Silkworm Genome Informatics Database

Gene

KWMTBOMO06366

Pre Gene Modal

BGIBMGA011979

Annotation

PREDICTED:_serine/threonine-protein_kinase_SMG1-like_[Bombyx_mori]

Location

Bomo_Chr11(-):5794333-5800310 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.491

CDS

ATGCATGTACTCTATACATGTTCTGTATCTCACAACATAGACCGCAAATACATTTATTTGTCTCTGCAGGCGACTCTCCAAAGCCCCGTGATGCGGTCGGTCTTGGAGGACATATTCCTGGTGCGCCGCATCCAGACCATCGCGGAAGTGTTCGCCATGTGCACGCAGATGGCGTGCGCCTTCAAGGGCACCGGACCCTTGAGTGTTTATGATGACGCAGCGCTGTGCAAGCCCGTCAGACGCTTCACAGCGGAGTACGTATCGCGCTGTACGCTGGGCGTGGGCTCACGAGCTCTGGCGGCCGCGCTCTGTCTCCTGCTACATCGGCACGGAGTCGACATTGCTGCCGAAGTGGAACAGAAGGAAATTGGTGCGTCGTGGAGCGTGTCGTTGGAGTCGTTGTGCGAGAAGGCGGCGGGCGGGGAGCGCGGGGCGGCGCTCGTGCGCGACGTGCAGGCCGCTCGTGCCGCGCTCTGTGCCGCCGCCGCCGTGCTGCGCGCGCACGCACGGGCGCTCACCACCTCGCACCACGCGGCCCGCGCGCACCTTGCGCACCTGCATCTGCACCACGAGACCGTCGGCGGGCACCGCGACCTGTGCGCGTTGCTGGCGCGGCGCTCGCGGGAGTTGTCCGCGGGCCTCGAGCGGCTCACCGCCGCCGCCGCCAAGATGAAGTCTCTGCTAAACTCGGCTCACCAGAGAGTAAAATGGGGCGCCGGCGCCAACCCGTCGCTGTCGAGCATCGTGTCGCGGCTGGAGCAGGCCGGCGCCGCCGCAGACACGCGGGCTGCGCGAGCCCTATCCGCCGCCGCCGCGCTCACCGCGCCCGCCCGCTGCGCCGCTCGCGCCCGCCTACGACCGCCGCGACACGCGCGCACCCTCGCCGCCGCCCTGCACCACTGGGAGAAGGCGTGCACCCTAGCGCAGAAGTACGCCCTGGATGTGTCGCCGGTGGAAGAAGCCCTCATGGAGATGTTGCACCCTGAAGGGAATATAGATACACAATGGGTCGAGAACGTCTCGGCGCTGCTCCGCGAGATGATAGCGCAGCTGGTGGCAGATGTTGCCGCCCGCCAGGAGCGCGCGGCGAGCGCGGGTGCCAGCGTGCGGGAGAGCGTGCGGGGTGCGGGCGCGGCGGGCGCGGCCTGGCGTGACGTCACGGCCGCCGCGGCGCCGCATCTGCTGGTGCTGCAGCCGGCGCTGCAGGGCAACAACCCCGCGCAGGAGTACCTGAGTATGGAGCGCGAGCTGTCGCGCGAGCTGGCGGCGCTGAAGGCGGGTGCGGCGGGGAGCGGCGCGGCGGGGGGCGCGGCGGCGGGGGGCGCGGCGGCGGGCGACGTGTCCCGCGGCGCGCGGCGCGTGCGCGAGCTGCTGCCGGCGCTGGCGCACACGCTACTGCATGTCCACGAGAACTGGCCGACGGAGCAGGGCGGCCGCAAGCTGACGAGACAGGCCGCCGTCACCTCCAACAACAAGCACGCGTGCGAGAGCGCGGTGGGCGCCAGCGTGTGGCGCCGGGTGCGGCTCAAGCTGGAGGGGAGGCCGCAGCCGCACGAGCTGGTGGACCACCTGATATCTGAGGCCACCAGCGCGGAAAACCTGTGCCTGATGTACGAAGGCTGGATGGCCTGGGTGTGA

Protein

MHVLYTCSVSHNIDRKYIYLSLQATLQSPVMRSVLEDIFLVRRIQTIAEVFAMCTQMACAFKGTGPLSVYDDAALCKPVRRFTAEYVSRCTLGVGSRALAAALCLLLHRHGVDIAAEVEQKEIGASWSVSLESLCEKAAGGERGAALVRDVQAARAALCAAAAVLRAHARALTTSHHAARAHLAHLHLHHETVGGHRDLCALLARRSRELSAGLERLTAAAAKMKSLLNSAHQRVKWGAGANPSLSSIVSRLEQAGAAADTRAARALSAAAALTAPARCAARARLRPPRHARTLAAALHHWEKACTLAQKYALDVSPVEEALMEMLHPEGNIDTQWVENVSALLREMIAQLVADVAARQERAASAGASVRESVRGAGAAGAAWRDVTAAAAPHLLVLQPALQGNNPAQEYLSMERELSRELAALKAGAAGSGAAGGAAAGGAAAGDVSRGARRVRELLPALAHTLLHVHENWPTEQGGRKLTRQAAVTSNNKHACESAVGASVWRRVRLKLEGRPQPHELVDHLISEATSAENLCLMYEGWMAWV

Uniprot

A0A2H1VVF7

EMBL

ODYU01004674 SOQ44810.1

Pfam

PF02260 FATC

Interpro

IPR003152 FATC_dom

ProteinModelPortal

A0A2H1VVF7

PDB

6EMK E-value=0.078152, Score=85

KEGG

101739213 K08873 serine/threonine-protein kinase SMG1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase

GO

GO:0005515 GO:0008270 GO:0003824 GO:0009982 GO:0006744 GO:0016627 GO:0030145 GO:0015923 GO:0005634 GO:0006260

Length:

545

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.23732

Exp number, first 60 AAs:

0.03717

Total prob of N-in:

0.00556

outside

1 - 545

Pi

181.638679

Theta

143.368072

Tajima's D

0.886948

CLR

0.014329

CSRT

0.629818509074546

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics