SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06381  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011973
Annotation
PREDICTED:_diphosphoinositol_polyphosphate_phosphohydrolase_1_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.984
 

Sequence

CDS
ATGGTAAAGGAGAAGCCTAATTCGATAAGGATATATGACGACGAGGGTTTTAGGCGACGGGCGGCATGTATTTGCGTGCGTTCAGATGCCGAAACAGAGGTCCTGCTGGTGACGTCTTCGAGACGGCCCGACAACTGGATTGTGCCGGGCGGGGGAGTAGAGCCGGAAGAGGAGCCTTCTGTCACTGCGATGCGGGAGGTACTTGAGGAAGCCGGAGTGATCGGGAAACTAGGACGATGTCTTGGAGTATTCGAGAACCGAGAACACAAACACCGAACAGAGGTTTATGTTATGACTGTGACCCAAGAACTACCCGAGTGGGAGGATTCAAGACTCATGGGACGTAAGAGGCAATGGTTCTCCATTGATGATGCCCTGGCTCAGCTCGCCCTTCACAAGCCAATCCAGCGTCACTACCTTCAACAACTGCGTCGTTCCAAACAGAACAAGCAAGATGACCAGACTACGTATAACCTTCCCAGTTAG
Protein
MVKEKPNSIRIYDDEGFRRRAACICVRSDAETEVLLVTSSRRPDNWIVPGGGVEPEEEPSVTAMREVLEEAGVIGKLGRCLGVFENREHKHRTEVYVMTVTQELPEWEDSRLMGRKRQWFSIDDALAQLALHKPIQRHYLQQLRRSKQNKQDDQTTYNLPS

Summary

Similarity
Belongs to the Nudix hydrolase family.
EMBL
BABH01028609    ODYU01005074    SOQ45596.1    KZ149897    PZC78693.1    NWSH01001020    + More
PCG73077.1    GDQN01002220    JAT88834.1    AGBW02014545    OWR41470.1    KQ459692    KPJ20423.1    KQ459590    KPI97150.1    JTDY01002659    KOB70991.1    GBXI01001026    JAD13266.1    KZ149961    PZC76332.1    GAMC01014009    GAMC01014007    JAB92548.1    GDHF01028273    GDHF01001751    JAI24041.1    JAI50563.1    GAKP01013767    GAKP01013766    JAC45185.1    GDAI01000706    JAI16897.1    KA646906    AFP61535.1    KQ971322    EFA00788.1    GANO01001725    JAB58146.1    JRES01000997    KNC26280.1    GEZM01064843    JAV68634.1    GALA01000856    JAA93996.1    EZ422484    ADD18760.1    GALA01000880    JAA93972.1    GFDF01006666    JAV07418.1    CCAG010018755    GDHC01004979    JAQ13650.1    GFDL01016212    JAV18833.1    GFDL01016215    JAV18830.1    AXCM01008285    GFDL01016220    JAV18825.1    JXUM01157546    KQ572780    KXJ67997.1    APCN01001706    AAAB01008980    EAA14066.3    AXCN02000660    GGFJ01008670    MBW57811.1    ADMH02000223    ETN67330.1    GGFK01009007    MBW42328.1    GGFK01008843    MBW42164.1    GGFK01008917    MBW42238.1    GGFM01007506    MBW28257.1    AJWK01012667    CH477279    EAT45003.1    GGFM01004527    MBW25278.1    CH480815    EDW41017.1    CH982634    CM002912    EDX15714.1    KMY98895.1    AE014296    AY118969    AJ863561    AJ863562    AJ863563    AJ863564    AAF50123.1    AAM50829.1    AAN11888.1    AAN11889.1    CAI10728.1    CM000159    EDW94051.1    CH954178    EDV51339.1    GGFJ01008671    MBW57812.1    CH902618    EDV40656.2    CH940647    EDW70133.1    CH916366    EDV96980.1    CH933809    EDW19600.1    CP012525    ALC43501.1    CH379069    EAL31153.1    CH964154    EDW79884.1    OUUW01000009    SPP85428.1    KQ414716    KOC62852.1    KQ435692    KOX81073.1    KZ288488    PBC25222.1    KQ784160    OAD51874.1    KQ434827    KZC07570.1    GAPW01003992    JAC09606.1    ADTU01001536    CH479433    EDW30692.1    LBMM01000724    KMQ97626.1    GL437252    EFN70761.1    KQ977642    KYN00918.1    KQ976625    KYM79053.1    KQ981979    KYN31447.1    GBBI01000969    JAC17743.1    NNAY01000371    OXU28833.1    GFTR01002680    JAW13746.1    GECL01000378    JAP05746.1    GBGD01003290    JAC85599.1    GL887491    EGI71090.1    UFQS01000016    UFQT01000016    SSW97403.1    SSX17789.1    GL453568    EFN75868.1    GEDC01011506    JAS25792.1   
Pfam
PF00293   NUDIX        + More
PF00097   zf-C3HC4
PF02825   WWE
Interpro
IPR000086   NUDIX_hydrolase_dom        + More
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR020084   NUDIX_hydrolase_CS       
IPR020476   Nudix_hydrolase       
IPR018957   Znf_C3HC4_RING-type       
IPR013083   Znf_RING/FYVE/PHD       
IPR004170   WWE-dom       
IPR017907   Znf_RING_CS       
IPR001841   Znf_RING       
IPR018123   WWE-dom_subgr       
IPR033509   RNF146       
IPR037197   WWE_dom_sf       
SUPFAM
SSF55811   SSF55811        + More
SSF117839   SSF117839       
Gene 3D
PDB
5LTU     E-value=6.02253e-42,     Score=424

Ontologies

Topology

Length:
161
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.29078
outside
1  -  161
 
 

Population Genetic Test Statistics

Pi
306.465826
Theta
220.873824
Tajima's D
1.216491
CLR
0
CSRT
0.72186390680466
Interpretation
Uncertain
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