Gene

KWMTBOMO06352

Pre Gene Modal

BGIBMGA011911

Annotation

hypothetical_protein_KGM_17495_[Danaus_plexippus]

Location

Bomo_Chr11(+):5202437-5214721      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.846

CDS

ATGGCAGCGGCGTGGTGGGTGTGCGTGTGGGCGGGCGGGCTCTGGGCTGCGGCCGGGTGGCGCGGCGCCGCGGGCGGCTGCGGCGTGGCGGAGTTCGCTTGCCGCGCCGGTCCCTGCGTCCGACTGGACGCGTATTGCGACGGCGAGCCGCAGTGCGCGGACGGCAGCGACGAGCCACCGCACTGTACACCCTGCAACCGCACCTACTACGGTCGCGCCGGCGTCGCGTACTCGCTGGCCGTCCGAGGGCCCCCGCGCGCTCCCTTCCTGTGCCACCTCACGTTCACGGCGGGCGGCGGAGCACACGGCGACCTCGTGCAGCTGGCTTTCGACGAATTCCGCGTCGGGCGCTACGAGCCCGCCGCGCTGGACGGCTGCCCCGACGGCTACATGCAGGTGTCGGAGCTCGGCCGCCCCTTCACCGGCGGTTCGTGGTGCGGCGAGGCGGACGGCGCCGCCCTCTACTACAGCGAGACGGCGACGGTCACCGTCTCGGTCAAGTTGTTCCGGGTGCGGCTCGGCGAGGCGTTCGGCTTTCGGTTGCGGTACAAGTTCCTGGCGCAGCGCGAGGCGGTGGTTCGGTTCGGTGCTCTGGAAGCTCCACTGGAGCGCGGTGCCGTATCTCCAGGAACGTACTGCACGCGCACCTACGAGGAGTGTCACCGCAAGGCGTGCCGACTACAAAGTCCTAACTATCCTGGCATGTACCCCAGAAACGTTACCTGCTACTGGAGCCTCCGACAAAAAGACATCCCAACGTGCAAACACGCGATGATTTCTGTTCGACAGGAGTACTCCCACAAAATGCAAATCAAACGGTCGATATCGATGGCGAGTCTCAACAAGACCGGCCGAGCGGTGAGGGCGTGGCGTGAATGTACCGGGGAGCGGGACAGACTCATCTTCTACGACGGCGCTACTACGGACGACCCCGTGCTGGTGGAGTACTGCGGCGGGGACTGGTTGCCGCGTGTCACCTCGCGGGGTCCAGAGATGCTGGTCGCTTTCCACTCGTCCCCGTTCAGCGCTCCACTGCGACCCGCCGCCCCGGCCGCCCCACTCAGAGGATTCGAACTGGACGTAGACGTCGTATTTGCCGATTCTGATTCACTCGACTACGCCAGGGAGTCCAGACGTTGTGAATTTCACGTGAAAGCATCCTCTTCGGAGGAAGAAACGAATTCGACGGCAGGTCCGGGGGGGCGTGGCCGCCGAGGCCGACTGCGGGCCCCTGCACACACCCTGCCGCCGAACACCACGTGTACTTGGACTTTTCACGGGCGACCAGGTGATCTCGTTTGGATCTATTTCTCGAGTTTCACGCAGTATTCGCTGGTGGAGGCGCGACGCGTCGAGAGCAACGAGCGCGAAGAGGAGAGCAGCACGAGTGCGGTGGCGCTGCGCGCCGCGTGCGCCGTGGAGCTGCGCGTGTGGGACGGCGGCGGCGAGGGCGAGGCGGGCGCGCGCTCCCTGGGACACTACTGCGACGCGCCGCCCTCGCTGTGCGCGCGCGCCTCGCTCGCCAACGCCACCCGCGCCCCCCGCCCCTGCGCGCCGCCCGACGGCTACGTGTCCGCCGCCTCGCTGCTGGCGCTGGCGCTCACCTCACGCCCCGGCACGGCCACGCACCCGCTCACCTTCTCTCTCCACTATGAGTTCGTGGACGCGCGTCTCGAGGGTCTCCCGCTGCCGGACGACGGGAGACGAGCCCGGCCCGCCCCGGAGGAATGCGCGAGGAGGTTGACCGCGCCGGGATCCTTTTCCTCTCCGCGGAACGCACTTTGGTTCGGGCGTGGTGGAGCGCGACGCTTGCGTTGCGTGTATAGATTCGACGGGGAGGGTTCTCGTGTGGTGCTCGACTTGCAGGCGGCCACGTTCGGTCGAGAGCCTCGATGCGCGACGCGGCCTGATCCGGTCACCGGTCGACCGAACTGCGTGCCGGACCAGATAGAATCCCATGATGGGGAAACCGAGGCGGAGGACGGAGGGCCCACTGATTTCGACGGGGACGAGGATGTGCCTTTGCGTGTTCCACATCTGCGTATATTTGAATCCCCGTGGCCCGGTTACAGAGTGCCGGTTGGGTGCATATGTGACAACAGCAGCGCGCCGCTCCGGTTTGACGCGAGCGGCGGCGCGCTGGAGCTGGAGCTGGTGGCGCGCTCGCTGCGGGCGGCCGAGGACCACCGCCACGTGCACTTCCAGGGCTCGTGGTCACGCGAGCAGCCGCGCCTCTGTGCGGCCAGGCGCCGCCTCGCTCCCCCCGGAACGCATTTCCGGCTCGCCTTTCCTTATAGCAATAGGATATCCGAATGCGGAGAGACTCCATTCTTGATGGAGGCGCGCGGGAACAGGTCGGTGTTCCTGCGCGTGTGGGGCGAGGAGATGACGCCATCCGCTCCGGGGACCGAACCTCCGCCCTGTGCAACCAGTAACCGAGTGTTCGTGTACGACGCGCACACCTCCAAGTTGGTGCGCGTGATCTGTCCGGGCGGGTCGGGCGCGGCAGTGCAGGTGTTCACCGAGGAGTGGTGGGGTCGCGGCGGACGGTCGGCAGCGCTGCTGGTAGTGTGGGCGGCGCGCGAGGCTGGCAGCGCGCGGCTGGCCTGGATGGAGGTATGGCGCGCCGGACAGAACGCCAGCTCGTGTGCGCACGCGTGCGGACCGCTGGGCGCATGCATGCCGGGCGCACTCTGGTGCGACGGCGCGGAGGACTGCCCGGGTGGTGCGGACGAGCGGGGTGCGTGCGGGGCGGGAGCGCGGTTGCTAGCGGCGCTGGGCGCAAGCGGCGCGACGGGCGCGGCGGGTGCGGCAGGGGGCGCGCTGCTCTTGCTGGCAGCGCTGCTAGTGCGCCGACGACGACGCGCCGTATCGGACAAGCGGCTGTTGGGTGCGCTGGCGGCAGGAAGACGCCTCACGGAGGAGCTGTTGTACGACGCGTCGCGAGCCTCGTCGACCGCATCCTCCTGA

Protein

MAAAWWVCVWAGGLWAAAGWRGAAGGCGVAEFACRAGPCVRLDAYCDGEPQCADGSDEPPHCTPCNRTYYGRAGVAYSLAVRGPPRAPFLCHLTFTAGGGAHGDLVQLAFDEFRVGRYEPAALDGCPDGYMQVSELGRPFTGGSWCGEADGAALYYSETATVTVSVKLFRVRLGEAFGFRLRYKFLAQREAVVRFGALEAPLERGAVSPGTYCTRTYEECHRKACRLQSPNYPGMYPRNVTCYWSLRQKDIPTCKHAMISVRQEYSHKMQIKRSISMASLNKTGRAVRAWRECTGERDRLIFYDGATTDDPVLVEYCGGDWLPRVTSRGPEMLVAFHSSPFSAPLRPAAPAAPLRGFELDVDVVFADSDSLDYARESRRCEFHVKASSSEEETNSTAGPGGRGRRGRLRAPAHTLPPNTTCTWTFHGRPGDLVWIYFSSFTQYSLVEARRVESNEREEESSTSAVALRAACAVELRVWDGGGEGEAGARSLGHYCDAPPSLCARASLANATRAPRPCAPPDGYVSAASLLALALTSRPGTATHPLTFSLHYEFVDARLEGLPLPDDGRRARPAPEECARRLTAPGSFSSPRNALWFGRGGARRLRCVYRFDGEGSRVVLDLQAATFGREPRCATRPDPVTGRPNCVPDQIESHDGETEAEDGGPTDFDGDEDVPLRVPHLRIFESPWPGYRVPVGCICDNSSAPLRFDASGGALELELVARSLRAAEDHRHVHFQGSWSREQPRLCAARRRLAPPGTHFRLAFPYSNRISECGETPFLMEARGNRSVFLRVWGEEMTPSAPGTEPPPCATSNRVFVYDAHTSKLVRVICPGGSGAAVQVFTEEWWGRGGRSAALLVVWAAREAGSARLAWMEVWRAGQNASSCAHACGPLGACMPGALWCDGAEDCPGGADERGACGAGARLLAALGASGATGAAGAAGGALLLLAALLVRRRRRAVSDKRLLGALAAGRRLTEELLYDASRASSTASS

Uniprot

H9JQV5   A0A212FJW9   A0A3S2TGB2   A0A2H1W6D4   A0A194PWI1   A0A2J7RGS4   + More
A0A067R9X5   D6WXQ1   A0A1W4WIT4   A0A2P8ZKH1   E0W0Y7   U4TZH7   N6TXT2   A0A151IBQ7   A0A2A3ELJ0   K7J771   F4WHN2   A0A195B511   T1H809   A0A088A0Z9   A0A151WIT4   E9IIH7   A0A0C9RAS7   A0A0L7QUP5   E2B1T4   A0A151JW37   A0A0N0U4U8   E2BJM2   A0A158NM50   A0A154PSZ8   A0A026W770   A0A3S2LUX9   A0A2S2PMN9   J9KQ07   A0A212EIH7   J9JL19   A0A194PLZ7   A0A2S2R1E3   A0A151X384   A0A026VZ22   A0A195EFU4   A0A195D421   A0A0L7QU87   D6WXF4   E2AVC0   A0A0M9A387   A0A0C9R3I4   A0A2H1WIR5   H9J773   A0A2A4J7I9   A0A154P0K5   F4WQY5   A0A195BQ69   A0A139WBM9   K7J2P3   E0V9K2   A0A1B0CN39   A0A067R7E6   E0VKW7   A0A088A128   A0A1I8PUT1   A0A158NDI5   A0A195ESW0   A0A194QWE6   A0A1I8PUU9   A0A2A3EN67   B1B558  

Pubmed

19121390    22118469    26354079    24845553    18362917    19820115    + More
29403074    20566863    23537049    20075255    21719571    21282665    20798317    21347285    24508170    30249741    18505883   

EMBL

BABH01028665    BABH01028666    AGBW02008215    OWR54000.1    RSAL01000169    RVE45197.1    + More
ODYU01006496    SOQ48382.1    KQ459590    KPI97119.1    NEVH01003752    PNF40041.1    KK852649    KDR19489.1    KQ971362    EFA08886.1    PYGN01000029    PSN56998.1    DS235863    EEB19292.1    KB631694    KI209438    KI210270    ERL85418.1    ERL96036.1    ERL96221.1    APGK01056598    KB741277    ENN71077.1    KQ978079    KYM97151.1    KZ288215    PBC32588.1    GL888167    EGI66239.1    KQ976604    KYM79365.1    ACPB03006880    ACPB03006881    ACPB03006882    ACPB03006883    KQ983075    KYQ47758.1    GL763491    EFZ19623.1    GBYB01010192    JAG79959.1    KQ414735    KOC62299.1    GL444956    EFN60355.1    KQ981663    KYN38502.1    KQ435821    KOX72482.1    GL448604    EFN84080.1    ADTU01020256    ADTU01020257    KQ435078    KZC14454.1    KK107390    EZA51466.1    RSAL01000196    RVE44555.1    GGMR01018035    MBY30654.1    ABLF02027959    AGBW02014633    OWR41289.1    ABLF02029318    ABLF02029319    ABLF02029320    ABLF02029321    ABLF02029322    ABLF02033880    ABLF02033883    ABLF02033885    ABLF02033887    ABLF02045612    KQ459599    KPI94461.1    GGMS01014616    MBY83819.1    KQ982562    KYQ54863.1    KK107549    QOIP01000010    EZA49053.1    RLU17780.1    KQ978983    KYN26764.1    KQ976881    KYN07633.1    KOC62222.1    KQ971361    EFA07989.2    GL443064    EFN62616.1    KQ435776    KOX74929.1    GBYB01010864    JAG80631.1    ODYU01008937    SOQ52959.1    BABH01013734    NWSH01002522    PCG68087.1    KQ434792    KZC05459.1    GL888275    EGI63498.1    KQ976424    KYM88655.1    KQ971372    KYB25368.1    DS234994    EEB10058.1    AJWK01019761    AJWK01019762    AJWK01019763    KK852687    KDR18394.1    DS235255    EEB14023.1    ADTU01012606    ADTU01012607    ADTU01012608    ADTU01012609    ADTU01012610    ADTU01012611    KQ981993    KYN30969.1    KQ461175    KPJ07891.1    PBC32646.1    AB360591    BAG12564.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053268    UP000235965    UP000027135    + More
UP000007266    UP000192223    UP000245037    UP000009046    UP000030742    UP000019118    UP000078542    UP000242457    UP000002358    UP000007755    UP000078540    UP000015103    UP000005203    UP000075809    UP000053825    UP000000311    UP000078541    UP000053105    UP000008237    UP000005205    UP000076502    UP000053097    UP000007819    UP000279307    UP000078492    UP000218220    UP000092461    UP000095300    UP000053240   

PRIDE

H9JQV5    H9J773    B1B558   

Pfam

PF00057   Ldl_recept_a        + More
PF00431   CUB
PF03178   CPSF_A
PF06047   Nkap_C

Interpro

IPR035914   Sperma_CUB_dom_sf        + More
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR000859   CUB_dom       
IPR023415   LDLR_class-A_CS       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR004871   Cleavage/polyA-sp_fac_asu_C       
IPR009269   NKAP_C       

SUPFAM

SSF49854   SSF49854        + More
SSF57424   SSF57424       
SSF50978   SSF50978       

Gene 3D

2.60.120.290     4.10.400.10     2.130.10.10    

CDD

cd00041  CUB
cd00112  LDLa

ProteinModelPortal

H9JQV5   A0A212FJW9   A0A3S2TGB2   A0A2H1W6D4   A0A194PWI1   A0A2J7RGS4   + More
A0A067R9X5   D6WXQ1   A0A1W4WIT4   A0A2P8ZKH1   E0W0Y7   U4TZH7   N6TXT2   A0A151IBQ7   A0A2A3ELJ0   K7J771   F4WHN2   A0A195B511   T1H809   A0A088A0Z9   A0A151WIT4   E9IIH7   A0A0C9RAS7   A0A0L7QUP5   E2B1T4   A0A151JW37   A0A0N0U4U8   E2BJM2   A0A158NM50   A0A154PSZ8   A0A026W770   A0A3S2LUX9   A0A2S2PMN9   J9KQ07   A0A212EIH7   J9JL19   A0A194PLZ7   A0A2S2R1E3   A0A151X384   A0A026VZ22   A0A195EFU4   A0A195D421   A0A0L7QU87   D6WXF4   E2AVC0   A0A0M9A387   A0A0C9R3I4   A0A2H1WIR5   H9J773   A0A2A4J7I9   A0A154P0K5   F4WQY5   A0A195BQ69   A0A139WBM9   K7J2P3   E0V9K2   A0A1B0CN39   A0A067R7E6   E0VKW7   A0A088A128   A0A1I8PUT1   A0A158NDI5   A0A195ESW0   A0A194QWE6   A0A1I8PUU9   A0A2A3EN67   B1B558  

PDB

6GJE     E-value=0.0153098,     Score=94

KEGG

101739495    no KO assigned | (RefSeq) uncharacterized LOC101739495

GO

GO:0016021   GO:0005886   GO:0005634   GO:0003676   GO:0007219   GO:0003682   GO:0045892   GO:0005515   GO:0005524   GO:0006468   GO:0009982   GO:0006744   GO:0016627   GO:0030145   GO:0015923   GO:0006260  

SignalP

Position:   1 - 24,         Likelihood:  0.972132

 

 

Length:

989

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

34.29275

Exp number, first 60 AAs:

11.87197

Total prob of N-in:

0.57150

POSSIBLE N-term signal

sequence

outside

1  -  927

TMhelix

928  -  950

inside

951  -  989

 

 

Pi

291.866785

Theta

193.267187

Tajima's D

1.398917

CLR

0.219267

CSRT

0.761661916904155

Interpretation

Uncertain