Gene

KWMTBOMO06341

Pre Gene Modal

BGIBMGA011907

Annotation

PREDICTED:_mitochondrial_ribosome-associated_GTPase_2-like_[Amyelois_transitella]

Location

Bomo_Chr11(+):5057397-5065155      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.55

CDS

ATGCGATTGATTAGACTATTACAAAGATTAAAGGTCACTATAAAAACGCCAAACACAGTGTCGAAACGACCTTACTGTGATAACGTGCCTAAGCCGCTCCGTAGTTTGAAACCCAAGTCTACTAGAGATACAGTTCAGCATTATGTAGATTCCTTTCGCGTTAGGACTGTCGGAGGAAATGGAGGTGACGGCTGCATATCCTTCCTAAGTGTATGGTGTAAAGATCACGCCGGTCCGGACGGTGGCGATGGTGGAAATGGAGGTCATGTCATATTTAAGGCAACAAATTCTGTACGAAGTTTAAATCATTGTAAAGCAGTCATACAAGCGAAGCCCGGAGAGAAAGGATTCAACAAAGACTGCAGCGGCAAGAATGCTGGACACGTCATTGTCAATGTACCAATAGGTACAATAATAAAAAACCAAAATGGTCAAGTGATTGGGGATTTGGACAGGGAGGGGTTGATGTTTGTTGCGGCGCGGGGTGGGGCGGGAGGTAGAGGAAACAAATTTTTCCTCACGGACACAGAACAGGCTCCGGACATAGCAGAGTTCGGGGCTGCAGGCGAAACAAACATTTACCATCTGGAGGTACGCTCACTGGCCCACGTCGGGTTGCTGGGGTTCCCGAATGCCGGGAAGAGCACCGTGCTGAGAGCCATATCGCGCGCGCGGCCCAACGTCGCACCGTATCCCTTCACGACGCTGAAGCCGCACATCGGCACGATACTGTACGACGACTACGAGCAGGTGGCGGTGGCCGACCTCCCGGGGCTGATCCCTGGCTCACACATGAACTACGGCCTGGGTATACAGTTCCTGCAGCACGTGGAGAGGTGCCGAGGGCTGGTTTTCCTGCTGGACGGCAGCTCCTCGCCCGGGGACCAGCTCCGCGTGCTGCGCCGTGAGCTGCGGGGGTACAGCGCCGCACTGGCGCGCCGACCGGCCCTGCTCGTCGTCAACAAGATAGACTTGCCCGAAGCGAAACGCAACTACGAGCTCATGAGGAATGACTACGACAATGTCATCGGCGTGTCGGCCAAGTACGGGGTCAATCTGCAGCAACTGCTGGCCGCCATCAGGGCGATATACGATGAGAATGATTTTCGTGAATAA

Protein

MRLIRLLQRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYVDSFRVRTVGGNGGDGCISFLSVWCKDHAGPDGGDGGNGGHVIFKATNSVRSLNHCKAVIQAKPGEKGFNKDCSGKNAGHVIVNVPIGTIIKNQNGQVIGDLDREGLMFVAARGGAGGRGNKFFLTDTEQAPDIAEFGAAGETNIYHLEVRSLAHVGLLGFPNAGKSTVLRAISRARPNVAPYPFTTLKPHIGTILYDDYEQVAVADLPGLIPGSHMNYGLGIQFLQHVERCRGLVFLLDGSSSPGDQLRVLRRELRGYSAALARRPALLVVNKIDLPEAKRNYELMRNDYDNVIGVSAKYGVNLQQLLAAIRAIYDENDFRE

Uniprot

H9JQV1   A0A2H1VTC3   A0A2A4JFG4   A0A2W1BMY0   A0A194Q2R7   A0A212FH52   + More
A0A0N0PCX9   A0A2Z5U802   A0A1Y1MXP9   A0A084WU95   A0A182J092   A0A2J7QBP4   A0A182SWX4   A0A182GHV5   A0A182UXJ9   A0A182XFS9   A0A182Q309   A0A182Y0K4   A0A182HI64   Q7Q1N7   A0A182TWS2   A0A2M4BQU9   Q17LY1   A0A2M4BQZ1   A0A2M4BQZ5   A0A182NBM9   A0A182K4U4   W5JEN4   A0A2M4ASF7   A0A2M4ASR2   A0A182WGF4   A0A1Q3FWK5   A0A182NZI0   A0A182FWG2   A0A182M0F6   A0A1W4WEB7   A0A2M3ZCW9   A0A2M3ZCW7   A0A182RHE1   A0A1B6MIG7   A0A336LL01   D6WJA7   A0A2P8XQQ0   A0A158NCD8   A0A1B0GJ17   A0A151WSL5   J3JXF1   E9J835   A0A195F8Y2   A0A1B6IV56   A0A151IGS0   B4N149   A0A0V0GC45   F4WWX5   A0A0P4VN80   A0A151JAS2   A0A0A9W2G2   A0A0M4E6B9   A0A0M3QU22   E2A1R7   A0A026VZL6   A0A1B6C4I3   A0A0J7L228   B4GJS9   Q29NY9   A0A3B0KK85   B4LSA0   A0A3B0JVS4   B4NWX5   A0A0M8ZVE9   A0A1J1IMX9   T1I6P3   A0A1L8DZX1   B3MNZ8   B4Q6S0   B4HYJ9   A0A154PQD5   Q8SXX3   Q9VLN0   A0A1W4W999   B3N754   A0A1W4WPB2   A0A2A3E6T6   B4JAK5   W8BRI7   A0A087ZV43   E2BBY2   B0WGD3   B4KE81   A0A034WQN0   A0A0K8VKK5   A0A1B0G2A5   A0A1I8NUV2   A0A2H8TFT0   A0A195BY74   A0A1A9V2B0   E0VL11   A0A1I8M9Q8   K7IQQ9   A0A1A9XVU2  

