Gene
KWMTBOMO06356
Annotation
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
Location in the cell
Mitochondrial Reliability : 1.121 Nuclear Reliability : 1.655 PlasmaMembrane Reliability : 1.053
Sequence
CDS
ATGGATCTGTACACTAAGTTACAAGAGGTGGAATCAAGCGTTGTGCAGAGGATGACTGAGTTTGAAGCAATGCTGAGCAGTCACCAGTCACCACACACGGACCTAGGCAAGTTGTCACAAGATTTCATCGCATTCCGGAATCTCACACTACAAACACTCAACATGCTGAGGTCACAGATGGAGCTTGTTCTCTTGGGGTTGGACAGGCATGAGATGGCGTCGCGTCGTAAGGTCCTTCTGTTTCATGGAATCCCGGAGTCAGATGCCACAGACCCAGCAACAGCAATTGTGGGTATATTAACCAACCAAATGAAGGTGGCTGGTTGCACAGAAGAGGACTTAACTGCTTGCTATCGGTTAGGCTCCAACACCAATAAGCCTAGGCCTATATTAGTCAGGTTCATGAGTTTGAGGCGATGCAATGAAGTGTGGAAGAACAAGACACTCCTGAAGGGTTCTAGGGTCATCATTTCAGAATTTCTGACCAAATCACGTCATGATGTCTTTTTGGAGGCCCGCTCTCATTTCGGCGTTAAGCGCTGCTGGACAACAGATGGGAAAATAATCGTCCTTCTCCCGGATAATAAACGCAGTAAGATTGAACAGATGTTTGAACTTCAGCATCTGAAAACCAAGTTTCCCTCGGCTCAAAAAGCGCAAGGAGCTCCTCAGTCATCTGGGAAATCTCATGACGAACCCAAGACGGCACCAAAATCAGCGGCAGAGCGAGAAATCGGCAAGAGGACGACTCGTCGAAAGTACTTCAAGGGTATAGGCGTGGAGCGATTGCGGGCTGACGCGAGGAATGTTGACTGGTCGACTGTCTTCGGCTCTGACACGATCGATGACATGTCTGGTTTCCGCCAAGGCCACAGCACGGTCACTGCATTGCTCAAGGTCACTGACGACATTCGCCACGCGATTGATGTGGGGCAGCTAACCGTGTTGACCTTATTGGACTTCAGCAGTGCTTTTAACTCAGTAGACTTTGACATCCTTCTAAGTATCCTTGGATCTCTTAATGTATCTCCACTTGCCCTAACCTGGTTTGAATCTTATCTCCGGGGACGCTCGCAGTGTGTCCGTTCTGATGATGCTACTTCAAAATGGTGTGATTTAACTGCGGGTGTACCTCAAGGTGGCGTACTATCCCCTCTCCTTTTCTCTATTTTCATTAATGAAATTACTCAGGTGCTGACTTCTCACTACCATCTCTACGCTGACGATTTGCAGATTTATAGACATTTTAAAGCTGATGACGTTGCTCTAGCTATTGCTGAAATCAATGGAGATCTTGGTAGAATTAGTGCTTGGGCTAAATCTTTTGGACTTCTTGTGAATCCATCAAAATCACAGGTCATAGTAATTGGTAGTTCCTATAGGTACAACACGATTGACCACATTAATTTGCCCCCTGTGACGCTAGATGGAATTCCAATCGCTTATTCTAAAACAGCAAAAAACCTAGGTATCGTTCTTGATTGTCATCTCTCTTGGTCCAGTCAGATAAACTTAGTTAGCAGGAAAGTGCATTGCACGTTTCAGTCTCTCAAGCGTCTTCAGCGTTTCTTGCCCTTTGAAGCTAAAGTCACCCTGGCCCAATCCCTTATGCTTCCTCTCCTTGACTATGCAGATGTCTGTTTCCTGGACGCCGCGGAGGGGCTGTGGGACAAACTGGAAAGGTTACAAAATTTATGCATACGCTTTATTTTTGGTTTACGCAAATATGATCATGTCTCGCAGTACAGATCACAACTTAATTGGTTACCTATCCGACTTCGCCGTGATGTACATGTTTTATGTATGCTGTTCAACATCCTTAATAACCCAGCTGTTCCCCGGTACCTCCGTGAGCGCTTCGAGTACCAGATGCCCCGAGGTGTACCCTGTCGTACAAGTAGATCCCTTCTCCTTAATTTTCCCCCTCACTCCTCCAGCCGCTACGGCGGTTCGTTCACTGTGCAGTCTGTGCGTCTGTGGAACTCAGTTCCACACTCAATCCGTGCAAGTCCCTCACTTGAGGTATTCAGGAAGGCATTAAAGAAGCACTATCTATCTATTTAG
Protein
MDLYTKLQEVESSVVQRMTEFEAMLSSHQSPHTDLGKLSQDFIAFRNLTLQTLNMLRSQMELVLLGLDRHEMASRRKVLLFHGIPESDATDPATAIVGILTNQMKVAGCTEEDLTACYRLGSNTNKPRPILVRFMSLRRCNEVWKNKTLLKGSRVIISEFLTKSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHDEPKTAPKSAAEREIGKRTTRRKYFKGIGVERLRADARNVDWSTVFGSDTIDDMSGFRQGHSTVTALLKVTDDIRHAIDVGQLTVLTLLDFSSAFNSVDFDILLSILGSLNVSPLALTWFESYLRGRSQCVRSDDATSKWCDLTAGVPQGGVLSPLLFSIFINEITQVLTSHYHLYADDLQIYRHFKADDVALAIAEINGDLGRISAWAKSFGLLVNPSKSQVIVIGSSYRYNTIDHINLPPVTLDGIPIAYSKTAKNLGIVLDCHLSWSSQINLVSRKVHCTFQSLKRLQRFLPFEAKVTLAQSLMLPLLDYADVCFLDAAEGLWDKLERLQNLCIRFIFGLRKYDHVSQYRSQLNWLPIRLRRDVHVLCMLFNILNNPAVPRYLRERFEYQMPRGVPCRTSRSLLLNFPPHSSSRYGGSFTVQSVRLWNSVPHSIRASPSLEVFRKALKKHYLSI
Summary
Uniprot
ProteinModelPortal
PDB
5IRG
E-value=0.000250898,
Score=108
Ontologies
KEGG
GO
Topology
Length:
687
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11952
Exp number, first 60 AAs:
0.0005
Total prob of N-in:
0.00109
outside
1 - 687
Population Genetic Test Statistics
Pi
24.897677
Theta
189.882917
Tajima's D
0
CLR
0.002177
CSRT
0.366131693415329
Interpretation
Uncertain
