Gene

KWMTBOMO06328  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011994

Annotation

PREDICTED:_uncharacterized_protein_LOC101736794_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr11(-):4847905-4851572      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.418

CDS

ATGTCCATATTAGTTGAAAATAATTTGATTAAGAATGAAAATGAAGATATTTTTGAACAGAAATCTCATTATATACCTTGTAAGATTGAACAGGATGGTTCTGCTAACGTAAAGAAATATTTTGACCCTTACATCGTAGAAAACAATTCACAAGAACTATCGGCAACGTTTCGGGGGCATCCTCTTGACGGTACACAGATCACATTTCCGGAGGGCTACCGAGCTGTTTTAGTAACTGAGACGAAGAGACCTTTAACTGAAGATGCTGAAAGAAAATTCCAGGTGACAGGGGGCTTCAAGAACTTCACGTATTGGAATTGGGATAAGAAACCATCGAAGAACGATGATTTATGTAAAGCCATGGACTGGATCGAGATTGCGGAAGCGATACATGGCGATTGA

Protein

MSILVENNLIKNENEDIFEQKSHYIPCKIEQDGSANVKKYFDPYIVENNSQELSATFRGHPLDGTQITFPEGYRAVLVTETKRPLTEDAERKFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIHGD

Uniprot

H9JR34   A0A2A4J4U3   A0A2W1BNF4   A0A1E1WQT5   S4P124   A0A2H1VFB1   + More
A0A194QAG9   A0A0N1IJM4   A0A212FJ91   A0A067QMW0   A0A2P8Z0Q5   S6D9N1   A0A182K807   A0A182QPT2   A0A182FVK7   A0A154NXL5   A0A1B6HDY5   A0A088ALL9   A0A1B6FH49   A0A2A3EA68   A0A0J7KYI5   A0A182WDB8   A0A0N0U582   A0A1Q3F0L3   B0WD66   A0A1S4H636   Q7QHL8   A0A182VDJ6   W5JDN4   Q16TF0   A0A182LHI6   N6UI62   A0A0T6BA77   A0A1B6L5D9   A0A182HG17   A0A182YE90   A0A2M4D013   A0A023EE88   A0A182SMB2   A0A182MP76   A0A084VEW9   A0A087T488   A0A158NBN0   A0A182IRE6   A0A195C8A0   D6WFV5   A0A182RXM5   A0A151WL26   E1ZVE6   A0A1B6CQE6   A0A0L7QMF6   A0A182MXG2   A0A3R7MK99   A0A195BGA7   R4FLX4   A0A195FCE3   E9ICU9   E2BC34   A0A195DR37   A0A1S3IH94   A0A1S3DDM6   A0A182P356   A0A224XPS9   A0A026VY43   A0A369SDK9   B3S0Q4   A0A0L0BTS4   A0A023F7A2   H3APD2   V4ABP5   C3XZI2   A0A0N8CJ98   A0A3M6UH74   A0A2B4SCW5   A0A1W4V1E4   B4GIB8   A0A0L8GI73   B3MIF8   Q28Z36   B4MIS3   E9QD20   A1ZAW6   Q8IGW9   A0A1Y1N9A1   A0A1B0CN67   A0A0P7VM56   C1BM66   A0A336LYF9   B4HMX9   A0A0J9RGH9   B4QBA8   A0A3B5KA71   A0A3B0JNY6   A0A0N8DKE6   A0A1Y1N7E7   A0A0A9W6F0   A0A0E9X3U3   A7T538   W5K0X1   A0A1L8GJX5  

Pubmed

19121390    28756777    23622113    26354079    22118469    24845553    + More
29403074    23938757    12364791    20920257    23761445    17510324    20966253    23537049    25244985    24945155    26483478    24438588    21347285    18362917    19820115    20798317    21282665    24508170    30249741    30042472    18719581    26108605    25474469    9215903    23254933    18563158    30382153    17994087    15632085    23594743    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28004739    22936249    21551351    25401762    26823975    25613341    17615350    25329095    27762356   

EMBL

BABH01028710    NWSH01003385    PCG66412.1    KZ150008    PZC75155.1    GDQN01001767    + More
JAT89287.1    GAIX01009086    JAA83474.1    ODYU01002269    SOQ39528.1    KQ459463    KPJ00411.1    KQ459894    KPJ19533.1    AGBW02008309    OWR53779.1    KK853149    KDR10639.1    PYGN01000252    PSN50087.1    HF586479    CCQ71378.1    AXCN02001700    KQ434778    KZC04321.1    GECU01034864    JAS72842.1    GECZ01020269    JAS49500.1    KZ288324    PBC28076.1    LBMM01001902    KMQ95577.1    KQ435794    KOX73728.1    GFDL01014017    JAV21028.1    DS231894    EDS44244.1    AAAB01008816    EAA05041.3    ADMH02001680    ETN61448.1    CH477650    EAT37803.1    APGK01034495    APGK01034496    KB740914    KB632005    ENN78342.1    ERL87925.1    LJIG01002694    KRT84246.1    GEBQ01021263    JAT18714.1    APCN01005461    GGFL01006270    MBW70448.1    JXUM01016951    GAPW01005665    KQ560470    JAC07933.1    KXJ82252.1    AXCM01007145    ATLV01012340    KE524783    KFB36513.1    KK113348    KFM59927.1    ADTU01011228    KQ978219    KYM96396.1    KQ971328    EEZ99790.1    KQ982981    KYQ48546.1    GL434492    EFN74856.1    GEDC01021549    JAS15749.1    KQ414889    KOC59828.1    QCYY01001313    ROT78952.1    KQ976500    KYM83244.1    ACPB03006689    GAHY01001949    JAA75561.1    KQ981673    KYN38305.1    GL762401    EFZ21604.1    GL447247    EFN86759.1    KQ980581    KYN15333.1    GFTR01001929    JAW14497.1    KK107638    QOIP01000004    EZA48391.1    RLU23212.1    NOWV01000021    RDD44889.1    DS985246    EDV23685.1    JRES01001352    KNC23378.1    GBBI01001600    JAC17112.1    AFYH01090605    AFYH01090606    KB201847    ESO94237.1    GG666475    EEN66503.1    GDIP01126263    LRGB01000079    JAL77451.1    KZS21140.1    RCHS01001529    RMX53013.1    LSMT01000115    PFX26939.1    CH479183    EDW36238.1    KQ421721    KOF76696.1    CH902619    EDV37006.1    CM000071    EAL25779.2    CH963719    EDW72012.1    CR626866    AE013599    AAM68481.1    BT001550    AAN71305.1    GEZM01014240    JAV92167.1    AJWK01019865    JARO02000899    KPP77079.1    BT075695    ACO10119.1    UFQT01000301    SSX23012.1    CH480816    EDW48329.1    CM002911    KMY94634.1    CM000362    EDX07532.1    OUUW01000001    SPP75046.1    GDIP01025079    JAM78636.1    GEZM01014241    JAV92166.1    GBHO01040230    GBRD01014331    GDHC01002011    GDHC01001643    JAG03374.1    JAG51495.1    JAQ16618.1    JAQ16986.1    GBXM01011338    JAH97239.1    DS471047    EDO28923.1    CM004472    OCT84142.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000027135    + More
UP000245037    UP000075881    UP000075886    UP000069272    UP000076502    UP000005203    UP000242457    UP000036403    UP000075920    UP000053105    UP000002320    UP000007062    UP000075903    UP000000673    UP000008820    UP000075882    UP000019118    UP000030742    UP000075840    UP000076408    UP000069940    UP000249989    UP000075901    UP000075883    UP000030765    UP000054359    UP000005205    UP000075880    UP000078542    UP000007266    UP000075900    UP000075809    UP000000311    UP000053825    UP000075884    UP000283509    UP000078540    UP000015103    UP000078541    UP000008237    UP000078492    UP000085678    UP000079169    UP000075885    UP000053097    UP000279307    UP000253843    UP000009022    UP000037069    UP000008672    UP000030746    UP000001554    UP000076858    UP000275408    UP000225706    UP000192221    UP000008744    UP000053454    UP000007801    UP000001819    UP000007798    UP000000437    UP000000803    UP000092461    UP000034805    UP000192224    UP000001292    UP000000304    UP000005226    UP000268350    UP000001593    UP000018467    UP000186698   

PRIDE

H9JR34    A1ZAW6    Q8IGW9   

Pfam

PF08615   RNase_H2_suC        + More
PF00168   C2
PF07002   Copine

Interpro

IPR013924   RNase_H2_suC        + More
IPR010734   Copine       
IPR035892   C2_domain_sf       
IPR000008   C2_dom       
IPR036465   vWFA_dom_sf       
IPR037768   C2B_Copine       

SUPFAM

SSF53300   SSF53300       

Gene 3D

2.60.40.150    

CDD

cd09271  RNase_H2-C
cd04047  C2B_Copine

ProteinModelPortal

H9JR34   A0A2A4J4U3   A0A2W1BNF4   A0A1E1WQT5   S4P124   A0A2H1VFB1   + More
A0A194QAG9   A0A0N1IJM4   A0A212FJ91   A0A067QMW0   A0A2P8Z0Q5   S6D9N1   A0A182K807   A0A182QPT2   A0A182FVK7   A0A154NXL5   A0A1B6HDY5   A0A088ALL9   A0A1B6FH49   A0A2A3EA68   A0A0J7KYI5   A0A182WDB8   A0A0N0U582   A0A1Q3F0L3   B0WD66   A0A1S4H636   Q7QHL8   A0A182VDJ6   W5JDN4   Q16TF0   A0A182LHI6   N6UI62   A0A0T6BA77   A0A1B6L5D9   A0A182HG17   A0A182YE90   A0A2M4D013   A0A023EE88   A0A182SMB2   A0A182MP76   A0A084VEW9   A0A087T488   A0A158NBN0   A0A182IRE6   A0A195C8A0   D6WFV5   A0A182RXM5   A0A151WL26   E1ZVE6   A0A1B6CQE6   A0A0L7QMF6   A0A182MXG2   A0A3R7MK99   A0A195BGA7   R4FLX4   A0A195FCE3   E9ICU9   E2BC34   A0A195DR37   A0A1S3IH94   A0A1S3DDM6   A0A182P356   A0A224XPS9   A0A026VY43   A0A369SDK9   B3S0Q4   A0A0L0BTS4   A0A023F7A2   H3APD2   V4ABP5   C3XZI2   A0A0N8CJ98   A0A3M6UH74   A0A2B4SCW5   A0A1W4V1E4   B4GIB8   A0A0L8GI73   B3MIF8   Q28Z36   B4MIS3   E9QD20   A1ZAW6   Q8IGW9   A0A1Y1N9A1   A0A1B0CN67   A0A0P7VM56   C1BM66   A0A336LYF9   B4HMX9   A0A0J9RGH9   B4QBA8   A0A3B5KA71   A0A3B0JNY6   A0A0N8DKE6   A0A1Y1N7E7   A0A0A9W6F0   A0A0E9X3U3   A7T538   W5K0X1   A0A1L8GJX5  

PDB

3P5J     E-value=1.34275e-11,     Score=161

KEGG

101736794    K10745 ribonuclease H2 subunit C | (RefSeq) uncharacterized LOC101736794

PATHWAY

03030    DNA replication - Bombyx mori (domestic silkworm)

GO

GO:0006401   GO:0032299   GO:0046872   GO:0004659   GO:0006744   GO:0016627   GO:0030145   GO:0015923   GO:0005634   GO:0006260  

Length:

133

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07485

outside

1  -  133

 

 

Pi

15.396828

Theta

15.160777

Tajima's D

0.12576

CLR

0.724172

CSRT

0.421178941052947

Interpretation

Uncertain