interpretation
Uncertain
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