Gene

KWMTBOMO06362

Pre Gene Modal

BGIBMGA011980

Annotation

hypothetical_protein_KGM_15115_[Danaus_plexippus]

Location

Bomo_Chr11(-):5771120-5771870      View in EpiBrowser

Full name

RNA helicase      

Location in the cell

Nuclear   Reliability : 2.26

CDS

ATGGGTGCAAAGGCGAGCACTGCGAACGGGGGGCAGAGTCCTCGCGCAAGGACATTCTCGACTAGCTCCGGGTCGGACGTGGTGTCGGGCGCGGCAGGGTTTAGCTTGTTGCGAGCCATCCCAGGAATTCAAGTGTCGAATGACCGGCAGCGCGCTCGGTCTCTGTCTTCAGTGCCGGACCTGCACGCTTCTCACGAAGCAATAGCCATACCCCCGAACTCGCAGAGCTATGAGGCTTCTGCAGCTGCGAGCCCCGACACAGATTCTAGTTCAAATGAGGAAACTGGTGCCGGACCGGCGGCGTCGCTGGCTCTGGGCCGTGTTTACGCAGCGCACTCCTTGCCTTCACATATTTGGTCAATAAATGGTGAGTTTTTATTTTTATTTGTGCCGAAACATGCTTGA

Protein

MGAKASTANGGQSPRARTFSTSSGSDVVSGAAGFSLLRAIPGIQVSNDRQRARSLSSVPDLHASHEAIAIPPNSQSYEASAAASPDTDSSSNEETGAGPAASLALGRVYAAHSLPSHIWSINGEFLFLFVPKHA

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Similarity

Belongs to the DEAD box helicase family.

Uniprot

H9JR20   A0A2H1VE40   A0A2W1BUQ9   A0A0N1IQ93   A0A212EIZ5   S4PPA0   + More
A0A194PUP8   A0A0L7LUL6   A0A1Y1KBN5   A0A0T6BEV6   A0A1W4XIS8   A0A067QUD5   A0A2P8YQD5   A0A139WLS8   A0A139WLL0   A0A1B6HT03   A0A1B6GG46   A0A1B6E449   U5EPP5   N6TE24   U4U153   A0A2S2Q6Z9   A0A1L8DT74   A0A2S2PS00   A0A1L8DSX8   A0A2H8TL37   A0A1B0CHG3   J9JQM0   A0A1J1HT52   A0A1B0D1W4   A0A154P607   E2A730   A0A3Q0J3P4   A0A1B0BX14   A0A0M4EU63   A0A1A9WA59   A0A1A9XXZ3   A0A1A9UM66   D3TRQ6   A0A1B0G5S1   T1INZ4   A0A1A9Z8J0   B4N1Y0   B4JXI0   A0A1I8NU93   A0A0P4VS91   R4FPR6   A0A0V0G7T8   A0A069DQ67   T1PJ18   A0A2R7WH39  

EC Number

3.6.4.13

Pubmed

19121390    28756777    26354079    22118469    23622113    26227816    + More
28004739    24845553    29403074    18362917    19820115    23537049    20798317    20353571    17994087    27129103    26334808    25315136   

