Gene

KWMTBOMO06319

Pre Gene Modal

BGIBMGA011892

Annotation

PREDICTED:_transmembrane_protein_26_[Bombyx_mori]

Location

Bomo_Chr11(+):4727993-4732527      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.569

CDS

ATGTGGGTCACTGTCATCGAGCAGTTTCTGATGTTGACCCTCATTGTCGGGAGGTGGCTGCTGCCTAAGGGCGACCTGACCAGGGACCAGCTAAGTCAACTTCTCCTGGTCTACATAGGCACGGCTGCGGACATCATAGAGTTTTTCGACTCCTTCAAAGACGAGAAGGTGGCCTCCGAGAAACTCCTCGTTCTGCTCACCCTTGGCATTTGGTCGTGGTCCCTGGTGCAGTTCACCGTCGTCCTAACCGCCACAAAGTCCAGGAAGTCCCGCGGAGCAGGCAATAGGTCCGACATGAACAGCCGCGCTTGTTGCTGCACGATCGAGGTGTGCGCCATCATGATGAACATAGCTCTCCAGGACGCGCCCTTCCTGGTCTTCAGACTCCTCATAATATGCTACTACAAAATAATCAACTACATGAATATATTCTTCACCTGCAAGAACACGTTGGTCATCTTACTGCAGATGTACAGGCTATACGTGTTGCATTTGGAGATTGTTGACGACAACAATGGCGGCTCCGTGTACAGGAAGTCGGGGAGGCAGCATCACAAGAGCCGGGAGAGGAAGCCGAAGGGAGGCGGAAGAAGGTGA

Protein

MWVTVIEQFLMLTLIVGRWLLPKGDLTRDQLSQLLLVYIGTAADIIEFFDSFKDEKVASEKLLVLLTLGIWSWSLVQFTVVLTATKSRKSRGAGNRSDMNSRACCCTIEVCAIMMNIALQDAPFLVFRLLIICYYKIINYMNIFFTCKNTLVILLQMYRLYVLHLEIVDDNNGGSVYRKSGRQHHKSRERKPKGGGRR

Uniprot

H9JQT6   A0A2H1VXA3   A0A2W1BBF3   A0A0N1IFQ7   A0A3S2TIS4   A0A194Q4Y5   + More
A0A212FD57   A0A2A4JPM0   D6WN33   A0A1W4W5S7   A0A182FNZ4   Q17BX0   A0A067QVS2   A0A182GZT8   A0A182YHH0   A0A182SXY4   A0A1A9ZA15   A0A182LUQ9   A0A182X0A0   A0A182VWL4   Q7PYR7   A0A182PFJ8   A0A232EX89   A0A182LR23   A0A182N5U4   A0A182HZY9   B0XKB0   B0X2U3   A0A182V2R9   E2BUL9   A0A310SP19   A0A151IE08   K7IMP2   A0A1B0BVV5   A0A158NSX3   A0A0L7RAT5   A0A087ZP18   A0A151XH34   A0A2A3ENE4   A0A2P8Z526   A0A195ESK0   A0A2J7QG94   A0A0M8ZXW4   A0A154PA88   B4N934   A0A0L0BKW3   W5JGE6   B4LYJ6   B4ICM3   B4K8P0   A0A1B0DH39   A0A3B0K6U9   B4PSG0   B3P670   Q9VBE7   B4G5Z2   A0A1I8MZP6   A0A1W4VKK4   B4JTL8   Q29AH4   A0A182JI60   B3M0I6   A0A336M1F4   A0A1I8PIK3   A0A336LYU1   A0A084VAG1   A0A0M4EPE7   B4QW55   A0A182H523   A0A3L8DU77   A0A026X2F4   A0A182TYW0   A0A1D2NBU7   A0A162RFH8   A0A182Q733   A0A182RC37   E9GXS5   A0A0P5BWS9   A0A1A9XRF6   A0A0P5DUS7   A0A0P5CP70   A0A0P5AYF4   A0A0P4YNM8   A0A0P6CCP7   A0A0P5YFP1   A0A0P5A3G1   A0A0P4YWG0   A0A0P6HYZ2   A0A0P5YUU9   A0A0P5PK59   A0A1J1IR81   A0A0P6EMU8   A0A226EQ56   A0A2C9JGQ2   A0A1A9UFP5   V3ZCL5   V4BNN2   A0A2C9K6N9   A0A1S3JPY4   R7UHY6  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
17510324    24845553    26483478    25244985    12364791    14747013    17210077    28648823    20966253    20798317    20075255    21347285    29403074    17994087    26108605    20920257    23761445    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25315136    15632085    24438588    30249741    24508170    27289101    21292972    15562597    23254933   

EMBL

BABH01028727    BABH01028728    BABH01028729    BABH01028730    ODYU01004842    SOQ45132.1    + More
KZ150163    PZC72679.1    KQ460971    KPJ10121.1    RSAL01000109    RVE47173.1    KQ459463    KPJ00419.1    AGBW02009112    OWR51653.1    NWSH01000953    PCG73393.1    KQ971343    EFA04344.2    CH477315    EAT43783.1    KK853191    KDR10031.1    JXUM01002200    JXUM01002201    AXCM01006418    AAAB01008987    EAA01045.4    NNAY01001761    OXU22996.1    APCN01002023    APCN01002024    DS233765    EDS31509.1    DS232299    EDS39417.1    GL450730    EFN80606.1    KQ762329    OAD55959.1    KQ977901    KYM98911.1    JXJN01021495    ADTU01025234    ADTU01025235    ADTU01025236    ADTU01025237    ADTU01025238    ADTU01025239    ADTU01025240    ADTU01025241    ADTU01025242    ADTU01025243    KQ414618    KOC67953.1    KQ982138    KYQ59713.1    KZ288204    PBC33285.1    PYGN01000191    PSN51605.1    KQ981989    KYN31146.1    NEVH01014835    PNF27592.1    KQ435798    KOX73360.1    KQ434857    KZC08819.1    CH964232    EDW81581.1    JRES01001712    KNC20563.1    ADMH02001287    ETN63161.1    CH940650    EDW68016.1    CH480828    EDW45119.1    CH933806    EDW15459.1    AJVK01060681    OUUW01000005    SPP81356.1    CM000160    EDW98622.1    CH954182    EDV53540.1    AE014297    AAF56595.1    CH479179    EDW23924.1    CH916374    EDV91447.1    CM000070    EAL27376.2    CH902617    EDV44233.1    UFQT01000289    SSX22829.1    UFQS01000316    UFQT01000316    SSX02781.1    SSX23152.1    ATLV01003712    ATLV01003713    KE524159    KFB34955.1    CP012526    ALC47652.1    CM000364    EDX14554.1    JXUM01110793    JXUM01110794    JXUM01110795    KQ565444    KXJ70964.1    QOIP01000004    RLU23723.1    KK107020    EZA62467.1    LJIJ01000098    ODN02711.1    LRGB01000190    KZS20471.1    AXCN02001153    GL732573    EFX75766.1    GDIP01194163    JAJ29239.1    GDIP01168316    JAJ55086.1    GDIP01167426    JAJ55976.1    GDIP01192464    JAJ30938.1    GDIP01226215    JAI97186.1    GDIP01017508    JAM86207.1    GDIP01059886    JAM43829.1    GDIP01204666    JAJ18736.1    GDIP01226216    JAI97185.1    GDIQ01019926    JAN74811.1    GDIP01052785    JAM50930.1    GDIQ01137608    JAL14118.1    CVRI01000057    CRL02060.1    GDIQ01073987    JAN20750.1    LNIX01000002    OXA58951.1    KB202620    ESO88818.1    KB202408    ESO90479.1    AMQN01001274    KB300949    ELU06154.1   

Proteomes

UP000005204    UP000053240    UP000283053    UP000053268    UP000007151    UP000218220    + More
UP000007266    UP000192223    UP000069272    UP000008820    UP000027135    UP000069940    UP000076408    UP000075901    UP000092445    UP000075883    UP000076407    UP000075920    UP000007062    UP000075885    UP000215335    UP000075882    UP000075884    UP000075840    UP000002320    UP000075903    UP000008237    UP000078542    UP000002358    UP000092460    UP000005205    UP000053825    UP000005203    UP000075809    UP000242457    UP000245037    UP000078541    UP000235965    UP000053105    UP000076502    UP000007798    UP000037069    UP000000673    UP000008792    UP000001292    UP000009192    UP000092462    UP000268350    UP000002282    UP000008711    UP000000803    UP000008744    UP000095301    UP000192221    UP000001070    UP000001819    UP000075880    UP000007801    UP000095300    UP000030765    UP000092553    UP000000304    UP000249989    UP000279307    UP000053097    UP000075902    UP000094527    UP000076858    UP000075886    UP000075900    UP000000305    UP000092443    UP000183832    UP000198287    UP000076420    UP000078200    UP000030746    UP000085678    UP000014760   

