SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06354  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011983
Annotation
PREDICTED:_alanine_aminotransferase_1_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 1.971 Mitochondrial   Reliability : 1.878
 

Sequence

CDS
ATGTCACAGTTAAAGTTGATAAGCCGCGTTAGTCGCGTTTTATCCGGTGCGGTGAAACGTTCAGAGTTATTCGAAATTAACAAAGTAAACACGAACAACGCAAGAACGATGGCATCCAAAGGCTTGACTGTGGAAAACATGAATCCCAACATTGTCAAGTTGGAATACGCTGTGCGCGGGCCCCTTGTCATTCGCGCTGGCGAGATTGAAAAAGAACTTGAGAAGGGCGCACAGAAACCTTTCAAGCGAGTGATCAAGGCGAATATCGGAGATGCCCATGCCATGGGACAGAAGCCTATCACTTTCATCAGACAGGTAATGGCGTGCCTGGCCCTCCCCGACCTCATCGAGAAGGGAATCTTTCCAGAGGATGTGAAACAGAGAGCCCGAGAGATTTTGGATGCTTGTGGGGGCGGCTCCGTGGGCTCGTACACGGCGTCGCACGGCATCGAACTGGTGCGGCGCCGCGTGGCCGACTACATTCAGCGCCGGGACGGACACCCCGCGCACTGGGAGGACATCTTCCTCTCCTCCGGGGCCTCCACCGCCATCAAGAACTGCCTGCAGCTGTTCTGCAACGATCTGGGAGGAAAAACTTCAGGAGTCATGATCCCCATCCCGCAGTACCCGCTGTACTCGGCCTCGCTGGCGGAGTACGGCCTGGCGCAGGTCGGCTACTACCTCGACGAGGAGCACCACTGGGGGCTGGACCTCCGCGAGCTGGAGAGGTCCCTCGCCGAGGCCAGCGCCACTTGCAACGTCAGGGCCCTGGTCGTCATCAACCCCGGGAACCCGACAGGACAGGTGCTGACCCGAGACAACATCGAGTCGATCATAAAGTTCGCGAAGAAGCACGGTCTGTTCTTGTTCGCGGACGAGGTGTACCAGGACAACGTGTACGCCGCCGGGAGCAAGTTCCACTCGTTTAAGAAGGTGCTGGTGGAGCTTGGCGACGACTACAAGGACGTGGAGCTGGCGTCGTTCATGTCGGTCAGCAAGGGGTACATGGGCGAGTGCGGCGCGCGCGGCGGCTGGGCGGAGCTACGCGGCGTGAACGCGGCCGTGCGGGCGCAGCTCTACAAGTGCATCAGCGCCATGCTGTGCCCCAACGTGCTGGGACAGGCCGCCATCGACTGCGTGGCGCGGCCCCCGCAGCCCGGCGAGCCCTCCTACGAGCTGTACATCAAGGAGAAGACGGACGTGCTGGACTCGCTGAAGAAACGCGCCGAGATGATAGTGGACGCCTTCAACCAGATGCAGGGCTTCAAGTGTAACGTCGTGCAGGGCGCAATGTATGCCTTCCCGCGCTTCGAGCTGCCCCCCCGCGCCGTGGCCGCCGCCGCCGCCGCCGGCATCCCCCCCGACACCTTCTACGCCTTCAGGCTGCTCGAGGAAACCGGTATCTGCATAGTGCCGGGCAGCGGGTTCGGGCAGCGGCCGGGTACCTACCACTTCAGGACCACCATCCTGCCGCAGCCGGAACTGCTGCGAGAGATGCTGGACATCTTCAAGAAGTTCCACCAGAAGTTCACAGCCGAGTACTCGGGCTAG
Protein
MSQLKLISRVSRVLSGAVKRSELFEINKVNTNNARTMASKGLTVENMNPNIVKLEYAVRGPLVIRAGEIEKELEKGAQKPFKRVIKANIGDAHAMGQKPITFIRQVMACLALPDLIEKGIFPEDVKQRAREILDACGGGSVGSYTASHGIELVRRRVADYIQRRDGHPAHWEDIFLSSGASTAIKNCLQLFCNDLGGKTSGVMIPIPQYPLYSASLAEYGLAQVGYYLDEEHHWGLDLRELERSLAEASATCNVRALVVINPGNPTGQVLTRDNIESIIKFAKKHGLFLFADEVYQDNVYAAGSKFHSFKKVLVELGDDYKDVELASFMSVSKGYMGECGARGGWAELRGVNAAVRAQLYKCISAMLCPNVLGQAAIDCVARPPQPGEPSYELYIKEKTDVLDSLKKRAEMIVDAFNQMQGFKCNVVQGAMYAFPRFELPPRAVAAAAAAGIPPDTFYAFRLLEETGICIVPGSGFGQRPGTYHFRTTILPQPELLREMLDIFKKFHQKFTAEYSG

Summary

EMBL
BABH01028649    NWSH01000529    PCG75862.1    KZ149897    PZC78720.1    KQ459692    + More
KPJ20449.1    KQ459590    KPI97123.1    PZC78719.1    PCG75865.1    NWSH01001287    PCG71843.1    PCG71842.1    AGBW02009553    OWR50530.1    AGBW02008780    OWR52566.1    LC260181    BBA45753.1    KC223169    AQT27072.1    KU932367    APA34003.1    PCG75861.1    KJ000066    AHW58022.1    GBHO01033266    GBRD01003195    GDHC01004408    JAG10338.1    JAG62626.1    JAQ14221.1    APGK01033055    KB740860    KB632287    ENN78579.1    ERL91463.1    LJIJ01000113    ODN02389.1    ATLV01023392    KE525342    KFB49063.1    GEDC01024415    JAS12883.1    ABLF02024379    NEVH01006580    PNF37605.1    GECZ01030202    GECZ01029764    GECZ01016955    JAS39567.1    JAS40005.1    JAS52814.1    JXUM01086158    JXUM01086159    JXUM01086160    JXUM01086161    APCN01004914    AAAB01008963    EAA12069.5    GFDF01001216    JAV12868.1    GFDF01001215    JAV12869.1    GAMD01000702    JAB00889.1    FX983741    BAX07240.1    UFQS01000956    UFQT01000956    SSX07936.1    SSX28170.1    GGFJ01003603    MBW52744.1    GANO01002941    JAB56930.1    GGFM01001347    MBW22098.1    AGBW02007655    OWR54812.1    GGFJ01003602    MBW52743.1    CVRI01000020    CRK91319.1    CH477620    EAT38206.1    GGFL01001180    MBW65358.1    GGFK01004238    MBW37559.1    AXCN02001440    GBGD01001314    JAC87575.1    DS232354    DS232797    EDS40556.1    EDS45787.1    GAIX01004250    JAA88310.1    ACPB03001903    ADMH02001203    ETN63742.1    GDKW01001133    JAI55462.1    GGFK01003945    MBW37266.1    GGFK01003981    MBW37302.1    GGFK01004571    MBW37892.1    KJ802126    AJP75146.1    KK852999    KDR12685.1    DS235815    EEB17528.1    GDRN01096602    JAI59315.1    GFDL01007661    JAV27384.1    GBBI01002423    JAC16289.1    GBBK01002316    JAC22166.1    JOJR01000216    RCN41944.1    GFPF01005853    MAA16999.1    LC260183    BBA45755.1    GGLE01002427    MBY06553.1    KQ434857    KZC08802.1    MWRG01001106    PRD34734.1    GDIQ01207604    JAK44121.1    GDIQ01011648    JAN83089.1    GDIP01213839    GDIP01212938    GDIP01153627    GDIP01152835    GDIP01151035    GDIQ01241843    GDIP01142443    GDIP01140034    GDIP01135294    GDIP01134053    GDIP01134050    JAJ09563.1    JAK09882.1    GDIP01222729    GDIP01163691    GDIP01151097    GDIP01151036    GDIP01148493    GDIQ01244393    GDIQ01243194    GDIQ01240391    GDIQ01187358    GDIP01140036    GDIP01140035    GDIP01140032    GDIP01139091    GDIP01134051    GDIP01131548    JAJ74909.1    JAK07332.1    IAAA01005953    LAA00217.1    GACK01007887    JAA57147.1    GEFH01003615    JAP64966.1    GDIP01139094    JAL64620.1    GDIQ01188810    JAK62915.1    GDIP01222728    GDIP01213838    GDIP01212937    GDIP01151037    GDIP01148494    GDIP01148491    GDIQ01244394    GDIQ01243196    GDIQ01240449    GDIQ01225401    GDIQ01190412    GDIP01142442    GDIP01140033    GDIP01139093    GDIP01139092    GDIP01135293    GDIQ01037497    JAK07331.1    JAL64622.1    GDIP01213840    GDIP01212940    GDIP01212939    GDIP01148492    GDIQ01243195    GDIQ01241842    GDIQ01224508    GDIP01142444    GDIP01142390    GDIP01135292    GDIP01135291    GDIP01134052    JAK08530.1    JAL68423.1    GDIP01139095    GDIP01139090    JAL64619.1    GDIP01212123    GDIP01131547    JAL72167.1    GBBM01003720    JAC31698.1    GDIQ01203005    JAK48720.1    GEDV01001809    JAP86748.1    GDIQ01240448    JAK11277.1    IAAA01005955    LAA00223.1    GFAC01003646    JAT95542.1    GDIQ01204752    JAK46973.1    GL732612    EFX71233.1    GDIP01185426    GDIP01185425    JAJ37977.1    IAAA01005954    LAA00220.1    LC260182    BBA45754.1   
Pfam
PF00155   Aminotran_1_2        + More
PF12409   P5-ATPase
Interpro
IPR015422   PyrdxlP-dep_Trfase_dom1        + More
IPR015424   PyrdxlP-dep_Trfase       
IPR004839   Aminotransferase_I/II       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR001757   P_typ_ATPase       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR006544   P-type_TPase_V       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR023214   HAD_sf       
IPR036412   HAD-like_sf       
IPR018303   ATPase_P-typ_P_site       
SUPFAM
SSF53383   SSF53383        + More
SSF81653   SSF81653       
SSF56784   SSF56784       
SSF81665   SSF81665       
PDB
3IHJ     E-value=5.43143e-154,     Score=1397

Ontologies

Topology

Length:
516
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01726
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00172
outside
1  -  516
 
 

Population Genetic Test Statistics

Pi
232.43457
Theta
168.922276
Tajima's D
1.200001
CLR
0.021797
CSRT
0.714714264286786
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
31250652 GGVSLAALAEGLALADRAGLSQADLLDVLALTPLASPHLILKGRAMIESSYSTHQPLTHMQKDLKLALGLGDALEQSLPLTATTNEIFKHAKRLGYANHDVAAVYIRARF 100.00 5e-45
31250652 SEPGWSINEECFKILLPFK 100.00 2e-09
28556443 EMLDIFK 100.00 5e-09
28556443 DGHPAHWEDIFLSSGASTANK 100.00 5e-09
28556443 AVAAAAAAGIPPDTFYAFR 95.24 1e-08
28556443 CNVVQGAMYAFPR 95.24 1e-08
31250652 QVMACLALPDLIEK 100.00 5e-08
26822097 TTIIPQPEIIR 100.00 9e-07
26280517 AMGIAPDIPEDIYYIIKK 100.00 9e-07
25044914 ANIGDAHAMGQK 100.00 9e-07
27102218 EMIDIFKK 100.00 9e-07
28467696 ANIDPICAGK 100.00 9e-07
28556443 NCLQLFCNDLGGK 100.00 9e-07
28556443 HGLFLFADEVYQDNVYAAGSK 100.00 1e-06
28556443 GSVGSYTASHGIELVR 100.00 1e-05
28556443 AEMIVDAFNQMQGFK 100.00 1e-05
26822097 AVAAAAAAGIPPDTFYAFR 100.00 5e-05
26280517 RAEEAADFDGTR 100.00 5e-05
25044914 RAEIVSAEVAK 100.00 5e-05
27102218 KHGIFIFADEVYQDNVYAAGSK 100.00 5e-05
28467696 RAEIVSAEVAK 100.00 5e-05
28556443 LLEETGICIVPGSGFGQR 100.00 5e-05
28556443 LALPDLIEK 100.00 2e-04
26822097 IIEETGICIVPGSGFGQR 100.00 3e-04
26280517 AEMAPVTVK 100.00 3e-04
27102218 RVADYIQR 100.00 3e-04
28467696 AEITCHDNKDGTVSVSYIPTAPGEYK 100.00 3e-04
28556443 VNGVVLDSCTK 100.00 3e-04
28556443 GGWAELR 100.00 4e-04
28556443 SLAEASATCNVR 100.00 5e-04
28556443 SLAEASATCNVR 100.00 5e-04
31250652 QVMACLALPDLIEKGIFPEDVK 100.00 0.002
26822097 ANIGDAHAMGQKPITFIR 100.00 0.004
25044914 CNVPIVIMNSFNTDEDTQK 100.00 0.004
27102218 RAEMIVDAFNQMQGFK 100.00 0.004
28556443 AVAAAAAAGIPPDTFYAFR 100.00 0.004
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号