Gene

KWMTBOMO06342

Annotation

PREDICTED:_zinc_finger_protein_773-like_[Bombyx_mori]

Location

Bomo_Chr11(-):5066035-5069756      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.346

CDS

ATGACGCCCGCGGTGACCTCGCAGGGAGCCGGCGACAGGCCGCAGTGCGCCGAATGCGGGAAGATGTTCAGCACAGCCAAGACGCACCGCCGCCACATCGACGTGGTGCACCGGGGCCACAACAAGTTCCCGTGCCCGCATTGCGAGCGCGTCTACCGGTGGAACTCCAACCTGCACCGCCACATCCGGAGCCACAAGGCCCGGGAAGCGGACGAGCTGTACTGCGTGACCTGCGACAAGCGATACTCCTCCATAGCCACCTTCAGGCAGCACCTCACCGGCTCCAAGATGCACGTCCCCGTCGAACAGTTCATGTTCGTCTGCGGCGAGTGCGGCAAGAGGTTCGTGAGCAAGACAAATCTTAAGGACCACATCGACTGGGAGCATCTGAAGCGCGTCAAGTTCCGCTGCAAGGTCTGCGACAAGCCGTTCAAGACGCACACGTCGCTCTACCTACACATGCAGAACGTCCACACGCACGAGAGCAGAAAGAAGTCTAACCTGTGCCACGTCTGCGGGAAGAGATACCAGAATTCAGCCAAGTTGAAGTCTCACATAACGGCGCTGCACACCAGCCACACGCCTTACCGCTGCGGGAAATGCAGCGCCGCCTTCTCCTGGCACTCCAGCCTCTACCGGCACCTCAAGGAGATACACCACAAGATAAAGGCGCCGTACGGCGTGAAGAAGACCAAGAAGTCGCCGCAAGTGTTGCCCGCCCCGCCCCCCGCGCCCGCCGCCGACACGTGA

Protein

MTPAVTSQGAGDRPQCAECGKMFSTAKTHRRHIDVVHRGHNKFPCPHCERVYRWNSNLHRHIRSHKAREADELYCVTCDKRYSSIATFRQHLTGSKMHVPVEQFMFVCGECGKRFVSKTNLKDHIDWEHLKRVKFRCKVCDKPFKTHTSLYLHMQNVHTHESRKKSNLCHVCGKRYQNSAKLKSHITALHTSHTPYRCGKCSAAFSWHSSLYRHLKEIHHKIKAPYGVKKTKKSPQVLPAPPPAPAADT

Uniprot

A0A212FHB5   A0A2A4JHV2   A0A2W1BH78   S4NJ07   A0A0N0P9R5   A0A2Z5U886   + More
A0A0N1IAA4   H9JR29   A0A194Q3P5   A0A0N1PI81   A0A194Q537   A0A2A4K4S3   A0A2W1BRP1   A0A0N0PCK0   A0A0N1ICW2   S4P3B4   A0A2H1WLQ9   A0A2A4K6F4   A0A2A4K834   A0A3S2NQN3   A0A194QRA1   A0A0N0PE54   A0A2W1BK83   S4PEZ1   A0A2A4JBW6   A0A3Q3R3T5   A0A3P9M3M7   A0A1I8GPR1   A0A0N1IGS5   S4PJM9   A0A267EE16   A0A212FA07   A0A0N1IE69   A0A194Q4K3   A0A096M6J5   A0A146PGT0   A0A146TSU5   A0A146XCK5   A0A3Q2R2G8   A0A146PF35   A0A0N1ICJ9   A0A146X6V2   A0A3M0J785   A0A3P8SPY1   A0A068XFE9   A0A3P8SQG7   H0WFH5   A0A147AJU6   A0A146XD95   A0A2I4AJK3   F1QM77   A0A3Q2SUM6   A0A3P8SXM2   A0A147AG51   A0A3Q2VKG0   A0A3P9BXT3   A0A212F479   A0A3B5B6M6   H0WEP0   A0A0G2KPN2   A0A3P9N7Z5   A0A3B4GS40   A0A3B5B810   A0A3Q3K0K6   A0A3Q3IA25   A0A0N1IJT5   A0A3Q2NXE7   A0A0X3P1H2   A0A3M0JE90   X1WDD7   A0A3P9HWY2   H2N098   I3ISW0   A0A146NR82   A0A194Q233   A0A3Q2QNA1   A0A146UZ74   A0A061HVB2   H9IWZ4   A0A3P8YAV0   A0A3B5KAX6   A0A3Q0SMX5   A0A212F8F4   G3ICC8   A0A2H1WUB2   A0A0K2SXK7   H0WEK5   F1QLN7   A0A3B5K5L6   A0A3P9KJK1   A0A3S2NV19   A0A3L7H007  

EC Number

2.1.1.-

Pubmed

22118469    28756777    23622113    26354079    19121390    17554307    + More
26392545    23594743    25186727    23929341    25069045    21551351    21804562    29704459   