Pubmed

19121390    28756777    26354079    22118469    28004739    24438588    + More
26483478    25244985    12364791    14747013    17210077    17510324    20920257    23761445    18362917    19820115    29403074    21347285    22516182    23537049    21282665    17994087    21719571    27129103    25401762    20798317    24508170    15632085    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24495485    25348373    20566863    25315136    20075255   

EMBL

BABH01028687    BABH01028688    BABH01028689    BABH01028690    ODYU01004163    SOQ43742.1    + More
NWSH01001784    PCG70142.1    KZ150132    PZC73043.1    KQ459564    KPI99628.1    AGBW02008548    OWR53054.1    KQ460400    KPJ14981.1    AP017511    BBB06831.1    GEZM01020307    JAV89310.1    ATLV01027023    KE525421    KFB53789.1    NEVH01016296    PNF26013.1    JXUM01064962    KQ562323    KXJ76149.1    AXCN02000679    APCN01005628    AAAB01008980    EAA14310.4    GGFJ01006299    MBW55440.1    CH477210    EAT47690.1    GGFJ01006339    MBW55480.1    GGFJ01006301    MBW55442.1    ADMH02001728    ETN61284.1    GGFK01010392    MBW43713.1    GGFK01010492    MBW43813.1    GFDL01003076    JAV31969.1    AXCM01003715    GGFM01005600    MBW26351.1    GGFM01005601    MBW26352.1    GEBQ01004276    JAT35701.1    UFQT01000037    SSX18385.1    KQ971343    EFA04450.2    PYGN01001514    PSN34328.1    ADTU01011819    AJWK01019209    KQ982796    KYQ50615.1    APGK01037326    APGK01037327    BT127920    KB740948    KB632288    AEE62882.1    ENN77298.1    ERL91555.1    GL768788    EFZ11002.1    KQ981727    KYN37065.1    GECU01016976    JAS90730.1    KQ977728    KYN00263.1    CH963920    EDW78139.1    GECL01001186    JAP04938.1    GL888417    EGI61218.1    GDKW01002792    JAI53803.1    KQ979206    KYN22251.1    GBHO01044539    GBRD01011774    JAF99064.1    JAG54050.1    CP012523    ALC39871.1    ALC39879.1    ALC40257.1    GL435766    EFN72740.1    KK107648    EZA48319.1    GEDC01028892    JAS08406.1    LBMM01001317    KMQ96519.1    CH479184    EDW36895.1    CH379058    EAL34504.1    OUUW01000010    SPP86196.1    CH940649    EDW63708.1    SPP86197.1    CM000157    EDW88505.1    KQ435830    KOX71747.1    CVRI01000055    CRL01520.1    ACPB03005118    GFDF01002024    JAV12060.1    CH902620    EDV31164.1    CM000361    CM002910    EDX04229.1    KMY89061.1    CH480818    EDW52129.1    KQ435007    KZC13584.1    AY075526    BT015198    AAL68333.2    AAT94427.1    AE014134    AAF52655.1    CH954177    EDV59350.1    KZ288348    PBC27483.1    CH916368    EDW02791.1    GAMC01010679    JAB95876.1    GL447175    EFN86806.1    DS231925    EDS26892.1    CH933807    EDW11826.1    GAKP01002008    JAC56944.1    GDHF01012926    JAI39388.1    CCAG010004344    GFXV01001095    MBW12900.1    KQ976396    KYM92891.1    DS235263    EEB14067.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000030765    + More
UP000075880    UP000235965    UP000075901    UP000069940    UP000249989    UP000075903    UP000076407    UP000075886    UP000076408    UP000075840    UP000007062    UP000075902    UP000008820    UP000075884    UP000075881    UP000000673    UP000075920    UP000075885    UP000069272    UP000075883    UP000192223    UP000075900    UP000007266    UP000245037    UP000005205    UP000092461    UP000075809    UP000019118    UP000030742    UP000078541    UP000078542    UP000007798    UP000007755    UP000078492    UP000092553    UP000000311    UP000053097    UP000036403    UP000008744    UP000001819    UP000268350    UP000008792    UP000002282    UP000053105    UP000183832    UP000015103    UP000007801    UP000000304    UP000001292    UP000076502    UP000000803    UP000192221    UP000008711    UP000242457    UP000001070    UP000005203    UP000008237    UP000002320    UP000009192    UP000092444    UP000095300    UP000078540    UP000078200    UP000009046    UP000095301    UP000002358    UP000092443   

