Silkworm Genome Informatics Database

Gene

KWMTBOMO06379

Pre Gene Modal

BGIBMGA011923

Annotation

PREDICTED:_coiled-coil_and_C2_domain-containing_protein_2A_[Bombyx_mori]

Location

Bomo_Chr11(+):5962211-5969115 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4

CDS

ATGTTTCCGAAAATCTTGGAGAACGCCGTTACACCACCGAAAACTGAACCACTCGCTCATTATGTTAATCCTGTTGTGTTTAATGATCTACTATCAAGTTATACTGGTCACGAAGATATTGTAACTGAAACTTTTCTAAACATAACTTTAGAAAACCTTAAATTTGAAAATCACTATCTTTTCTCACTTGAAAATCTTTTAAGTACGAAAATAACTGAACTTTTTGAGAGCTACGAAATAATTAAAAAGAAATTGTATAATTTGGATAGAGAGATAAAAATTAGTAGGGACACGAAAGATAATCTCAAAAAAGACTTATTATCAGCTAGCTCTAACAATCAGATGAATGTAAGATTTGAACCGACACTTAGAAAATATACAGAAAAGTTTTTTCAGTTTAAAAAACAATACAAAGAGACTTTATTATTAGAAAAAGAGATGTTTGATAAACTAATAACTTTGTGGATCGATATTGAATCAATACGGGCGAAATTGAAACGTATTAAAACACCTGTAATTTTAGTATTGAATGAGAAAAATGAAAATGAATTAAAAGAAAAATGGATGGAAGTTTTCAATCAGGAATACTCAGATTATTTAGATAAGATTGAATTTGATTACGTAGGTAAATACCTTCAGTATAAAACAGCAAAGAGTACAGGGGATGGCGTGGAAATTCGGAAGCCAAAATTGGAAATTGATGAAGATTTAATTAAGGCAGAGGTAGAGGGTTTTGTCAATGATGCAATTGAAGGGAAAAGGTTTGATTGTACTCTAGTGATAGATAATGGCATTGTGGGAAAAGGAATGAAATCAGTAGATAAAAAACCTGAGGTGGGGACTGAACTCGTTTATATTTTCGAAATTTACATTGACGATATATACGTTTGTGAGTCGGAACAATATCACACGAAAAGTTTTTCAGTAGATTTTAAGGAATCTTTCACCATACAAATTTTAAAACATAATCAGGCTTTAAAAATAATATTGCTAGAGAACGACGAACGATTTTCAGTTTTTAAACTAAATTTGAATGAAATAAAAGCTTATGCTACTGAATCAACAAGAATTAAATTTAAATATGATTGTGATATCAAACCTAATAGCAGATACATAGGGAGCGGAAACAGCATCAAAGAAATAACCAAAGTTCATGATGTGAGGTTGAAAAGCGGTCATTTATTCGACAGAGAAGTTGTTAGTACATGCACGGTCGGCTTGAGAATAACGTCGAAAGATCCAAACGTTGACAATGAAGCTGATGTGATAAAATCTTCAATGGCCACAGGAAGGCAAATACAAAGATTGCTACACGGAATAGACGAACCGAATTTAAGTTTGTTACTTGATTTGATAAATAAAGTATACGAACAGGATATTGGTCAAGACGAAGCTATGATAATGACACTAAAGCAATTGTGCAAAGAAAGGGTGCCTTTAAATAATAACTTTGGAGTAGACCTCGACGCTGCAGAATATACAAGACTTAAGCTATTGCGTTTGCGTAACGGAAGGGGCGCTGGCTCCCTGCGCGATATGGCGGTCCCCTTGCACGCCAGTCAGATAACCACAGAACAGTTGGAATACCTAAATAATTCCGACACTAATGATTTAGGCGTAGAGTATTTTAGAAGCAAGCGGCCTGATATGGATCCTATAGAACTAAAACGGTACACGGGAGTCAAGTATATCGAACGACTTAACAGTGATATGCTCCGCGAATTGAACGAGCGCTTGCTCAAGAAGACTTACAGGGATGTGGTTAGGGATTACAGCTACGGAGGCTGGAGAAGTTTCTTCTCAATCAATTCTCAATGGACGTCTTTGCCTCCTTCTGGGACTGCGTCAACGCAACAGCTCCTCAGAGAGTCTATAGGCCGAGAGCAGGACATATTAGTGACCGTCGTGAAGGCTCACAACTTGTTGGACAGGTGCCCCGAAATGTTGGAGGAAAACGAGTGCGAGGATAGGATTGCTGGGTTAAAAGTCAGACCACTCAGGCCTTTTGTGCGGGTAGAGTACCACGGTGCTTGTGCTCAAACCGCGACCGCCATCGGCTGTCACCCCACATGGAACCAGACTCTGAAGATCAACACTAAACTGTCTCCGCTCTCGTGTGTGCATGTCAACATTTATGACCAGTACAAAACGTATGTGCCGGACACTCTATCAGCCGGGGACGCGGGTAAAACGGTTCGTTACAGAATACACGACAGGTGGCTTGGAACTTTGGAAGTGCCCCTCTACGCCGTGTTGGCTATGGGCTCGCTGCGAGGTACATTCAGAATAACAACGCCACCCGTGGTATTCGGATACGAACCTTTGGAAACAAAAGAGGTGTCGCTAATGTCAACATTAAGTCAACTATTGAAAAAGGAAGTTTCCTTCATCACTTTGAACATTACGAGCAGTCTGTTTCATTTGGGCGGTTCACATGTCTACAATCAACCAACGCCCAACATGGACACCGATCGTTTGATCAAACATTTGAACCAATTCGTTACAGACTACAGTAACGATTTCCCTTCACGTCACTTGTCACTGACACTAATTAACAGTATGGGTGTCAACATTTGCAGCACGCAGTTTTTACGAAGCATCCCTCTGCCAGATCTAGATTGTTTCCCTAAAAATCCAAAGAATTGCGAATCAGCCGTTTCTAAGTCTTCAGGCCTATCCCAAAGCTCTTCTAGGAGTAGCGGGAGAAAGAAGGAAGTAGAAGTTGAAGAGGGTTCTATGTATAGCGGGGCAGCCAGTTGGAGAAATGTGAATGATGTCACAAAATTAGTCTGTGTTTGTATGAGATTTGTGTCGCTCATTCCATGTTATGACGTCACAGAAGCGCATGCTATCACACTGACGGGACCGGAACTGCTAAAGATGCTATACGGCACCCAACTTGACCACTCCATCCTGTTGGCCAGTTATTTTCTTCACTTAAACATAAAATATTGGGTCGCGATCGGCTTTGGACTCCCGAGAGGCTCGAGCAGCTACGTTTTAATTCAATATGACGTAAAGACCAAAAGAATAGTTCAGAGGGACGACGTTTTGAAAAGTGGATTTTTTGTTAAGAACGAATACGTTCTGTACGCGTGTGACGCCGCCTGCGGACACGCCTGGGACGTCAGAGACGACGCCTGTCCCATGAAGACCGTCCAATACGTCTTTGACGATCGCAACATATGGGTCAACGTTCAGTCGTCTCAGGACTGTGAGAACGTGTCCTTTAATTTTTTTAAATCGTCCGACTGGCGACCGGTTTTTGACAAAAGCACATTTCCAATAACCTCACCCAGAGGGAACGACTCGGGCTTGTACACAGTGCCGCCCGACGTCGACAACATCACTAATATTTTGGAAACGAAAATCAAAGCAAAGGTGCAAAAGTGGAGATCGCATTCCAAGACCATCTGGAACCGGTAA

