Gene

KWMTBOMO06360

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_ZNRF2_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr11(-):5664214-5668847      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.927

CDS

ATGCCACAATTCATCATTACGAGCGTAGTTGTGGCAGTAATAGATTGGACGGCAGTGAGGAGTGCAGATACAGCTCTGATTACCCATTTGCTAGACTGTATAAAATGTCCGGTGTGCAGCAAGTTCGTTTTACCGGACGACATAGAGTGCCATCTCGTAATGTGCCTGACGAGGCCACGTCTATCTTATAATGAGGATGTTCTGAGCGACTCGAAAGGCGAATGTGTAATATGCCTCGAGGAGCTGTCCGCGGGCGACACTATCGCCCGTCTGCCGTGCCTCTGCATCTATCATAAAGGGTGCATAGATCAATGGTTCGAAGTGAACAGGTCGTGTCCGGAGCACCCCGGCGACTAG

Protein

MPQFIITSVVVAVIDWTAVRSADTALITHLLDCIKCPVCSKFVLPDDIECHLVMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCPEHPGD

Uniprot

A0A1E1W2T7   A0A2H1VBZ0   A0A2W1C0S4   A0A2A4J580   A0A1E1WH97   A0A212FCL5   + More
B4I042   B3MQW2   A0A3S2TD43   B3NXW8   Q9W3V3   A0A1W4V8J8   A0A194PWJ4   S4PSB3   B4N1Y0   A0A0M4EU63   I4DRP4   B4PZ90   B4JXI0   B4GWJ3   A0A336LL75   B5DLQ9   B4M6Z0   B4L514   A0A2M3ZHP8   A0A182FM83   A0A1B6HT03   A0A1B6GG46   A0A0K8ULX7   A0A0A1WNA2   A0A2M4AGF0   W5JT05   A0A1B6LHI6   E2C866   A0A158NFS5   A0A034VVL6   A0A026VX94   V9ILY9   A0A139WLS8   A0A0M9A337   E2A730   E9IE25   A0A088ADJ3   A0A1B6DSI8   A0A2M4CMV9   A0A0L7QJZ8   A0A139WLL0   T1DIY2   A0A0V0G7T8   A0A1B6E449   A0A182N0R2   A0A182Q3X8   N6TE24   G4XH80   A0A1Q3EU75   A0A0A1WNG9   A0A023EHU5   T1E346   A0A0K8UZA9   W8B361   A0A034VZ49   A0A0P5WMR8   A0A0P6FA57   A0A0K8SJE8   A0A0P4VS91   R4FPR6   A0A182IRL3   A0A0A9XYK3   U4U153   A0A069DQ67   A0A1A9UM66   D3TRQ6   A0A2M4AIQ8   A0A1A9Z8J0   A0A161TEL2   A0A1I8NU93   T1PJ18   A0A2A3EMZ1   U5EPP5   A0A146LSM3   A0A1L8DSX8   A0A084W170   A0A182VKN5   A0A182UEI6   Q7PG08   A0A232FBR8   K7J322   A0A0L0BV05   A0A023F9C8   A0A2S2Q6Z9   E9FQL9   A0A1B0CHG3   A0A1L8DT74   A0A0A9Y1P9   A0A2H8TL37   A0A2S2PS00   J9JQM0   R4WJF7   Q16UL1   A0A023GFZ6  

Pubmed

28756777    22118469    17994087    10731132    12537568    12537572    + More
12537573    12537574    16110336    17569856    17569867    26109357    26109356    26354079    23622113    22651552    17550304    15632085    23185243    25830018    20920257    23761445    20798317    21347285    25348373    24508170    30249741    18362917    19820115    21282665    24330624    23537049    24945155    24495485    27129103    25401762    26334808    20353571    25315136    26823975    24438588    12364791    14747013    17210077    28648823    20075255    26108605    25474469    21292972    23691247    17510324   

EMBL

GDQN01009767    JAT81287.1    ODYU01001744    SOQ38359.1    KZ149897    PZC78710.1    + More
NWSH01002921    PCG67297.1    GDQN01004767    JAT86287.1    AGBW02009181    OWR51457.1    CH480819    EDW52873.1    CH902622    EDV34167.1    RSAL01000318    RVE42573.1    CH954180    EDV47419.1    AE014298    AAF46210.2    ACZ95218.2    KQ459590    KPI97129.1    GAIX01000085    JAA92475.1    CH963925    EDW78369.1    CP012528    ALC49238.1    AK405212    BAM20584.1    CM000162    EDX01057.1    CH916376    EDV95456.1    CH479194    EDW27077.1    UFQS01000048    UFQT01000048    SSW98588.1    SSX18974.1    CH379063    EDY72461.1    KRT06314.1    CH940653    EDW62557.1    CH933811    EDW06273.1    GGFM01007292    MBW28043.1    GECU01029925    JAS77781.1    GECZ01008727    GECZ01008388    JAS61042.1    JAS61381.1    GDHF01028041    GDHF01024959    JAI24273.1    JAI27355.1    GBXI01014302    JAC99989.1    GGFK01006528    MBW39849.1    ADMH02000534    ETN66065.1    GEBQ01016888    JAT23089.1    GL453568    EFN75869.1    ADTU01001536    GAKP01011581    GAKP01011579    JAC47371.1    KK107847    QOIP01000005    EZA47479.1    RLU23046.1    JR051525    AEY61511.1    KQ971319    KYB28900.1    KQ435775    KOX74943.1    GL437252    EFN70762.1    GL762556    EFZ21154.1    GEDC01008658    JAS28640.1    GGFL01002353    MBW66531.1    KQ415041    KOC58890.1    KYB28899.1    GALA01000671    JAA94181.1    GECL01002115    JAP04009.1    GEDC01005876    GEDC01004610    JAS31422.1    JAS32688.1    AXCN02001397    APGK01033087    KB740860    ENN78604.1    JF811435    AEP43784.1    GFDL01016185    JAV18860.1    GBXI01013930    GBXI01008916    JAD00362.1    JAD05376.1    GAPW01005153    JAC08445.1    GALA01000700    JAA94152.1    GDHF01029641    GDHF01020644    JAI22673.1    JAI31670.1    GAMC01018835    GAMC01018834    GAMC01018833    GAMC01018832    JAB87721.1    GAKP01011584    GAKP01011583    GAKP01011582    GAKP01011580    JAC47372.1    GDIP01096813    JAM06902.1    GDIQ01052326    JAN42411.1    GBRD01012917    GBRD01012916    JAG52910.1    GDKW01000613    JAI55982.1    ACPB03006860    ACPB03006861    ACPB03006862    ACPB03006863    ACPB03006864    GAHY01000744    JAA76766.1    GBHO01027289    GBHO01019666    GBHO01017526    GBHO01017523    GBHO01014654    GBHO01014650    GBHO01002834    GBHO01002831    GBRD01012914    JAG16315.1    JAG23938.1    JAG26078.1    JAG26081.1    JAG28950.1    JAG28954.1    JAG40770.1    JAG40773.1    JAG52912.1    KB631777    ERL86023.1    GBGD01003073    JAC85816.1    EZ424108    ADD20384.1    GGFK01007340    MBW40661.1    GEMB01001258    JAS01892.1    KA647908    AFP62537.1    KZ288206    PBC33060.1    GANO01000092    JAB59779.1    GDHC01010340    GDHC01009209    JAQ08289.1    JAQ09420.1    GFDF01004515    JAV09569.1    ATLV01019213    ATLV01019214    KE525264    KFB43964.1    AAAB01008846    EAA45114.5    EAU77281.2    NNAY01000519    OXU27889.1    JRES01001295    KNC23833.1    GBBI01000727    JAC17985.1    GGMS01004322    MBY73525.1    GL732523    EFX90007.1    AJWK01012336    AJWK01012337    AJWK01012338    AJWK01012339    GFDF01004514    JAV09570.1    GBHO01017520    JAG26084.1    GFXV01002876    MBW14681.1    GGMR01019546    MBY32165.1    ABLF02023388    ABLF02023392    AK417665    BAN20880.1    CH477620    EAT38203.1    GBBM01002619    JAC32799.1   

Proteomes

UP000218220    UP000007151    UP000001292    UP000007801    UP000283053    UP000008711    + More
UP000000803    UP000192221    UP000053268    UP000007798    UP000092553    UP000002282    UP000001070    UP000008744    UP000001819    UP000008792    UP000009192    UP000069272    UP000000673    UP000008237    UP000005205    UP000053097    UP000279307    UP000007266    UP000053105    UP000000311    UP000005203    UP000053825    UP000075884    UP000075886    UP000019118    UP000015103    UP000075880    UP000030742    UP000078200    UP000092445    UP000095300    UP000095301    UP000242457    UP000030765    UP000075903    UP000075902    UP000007062    UP000215335    UP000002358    UP000037069    UP000000305    UP000092461    UP000007819    UP000008820   

PRIDE

Q9W3V3   

Pfam

PF13639   zf-RING_2

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR001841   Znf_RING       

Gene 3D

3.30.40.10    

ProteinModelPortal

A0A1E1W2T7   A0A2H1VBZ0   A0A2W1C0S4   A0A2A4J580   A0A1E1WH97   A0A212FCL5   + More
B4I042   B3MQW2   A0A3S2TD43   B3NXW8   Q9W3V3   A0A1W4V8J8   A0A194PWJ4   S4PSB3   B4N1Y0   A0A0M4EU63   I4DRP4   B4PZ90   B4JXI0   B4GWJ3   A0A336LL75   B5DLQ9   B4M6Z0   B4L514   A0A2M3ZHP8   A0A182FM83   A0A1B6HT03   A0A1B6GG46   A0A0K8ULX7   A0A0A1WNA2   A0A2M4AGF0   W5JT05   A0A1B6LHI6   E2C866   A0A158NFS5   A0A034VVL6   A0A026VX94   V9ILY9   A0A139WLS8   A0A0M9A337   E2A730   E9IE25   A0A088ADJ3   A0A1B6DSI8   A0A2M4CMV9   A0A0L7QJZ8   A0A139WLL0   T1DIY2   A0A0V0G7T8   A0A1B6E449   A0A182N0R2   A0A182Q3X8   N6TE24   G4XH80   A0A1Q3EU75   A0A0A1WNG9   A0A023EHU5   T1E346   A0A0K8UZA9   W8B361   A0A034VZ49   A0A0P5WMR8   A0A0P6FA57   A0A0K8SJE8   A0A0P4VS91   R4FPR6   A0A182IRL3   A0A0A9XYK3   U4U153   A0A069DQ67   A0A1A9UM66   D3TRQ6   A0A2M4AIQ8   A0A1A9Z8J0   A0A161TEL2   A0A1I8NU93   T1PJ18   A0A2A3EMZ1   U5EPP5   A0A146LSM3   A0A1L8DSX8   A0A084W170   A0A182VKN5   A0A182UEI6   Q7PG08   A0A232FBR8   K7J322   A0A0L0BV05   A0A023F9C8   A0A2S2Q6Z9   E9FQL9   A0A1B0CHG3   A0A1L8DT74   A0A0A9Y1P9   A0A2H8TL37   A0A2S2PS00   J9JQM0   R4WJF7   Q16UL1   A0A023GFZ6  

PDB

5YWR     E-value=1.09499e-30,     Score=326

KEGG

101746515    K10694 E3 ubiquitin-protein ligase ZNRF1/2 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ZNRF

GO

GO:0016567   GO:0004842   GO:0008270   GO:0016874   GO:0004499   GO:0005515   GO:0003824   GO:0009982   GO:0006744   GO:0016627   GO:0030145   GO:0015923   GO:0005634   GO:0006260  

SignalP

Position:   1 - 21,         Likelihood:  0.837975

 

 

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.20778

Exp number, first 60 AAs:

0.20778

Total prob of N-in:

0.09952

outside

1  -  118

 

 

Pi

289.358323

Theta

179.346504

Tajima's D

1.837778

CLR

0.448293

CSRT

0.858657067146643

Interpretation

Uncertain