SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06338
Pre Gene Modal
BGIBMGA011905
Annotation
PREDICTED:_zinc_finger_protein_287-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.384
 

Sequence

CDS
ATGGCATTGGATTCCTTTAATAACCTACGGCGGTCATTATGCGGAGGCTGTTTGAGTTCAGATAGGAAATTATCAGAAACCAATTATGAATACAAACATTTATTTGGTGAACTCGTCGGATCCACTAATCAGAGTGCGCACACTAGCCTATGTTGGGAATGTATTAAGAAACTAAAAAATATTCGAGATTTCAAAGGACAAGCAAGGAAAGCACAAGATCAGCTACTCCAATTAGTTAAGGATCCGTTGTTCACTTTATCAAAGTTGAAATTCAGTAAAACAGACAACATAGATGTATTGGCAATTAAACGTAACAATAAATTAATTTCAAAGGATAATAAATTGATAGCAAATAAGAAAAGAGCTCTATCGCATCACAACGGACCAGAAATCACGTCAGCTTTTGGATCTGTCAATCCAGATTCAAGTTTTTTGGAAATTAATACATTTGACTGTCATGACGGAGATGACAGTACAAATTCAAAAGTACCTGTTCACAGTAATGATGATGAGGGTAATGAAACAAAACCTCTTGCTTTTATCAAAGTAGAATATTCGGATAGTGAAAATATATTGAGTGAATTTGCCGATGAAGGCTTGACGAATGATGGTGCTAATGCGGTAACAAAAGCGAAATGTAATAAGGTCAGATCAAAGAGACGCAACAGGACAGCAGATGAGTTTGATGAGTCTGATGATGAGCCCCTCACTAAGAAGAGTCGTTCAAAAACAGATACGGTGGCACCGAAATTGGACCGGAGAAAGAACCCGGGCCCGAAACGCGAGAAGCCGCCGGGTGTTGTCAACAACAGCCGCGTGAGGAAGAAGCTGGAGCAGCTCAACGTGCGCGCCGACCTGTTGGAGATGGTCGTGCTGTCCTGGGAGGAGTAA
Protein
MALDSFNNLRRSLCGGCLSSDRKLSETNYEYKHLFGELVGSTNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKLIANKKRALSHHNGPEITSAFGSVNPDSSFLEINTFDCHDGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDSENILSEFADEGLTNDGANAVTKAKCNKVRSKRRNRTADEFDESDDEPLTKKSRSKTDTVAPKLDRRKNPGPKREKPPGVVNNSRVRKKLEQLNVRADLLEMVVLSWEE

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR013087   Znf_C2H2_type        + More
IPR012934   Znf_AD       
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
296
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01665
outside
1  -  296
 
 

Population Genetic Test Statistics

Pi
222.380739
Theta
162.525524
Tajima's D
1.155378
CLR
0
CSRT
0.702864856757162
Interpretation
Uncertain
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