Protein

MFPKILENAVTPPKTEPLAHYVNPVVFNDLLSSYTGHEDIVTETFLNITLENLKFENHYLFSLENLLSTKITELFESYEIIKKKLYNLDREIKISRDTKDNLKKDLLSASSNNQMNVRFEPTLRKYTEKFFQFKKQYKETLLLEKEMFDKLITLWIDIESIRAKLKRIKTPVILVLNEKNENELKEKWMEVFNQEYSDYLDKIEFDYVGKYLQYKTAKSTGDGVEIRKPKLEIDEDLIKAEVEGFVNDAIEGKRFDCTLVIDNGIVGKGMKSVDKKPEVGTELVYIFEIYIDDIYVCESEQYHTKSFSVDFKESFTIQILKHNQALKIILLENDERFSVFKLNLNEIKAYATESTRIKFKYDCDIKPNSRYIGSGNSIKEITKVHDVRLKSGHLFDREVVSTCTVGLRITSKDPNVDNEADVIKSSMATGRQIQRLLHGIDEPNLSLLLDLINKVYEQDIGQDEAMIMTLKQLCKERVPLNNNFGVDLDAAEYTRLKLLRLRNGRGAGSLRDMAVPLHASQITTEQLEYLNNSDTNDLGVEYFRSKRPDMDPIELKRYTGVKYIERLNSDMLRELNERLLKKTYRDVVRDYSYGGWRSFFSINSQWTSLPPSGTASTQQLLRESIGREQDILVTVVKAHNLLDRCPEMLEENECEDRIAGLKVRPLRPFVRVEYHGACAQTATAIGCHPTWNQTLKINTKLSPLSCVHVNIYDQYKTYVPDTLSAGDAGKTVRYRIHDRWLGTLEVPLYAVLAMGSLRGTFRITTPPVVFGYEPLETKEVSLMSTLSQLLKKEVSFITLNITSSLFHLGGSHVYNQPTPNMDTDRLIKHLNQFVTDYSNDFPSRHLSLTLINSMGVNICSTQFLRSIPLPDLDCFPKNPKNCESAVSKSSGLSQSSSRSSGRKKEVEVEEGSMYSGAASWRNVNDVTKLVCVCMRFVSLIPCYDVTEAHAITLTGPELLKMLYGTQLDHSILLASYFLHLNIKYWVAIGFGLPRGSSSYVLIQYDVKTKRIVQRDDVLKSGFFVKNEYVLYACDAACGHAWDVRDDACPMKTVQYVFDDRNIWVNVQSSQDCENVSFNFFKSSDWRPVFDKSTFPITSPRGNDSGLYTVPPDVDNITNILETKIKAKVQKWRSHSKTIWNR

Uniprot

H9JQW7 A0A2H1VXM2 A0A2A4JMR7 A0A2W1BYL8 A0A0L7L6B7 A0A212EJ12 + More
A0A194PWL5

Pubmed

19121390 28756777 26227816 22118469 26354079

EMBL

BABH01028609 ODYU01005074 SOQ45597.1 NWSH01001020 PCG73076.1 KZ149897 + More
PZC78694.1 JTDY01002659 KOB70997.1 AGBW02014545 OWR41469.1 KQ459590 KPI97149.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000007151 UP000053268

PRIDE

H9JQW7

Pfam

PF00168 C2

Interpro

IPR000008 C2_dom + More
IPR035892 C2_domain_sf

Gene 3D

2.60.40.150

ProteinModelPortal

H9JQW7 A0A2H1VXM2 A0A2A4JMR7 A0A2W1BYL8 A0A0L7L6B7 A0A212EJ12 + More
A0A194PWL5

KEGG

101739067 K19352 coiled-coil and C2 domain-containing protein 2A | (RefSeq) coiled-coil and C2 domain-containi

GO

GO:0005515 GO:0008270 GO:0051903 GO:0016491 GO:0016310 GO:0016627 GO:0030145 GO:0015923 GO:0005634 GO:0006260

Length:

1141

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.583739999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1 - 1141

Pi

188.152571

Theta

201.623137

Tajima's D

-0.923645

CLR

149.597674

CSRT

0.151292435378231

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics