SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06346
Pre Gene Modal
BGIBMGA011908
Annotation
hypothetical_protein_RR46_02544_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.673
 

Sequence

CDS
ATGAGGAAACGTAACATAAAAACGGAAGATCCCGAGCCCTCCACGTCCACTCGAATACAACAAGAACACGACTTGGCGTATTATATTCACGATAGAGTGGAACTGATGCATCAGATTTTCAGCGTCTTAAAACCGAAAGAATTAAAGGCAATGGCTCCGGATTGTGTCAGAAACGTATCTATTGATGATTTACAGGAGCTCTGCACGGAGGAGCTTTTAGGAATCAGTTCGAAACGCCTATTAGCCATCTTGGATGGAGCAGAGCCTCCATCCGACACGGAGTCCTCCAGCAGGTCTCCATCACCACAGCTTGAGACCATATCTCTGGACAGCATATCTTCAGATGAGGAGATACTGAATGAAGATCAACATAAGAAAAAAAAGCACAAACATCATAGAAAGAATTCAAAATTGAGGTTGAAAGATAGAAAGAAACATAAAGGTAAGAAGAGTGAAGATGTGGAGCAGTCTGCAGCCTCTAGAGCGGGACTCACTGTGTTGGAGCTGCTGGAGTTACAGGCGCGAGCCAGGGCTATCCGGGCGCAGCTGCAGCAAGAACGGGAGACAATGGAACATGTGGAAACATCTCAAACGGTGTGCAACTCATCAGACAACGAAGTGGAAATCAAAGAGGAGCCTCCAGAAGTGTTAGTCATCAGTAGCGAGGATGAGAAGCCGGATATCCAAGAGCTACAGAAACATCCAGAACTCGCAAAGAACACTCCAGAAGAAGCAGTCGAGGCGATAGGCGAGTCGCCCGCGCCCCAGGAGTCAGCAGTAGTCACGAAGCGATGCAACGACCTCATTATAAAAGTACCTCAGAAGACGCACACGAGAAAAATCAAACTAAAACGAAACAAAATAACGGCTTCTGTTCAGAGCGAAAGTGTTGCCAGTACAGCGAGCATAAGTGTTGCCACAACCGAGAAACGGAAGAAGAAAAAGAAGAAACGCGACAAGCAAACATACAACATTGACAATGATGAAATTACATTGCAATTGTCGGATTCAGAGAAGATGGACTTGTTACAGGACCTAGAGAAGAAACACGGCGTTGCCAGTGAAACTGATAGTGACAGCTCGGAGGATATGACCAAAGAGGCCAACAACGGCACGGCATTACAAAATGATAAGGTTACTGAGGACGCTTTAGTAAATACAAGTGAGTGTGTCGTGAATGCAGACACAGAATCTTCTGACAAGGGAGAAGGATCAATAGAAGAAGGTGAGATCGTCACTGACAATTGTAAGGATGATACAGAAATTTGTGAATCGGTAGAAAGTGCTGGTGATAGGGTAATAGAAGTTAACGATTTACCTGTGAGCCAAAATAATCCTGAGACTGTGGATTTGAATCAACAACATTCAGAACGTACCCAGCTCAATGACAAACCCAATCTAGTTTACGGGAGCCCTGAGAAAACAGACTCATTATCCACGAATACTGAAGTTGCTAAACAAACACAAGATTCCGAAGAAATTATAGAGGAAACTGTCTGTATATCAGACGATGAAAGCACAAACGATGTAATACAAATTATAGATGAAGTAGAACTGTCTGATGATTCTTGCAGTGAAGTCAGCTTGCTGTCAAAGGAGCCGACAGCCCAGGAAATAGCTGCTTTGTCTGCTAGAATAGATGAAATGGATCAAAACGATGTGGACGATGATGCATCAGAACAACTCCTAATGTCTTGGAAAGACAGATACGTAGAGAGTGCTAAAGTTAAAAAAGTTTTGACCGTGTCGAACATATTTAACGCATTGAGGAAAAAGAATATTGATTTGAAGAAGAAAATACAGGAGTGTGACAAACCCTCCGAAGATGTTGTAGTTGAAAACAAAATTGAAGACGGAACACTCGAGCAATACAATAACCTAGAGAGTACTGCTGGCAAGTTCAGCTCTGAGACCTTAGATAATGTTGTGGTTACCGCCAACATGAAGAAAGATGCTAAAGTCCTATTGAAGATGTACAAAAAGCTTCTGAAATACAACGACATGACACGGGTCAGTAAGAAGAAAAAGAAGAAAGACGTGTGA
Protein
MRKRNIKTEDPEPSTSTRIQQEHDLAYYIHDRVELMHQIFSVLKPKELKAMAPDCVRNVSIDDLQELCTEELLGISSKRLLAILDGAEPPSDTESSSRSPSPQLETISLDSISSDEEILNEDQHKKKKHKHHRKNSKLRLKDRKKHKGKKSEDVEQSAASRAGLTVLELLELQARARAIRAQLQQERETMEHVETSQTVCNSSDNEVEIKEEPPEVLVISSEDEKPDIQELQKHPELAKNTPEEAVEAIGESPAPQESAVVTKRCNDLIIKVPQKTHTRKIKLKRNKITASVQSESVASTASISVATTEKRKKKKKKRDKQTYNIDNDEITLQLSDSEKMDLLQDLEKKHGVASETDSDSSEDMTKEANNGTALQNDKVTEDALVNTSECVVNADTESSDKGEGSIEEGEIVTDNCKDDTEICESVESAGDRVIEVNDLPVSQNNPETVDLNQQHSERTQLNDKPNLVYGSPEKTDSLSTNTEVAKQTQDSEEIIEETVCISDDESTNDVIQIIDEVELSDDSCSEVSLLSKEPTAQEIAALSARIDEMDQNDVDDDASEQLLMSWKDRYVESAKVKKVLTVSNIFNALRKKNIDLKKKIQECDKPSEDVVVENKIEDGTLEQYNNLESTAGKFSSETLDNVVVTANMKKDAKVLLKMYKKLLKYNDMTRVSKKKKKKDV

Summary

Uniprot
Pfam
PF15335   CAAP1
Interpro
IPR038991   CAAP1       
ProteinModelPortal
PDB
5JCS     E-value=0.053429,     Score=88

Ontologies

Topology

Length:
680
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00830999999999999
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00726
outside
1  -  680
 
 

Population Genetic Test Statistics

Pi
189.903883
Theta
181.64232
Tajima's D
-0.413375
CLR
1.518472
CSRT
0.265186740662967
Interpretation
Uncertain
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