PRIDE

H9JQV1    Q8SXX3    Q9VLN0   

Pfam

PF01018   GTP1_OBG        + More
PF01926   MMR_HSR1
PF10354   DUF2431

Interpro

IPR014100   GTP-bd_Obg/CgtA        + More
IPR006073   GTP_binding_domain       
IPR036726   GTP1_OBG_dom_sf       
IPR035101   GTP-bd_Obg       
IPR027417   P-loop_NTPase       
IPR031167   G_OBG       
IPR006169   GTP1_OBG_dom       
IPR005225   Small_GTP-bd_dom       
IPR036612   KH_dom_type_1_sf       
IPR029063   SAM-dependent_MTases       
IPR019446   DUF2431       
IPR036690   Fdx_antiC-bd_sf       

SUPFAM

SSF82051   SSF82051        + More
SSF52540   SSF52540       
SSF54791   SSF54791       
SSF53335   SSF53335       
SSF54991   SSF54991       

Gene 3D

2.70.210.12     3.30.1370.10     3.30.70.380    

CDD

cd01898  Obg

ProteinModelPortal

H9JQV1   A0A2H1VTC3   A0A2A4JFG4   A0A2W1BMY0   A0A194Q2R7   A0A212FH52   + More
A0A0N0PCX9   A0A2Z5U802   A0A1Y1MXP9   A0A084WU95   A0A182J092   A0A2J7QBP4   A0A182SWX4   A0A182GHV5   A0A182UXJ9   A0A182XFS9   A0A182Q309   A0A182Y0K4   A0A182HI64   Q7Q1N7   A0A182TWS2   A0A2M4BQU9   Q17LY1   A0A2M4BQZ1   A0A2M4BQZ5   A0A182NBM9   A0A182K4U4   W5JEN4   A0A2M4ASF7   A0A2M4ASR2   A0A182WGF4   A0A1Q3FWK5   A0A182NZI0   A0A182FWG2   A0A182M0F6   A0A1W4WEB7   A0A2M3ZCW9   A0A2M3ZCW7   A0A182RHE1   A0A1B6MIG7   A0A336LL01   D6WJA7   A0A2P8XQQ0   A0A158NCD8   A0A1B0GJ17   A0A151WSL5   J3JXF1   E9J835   A0A195F8Y2   A0A1B6IV56   A0A151IGS0   B4N149   A0A0V0GC45   F4WWX5   A0A0P4VN80   A0A151JAS2   A0A0A9W2G2   A0A0M4E6B9   A0A0M3QU22   E2A1R7   A0A026VZL6   A0A1B6C4I3   A0A0J7L228   B4GJS9   Q29NY9   A0A3B0KK85   B4LSA0   A0A3B0JVS4   B4NWX5   A0A0M8ZVE9   A0A1J1IMX9   T1I6P3   A0A1L8DZX1   B3MNZ8   B4Q6S0   B4HYJ9   A0A154PQD5   Q8SXX3   Q9VLN0   A0A1W4W999   B3N754   A0A1W4WPB2   A0A2A3E6T6   B4JAK5   W8BRI7   A0A087ZV43   E2BBY2   B0WGD3   B4KE81   A0A034WQN0   A0A0K8VKK5   A0A1B0G2A5   A0A1I8NUV2   A0A2H8TFT0   A0A195BY74   A0A1A9V2B0   E0VL11   A0A1I8M9Q8   K7IQQ9   A0A1A9XVU2  

PDB

1LNZ     E-value=6.93744e-44,     Score=446

KEGG

101735907    K03979 GTPase [EC:3.6.5.-] | (RefSeq) mitochondrial ribosome-associated GTPase 2

GO

GO:0005525   GO:0000287   GO:0003924   GO:0003723   GO:0006470   GO:0006744   GO:0016627   GO:0030145   GO:0015923   GO:0005634   GO:0006260  

Length:

371

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01561

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.00786

outside

1  -  371

 

 

Pi

226.46773

Theta

173.943061

Tajima's D

1.609709

CLR

0

CSRT

0.804909754512274

Interpretation

Uncertain