PRIDE

H9JQT6    Q9VBE7   

Pfam

PF09772   Tmem26        + More
PF00581   Rhodanese
PF00899   ThiF
PF14705   Costars

Interpro

IPR019169   Transmembrane_26        + More
IPR036873   Rhodanese-like_dom_sf       
IPR001763   Rhodanese-like_dom       
IPR035985   Ubiquitin-activating_enz       
IPR000594   ThiF_NAD_FAD-bd       
IPR038095   Costars_sf       
IPR027817   Costars_dom       
IPR001711   PLipase_C_Pinositol-sp_Y       

SUPFAM

SSF69572   SSF69572       

Gene 3D

3.40.250.10     1.10.10.1540    

ProteinModelPortal

H9JQT6   A0A2H1VXA3   A0A2W1BBF3   A0A0N1IFQ7   A0A3S2TIS4   A0A194Q4Y5   + More
A0A212FD57   A0A2A4JPM0   D6WN33   A0A1W4W5S7   A0A182FNZ4   Q17BX0   A0A067QVS2   A0A182GZT8   A0A182YHH0   A0A182SXY4   A0A1A9ZA15   A0A182LUQ9   A0A182X0A0   A0A182VWL4   Q7PYR7   A0A182PFJ8   A0A232EX89   A0A182LR23   A0A182N5U4   A0A182HZY9   B0XKB0   B0X2U3   A0A182V2R9   E2BUL9   A0A310SP19   A0A151IE08   K7IMP2   A0A1B0BVV5   A0A158NSX3   A0A0L7RAT5   A0A087ZP18   A0A151XH34   A0A2A3ENE4   A0A2P8Z526   A0A195ESK0   A0A2J7QG94   A0A0M8ZXW4   A0A154PA88   B4N934   A0A0L0BKW3   W5JGE6   B4LYJ6   B4ICM3   B4K8P0   A0A1B0DH39   A0A3B0K6U9   B4PSG0   B3P670   Q9VBE7   B4G5Z2   A0A1I8MZP6   A0A1W4VKK4   B4JTL8   Q29AH4   A0A182JI60   B3M0I6   A0A336M1F4   A0A1I8PIK3   A0A336LYU1   A0A084VAG1   A0A0M4EPE7   B4QW55   A0A182H523   A0A3L8DU77   A0A026X2F4   A0A182TYW0   A0A1D2NBU7   A0A162RFH8   A0A182Q733   A0A182RC37   E9GXS5   A0A0P5BWS9   A0A1A9XRF6   A0A0P5DUS7   A0A0P5CP70   A0A0P5AYF4   A0A0P4YNM8   A0A0P6CCP7   A0A0P5YFP1   A0A0P5A3G1   A0A0P4YWG0   A0A0P6HYZ2   A0A0P5YUU9   A0A0P5PK59   A0A1J1IR81   A0A0P6EMU8   A0A226EQ56   A0A2C9JGQ2   A0A1A9UFP5   V3ZCL5   V4BNN2   A0A2C9K6N9   A0A1S3JPY4   R7UHY6  

KEGG

101740998    no KO assigned | (RefSeq) transmembrane protein 26

GO

GO:0016021   GO:0008641   GO:0005524   GO:0016779   GO:0006629   GO:0004435   GO:0035556  

PANTHER

PTHR22168  

Length:

198

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

75.06454

Exp number, first 60 AAs:

26.67953

Total prob of N-in:

0.26143

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  21

inside

22  -  33

TMhelix

34  -  52

outside

53  -  61

TMhelix

62  -  84

inside

85  -  123

TMhelix

124  -  146

outside

147  -  198

 

 

Pi

218.067846

Theta

154.145394

Tajima's D

1.33198

CLR

0

CSRT

0.744312784360782

Interpretation

Uncertain