EMBL

BABH01028619    ODYU01001816    SOQ38534.1    KZ149897    PZC78709.1    KQ459692    + More
KPJ20440.1    AGBW02014545    OWR41454.1    GAIX01000362    JAA92198.1    KQ459590    KPI97131.1    JTDY01000053    KOB79148.1    GEZM01093697    GEZM01093695    GEZM01093694    GEZM01093693    JAV56187.1    LJIG01001065    KRT85875.1    KK852999    KDR12661.1    PYGN01000433    PSN46459.1    KQ971319    KYB28900.1    KYB28899.1    GECU01029925    JAS77781.1    GECZ01008727    GECZ01008388    JAS61042.1    JAS61381.1    GEDC01005876    GEDC01004610    JAS31422.1    JAS32688.1    GANO01000092    JAB59779.1    APGK01033087    KB740860    ENN78604.1    KB631777    ERL86023.1    GGMS01004322    MBY73525.1    GFDF01004514    JAV09570.1    GGMR01019546    MBY32165.1    GFDF01004515    JAV09569.1    GFXV01002876    MBW14681.1    AJWK01012336    AJWK01012337    AJWK01012338    AJWK01012339    ABLF02023388    ABLF02023392    CVRI01000020    CRK91240.1    AJVK01022424    AJVK01022425    AJVK01022426    KQ434813    KZC06784.1    GL437252    EFN70762.1    JXJN01022027    CP012528    ALC49238.1    EZ424108    ADD20384.1    CCAG010015751    JH431232    CH963925    EDW78369.1    CH916376    EDV95456.1    GDKW01000613    JAI55982.1    ACPB03006860    ACPB03006861    ACPB03006862    ACPB03006863    ACPB03006864    GAHY01000744    JAA76766.1    GECL01002115    JAP04009.1    GBGD01003073    JAC85816.1    KA647908    AFP62537.1    KK854741    PTY18340.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000037510    UP000192223    + More
UP000027135    UP000245037    UP000007266    UP000019118    UP000030742    UP000092461    UP000007819    UP000183832    UP000092462    UP000076502    UP000000311    UP000079169    UP000092460    UP000092553    UP000091820    UP000092443    UP000078200    UP000092444    UP000092445    UP000007798    UP000001070    UP000095300    UP000015103    UP000095301   

PRIDE

H9JR20   

Pfam

PF13639   zf-RING_2        + More
PF00270   DEAD
PF00271   Helicase_C
PF13959   DUF4217
PF03372   Exo_endo_phos
PF01871   AMMECR1

Interpro

IPR001841   Znf_RING        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR000629   RNA-helicase_DEAD-box_CS       
IPR014001   Helicase_ATP-bd       
IPR001650   Helicase_C       
IPR027417   P-loop_NTPase       
IPR025313   DUF4217       
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR023473   AMMECR1       
IPR036071   AMMECR1_dom_sf       
IPR027485   AMMECR1_N       
IPR002733   AMMECR1_domain       

SUPFAM

SSF52540   SSF52540        + More
SSF56219   SSF56219       
SSF143447   SSF143447       

Gene 3D

3.30.40.10     3.60.10.10     3.30.700.20    

CDD

cd00079  HELICc

ProteinModelPortal

H9JR20   A0A2H1VE40   A0A2W1BUQ9   A0A0N1IQ93   A0A212EIZ5   S4PPA0   + More
A0A194PUP8   A0A0L7LUL6   A0A1Y1KBN5   A0A0T6BEV6   A0A1W4XIS8   A0A067QUD5   A0A2P8YQD5   A0A139WLS8   A0A139WLL0   A0A1B6HT03   A0A1B6GG46   A0A1B6E449   U5EPP5   N6TE24   U4U153   A0A2S2Q6Z9   A0A1L8DT74   A0A2S2PS00   A0A1L8DSX8   A0A2H8TL37   A0A1B0CHG3   J9JQM0   A0A1J1HT52   A0A1B0D1W4   A0A154P607   E2A730   A0A3Q0J3P4   A0A1B0BX14   A0A0M4EU63   A0A1A9WA59   A0A1A9XXZ3   A0A1A9UM66   D3TRQ6   A0A1B0G5S1   T1INZ4   A0A1A9Z8J0   B4N1Y0   B4JXI0   A0A1I8NU93   A0A0P4VS91   R4FPR6   A0A0V0G7T8   A0A069DQ67   T1PJ18   A0A2R7WH39  

KEGG

101746515    K10694 E3 ubiquitin-protein ligase ZNRF1/2 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ZNRF

GO

GO:0016874   GO:0004386   GO:0005524   GO:0003723   GO:0016021  

PANTHER

PTHR13016  

Length:

134

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.42474

Exp number, first 60 AAs:

0.16144

Total prob of N-in:

0.26746

outside

1  -  134

 

 

Pi

217.613558

Theta

187.533658

Tajima's D

0.504745

CLR

0.082517

CSRT

0.512374381280936

Interpretation

Uncertain