EMBL

AGBW02008515    OWR53124.1    NWSH01001418    PCG71298.1    KZ150132    PZC73044.1    + More
GAIX01013869    JAA78691.1    KQ459456    KPJ00864.1    AP017511    BBB06830.1    KQ460400    KPJ14982.1    BABH01028686    BABH01028687    KQ459564    KPI99629.1    KQ459920    KPJ19319.1    KQ459463    KPJ00474.1    NWSH01000147    PCG79069.1    KZ149995    PZC75450.1    KQ460555    KPJ14021.1    KQ458486    KPJ05870.1    GAIX01006514    JAA86046.1    ODYU01009516    SOQ54010.1    NWSH01000080    PCG79821.1    PCG79820.1    RSAL01000142    RVE46029.1    KQ461198    KPJ06061.1    KQ459983    KPJ19122.1    PZC75449.1    GAIX01006840    JAA85720.1    NWSH01002068    PCG69256.1    KPJ14980.1    GAIX01004880    JAA87680.1    NIVC01002229    PAA59805.1    AGBW02009535    OWR50564.1    KQ458725    KPJ05352.1    KPJ00468.1    AYCK01019138    GCES01143732    JAQ42590.1    GCES01090423    JAQ95899.1    GCES01046573    JAR39750.1    GCES01143733    JAQ42589.1    KPJ05382.1    GCES01049346    JAR36977.1    QRBI01000179    RMB96130.1    CT027578    GCES01007848    JAR78475.1    GCES01046195    JAR40128.1    CU138541    GCES01008936    JAR77387.1    AGBW02010415    OWR48546.1    BX470115    FP074867    KQ459795    KPJ19918.1    GEEE01019568    JAP43657.1    QRBI01000150    RMB99148.1    CR382385    FP102097    GCES01152023    JAQ34299.1    KPI99627.1    GCES01075910    JAR10413.1    KE689944    ERE48928.1    BABH01021154    AGBW02009729    OWR50026.1    JH001909    EGW14072.1    ODYU01010720    SOQ56004.1    HACA01001152    CDW18513.1    BX649518    RSAL01000063    RVE49479.1    RAZU01001052    RLQ59185.1   

Proteomes

UP000007151    UP000218220    UP000053268    UP000053240    UP000005204    UP000283053    + More
UP000261600    UP000265180    UP000095280    UP000215902    UP000028760    UP000265000    UP000269221    UP000265080    UP000000437    UP000192220    UP000264840    UP000265160    UP000261400    UP000242638    UP000261460    UP000265200    UP000001038    UP000030759    UP000265140    UP000005226    UP000261340    UP000001075    UP000273346   

PRIDE

H9JR29    H9IWZ4    G3ICC8   

Pfam

PF00096   zf-C2H2        + More
PF12171   zf-C2H2_jaz
PF00163   Ribosomal_S4
PF07776   zf-AD
PF05605   zf-Di19
PF16622   zf-C2H2_11
PF00069   Pkinase
PF01352   KRAB

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR022755   Znf_C2H2_jaz       
IPR001912   Ribosomal_S4/S9_N       
IPR012934   Znf_AD       
IPR017114   YY-1-like       
IPR008598   Di19_Zn_binding_dom       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR041697   Znf-C2H2_11       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       
IPR017125   Znf_PRDM5-like       
IPR001909   KRAB       
IPR036051   KRAB_dom_sf       

SUPFAM

SSF57667   SSF57667        + More
SSF56112   SSF56112       
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

A0A212FHB5   A0A2A4JHV2   A0A2W1BH78   S4NJ07   A0A0N0P9R5   A0A2Z5U886   + More
A0A0N1IAA4   H9JR29   A0A194Q3P5   A0A0N1PI81   A0A194Q537   A0A2A4K4S3   A0A2W1BRP1   A0A0N0PCK0   A0A0N1ICW2   S4P3B4   A0A2H1WLQ9   A0A2A4K6F4   A0A2A4K834   A0A3S2NQN3   A0A194QRA1   A0A0N0PE54   A0A2W1BK83   S4PEZ1   A0A2A4JBW6   A0A3Q3R3T5   A0A3P9M3M7   A0A1I8GPR1   A0A0N1IGS5   S4PJM9   A0A267EE16   A0A212FA07   A0A0N1IE69   A0A194Q4K3   A0A096M6J5   A0A146PGT0   A0A146TSU5   A0A146XCK5   A0A3Q2R2G8   A0A146PF35   A0A0N1ICJ9   A0A146X6V2   A0A3M0J785   A0A3P8SPY1   A0A068XFE9   A0A3P8SQG7   H0WFH5   A0A147AJU6   A0A146XD95   A0A2I4AJK3   F1QM77   A0A3Q2SUM6   A0A3P8SXM2   A0A147AG51   A0A3Q2VKG0   A0A3P9BXT3   A0A212F479   A0A3B5B6M6   H0WEP0   A0A0G2KPN2   A0A3P9N7Z5   A0A3B4GS40   A0A3B5B810   A0A3Q3K0K6   A0A3Q3IA25   A0A0N1IJT5   A0A3Q2NXE7   A0A0X3P1H2   A0A3M0JE90   X1WDD7   A0A3P9HWY2   H2N098   I3ISW0   A0A146NR82   A0A194Q233   A0A3Q2QNA1   A0A146UZ74   A0A061HVB2   H9IWZ4   A0A3P8YAV0   A0A3B5KAX6   A0A3Q0SMX5   A0A212F8F4   G3ICC8   A0A2H1WUB2   A0A0K2SXK7   H0WEK5   F1QLN7   A0A3B5K5L6   A0A3P9KJK1   A0A3S2NV19   A0A3L7H007  

PDB

5V3M     E-value=6.67143e-13,     Score=177

KEGG

101740046    no KO assigned | (RefSeq) zinc finger protein 773-like

GO

GO:0003676   GO:0046872   GO:0019843   GO:0005634   GO:0008270   GO:0008168   GO:0000976   GO:0003924   GO:0006470   GO:0006744   GO:0016627   GO:0030145   GO:0015923   GO:0006260  

Length:

249

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04987

outside

1  -  249

 

 

Pi

229.529157

Theta

181.502528

Tajima's D

1.092929

CLR

0

CSRT

0.68211589420529

Interpretation

Uncertain