Gene

KWMTBOMO06316

Pre Gene Modal

BGIBMGA011888

Annotation

PREDICTED:_catenin_alpha_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr11(+):4651873-4679517      View in EpiBrowser

Full name

Catenin alpha      

Location in the cell

Cytoplasmic   Reliability : 1.316 Mitochondrial   Reliability : 1.409

CDS

ATGGCGACTATGACGGATCAGTATGGCACAACAGGTACCTTGTCCCTGAAATGGGATCCTCGCAACTTGGAGATCAGAACCATGTCAGTGGAACGCACACTGGAACCTCTAGTGCTCCAAGTCACTACCCTAGTAAATAACAAAGACCGGGACGCCAAAAAGAAGAGACCTGGCAAGTCAAAGCGTGCGAGCGCATTAGTGGCTACTGTGGAACGAGCCACGGAGATCTTCATAGAACGAGGTCAGACCATAGCCTATGAGAATCCAGAGATCACTCAGCAGATGCTGACGGCTGTCGAAGATGTAAGGAAAGCCGGAGCGACAATGAGCGTCTCGGCTCGCGAGTTCTCGGACCAGCCGTGCGCTTCCTCGGTGCGCTCCGGCATGGTGCGCGCGGCCCGGGGGCTACTGTCCGCCGTCACGCGCCTCCTCATCCTGGCGGACATGGTGGACGTGCATCTGCTGCTGTCCAAGCTCACTGCGGTGGAGCAGGATCTGGACAAGTTAAAGGCTGCGTCGTCCCAGTCGGAGGTGGTGGAGCTGGCGCGGCAGTTCGGCCACTCCGCCGCGCAGCTCTCCGCCGCGGCAGGGAAGCGGCAGAACGAGCTCAAGGAGCCCCGCATGAAGGACGAGCTGGCCGCAGCCCGGGCCGTGCTGAAGAAGCACTCGACGATGTTATTGACAGCCTCTAAGGTGTACGTGCGCCACCCGGAGCTGGCCGCGGCCAAGGCCAACCGCGACTACGTGCTGCGCCAGGTCTGCTGCGCCGTCGACACCATCGCCTCCGTCGCCAAGGGACAGCCACTGCCCGACGGGAGCAGCCGCGCGACAGACGGCCCTGGGGAGCTGGCCCAGGCCCTCGACGACTTCGACGAACGTATGGTCATGGAGCCCTTACAGTATTCGGAGCTGCGCACTCGACCTTCGCTGGAGGAGAGGCTGGAGTCCATCATCTCCGGGGCCGCACTCATGGCCGACAGCTCGTGCACCAGGGACGAGCGGCGCGAGCGCATCGTGGCGGAGTGCAACGCCGTGCGCCAGGCGCTGCAGGACCTGCTGCACGAGTACATGGCCAACGCCGGCAAGAAGGAGCAGTCGTCGGGGCTGGAGCGCGCCATCGAGTCCATGTGCCGCAAGACGCGGGACCTGCGGAGACAGCTGCGCAAGGCGGTGGTGGACCACGTGTCCGACAGTTTCCTGGAGACGAACGTGCCGCTGCTGGTGCTGATGGAGGCGGCTCGGAACGGCAACGAGAAGGAGGTCGAGGAGTACGCCCTCGTGTTCACGGAGCATGCCAACAAACTCGTCGAGGTGGCGAATCTGGTGTGCTCCATGTCGAACAACGAGGACGGTGTGAAGATGGTGCGCCACGCCGCCGACCACATCGAGGCGCTGTGTCCGCAGGTGGTGAACGCGGCGCGCGTGCTGGCGGCGCGGGCCCGCTCGCGCGTGGCGCAGGACAACGCCGCGGCCTTCGCGCACGCCTGGGAGCGCGCCGTGCGTCTGCTCACCGAGGCCGTGGATGACATCACCACCATCGACGACTTCCTCGCCGTCAGCGAGAACCACATCCTCGAGGACGTGAACAAGTGCGTGGTGGCGCTGCAGGAGGGAGACCCCGACTCGCTGGAGAGGACCGCCGGCGCCATCCGGGGGAGGGCCGCCAGGGTATGTTCCGTGGTGACGCAGGAGATGGACAACTACGAGCCCTGCATCTACACCAAGCGCGTGCTGGAGGCGGTCACCGTGCTGCGGGACCAAGTCATGTCCAAGTTCGCGGTGCGCGTGGACGCGGCCGTGTCGGCGCTGGGAGGCGGCGCCGGTGGAGCCCTAGACGAGAACGACTTCATAGACGCGTCTAGACTCGTCTATGACGCCGTCCGGGAGATACGCCGGGCGGTGCTCATGAACCGGGATGAAGAAGATTTGGATCCCGAAGACGTGGATCTAGATGAACAGTATACTCTGGAGACGAGAAGCAAATCGAGCGCTCACACGGGCGAGCACGGAGTCGACGAGTACCCGGACATTAGCGGCATCACTAACGCCAGGGAAGCGATGCGTAAAATGACCGAAGAGGACAAGAGGAAGATCCTGCAGCAAGTCGAGCTGTTCAGGCGCGAGAAGATGTCGTTCGACAACGAGGTCGCCAAGTGGGACGACGCCGGCAACGACATCATCATGCTCGCCAAGCACATGTGCATGATCATGCTCGAGATGACAGACTTCACGAGAGGTCGCGGCCCCCTCAAAACCACCATGGACGTAATCAACGCCGCCAAGAAGATATCCGAAGCCGGAACCAAACTGGATAAGCTGACCAGGGAGATCGCCGAACAGTGTCCCGAATCCTCTACTAAACAAGACTTGCTCGCCTACCTCCAACGGATCGCTCTGTACTGCCACCAGATACAAATAACCAGCAAAGTGAAGGCGGACGTGCAGAACATATCAGGAGAGCTCATCGTGAGCGGGCTGGACAGCGCGACGTCCCTGATCCAGGCGGCCAAGAACCTGATGAATGCGGTCGTGCTCACCGTGAAGGCTTCGTACGTCGCCTCTACCAAGTACACCCGCCAGGGGACCATCGCGTCTCCGATAGTGGTTTGGCGCATGAAGGCCCCCGAGAAGAAGCCCCTCATCAGGCCCGAGAAGCCGGAGGAGGTGAGGGCGAAGGTCCGCCGCGGCAGCCAGAAGAAGCAACCAAGCCCGATCCACGCTCTGGCGGAGTTCCAGAGCCCCGCCGACAGCGTCTAG

Protein

MATMTDQYGTTGTLSLKWDPRNLEIRTMSVERTLEPLVLQVTTLVNNKDRDAKKKRPGKSKRASALVATVERATEIFIERGQTIAYENPEITQQMLTAVEDVRKAGATMSVSAREFSDQPCASSVRSGMVRAARGLLSAVTRLLILADMVDVHLLLSKLTAVEQDLDKLKAASSQSEVVELARQFGHSAAQLSAAAGKRQNELKEPRMKDELAAARAVLKKHSTMLLTASKVYVRHPELAAAKANRDYVLRQVCCAVDTIASVAKGQPLPDGSSRATDGPGELAQALDDFDERMVMEPLQYSELRTRPSLEERLESIISGAALMADSSCTRDERRERIVAECNAVRQALQDLLHEYMANAGKKEQSSGLERAIESMCRKTRDLRRQLRKAVVDHVSDSFLETNVPLLVLMEAARNGNEKEVEEYALVFTEHANKLVEVANLVCSMSNNEDGVKMVRHAADHIEALCPQVVNAARVLAARARSRVAQDNAAAFAHAWERAVRLLTEAVDDITTIDDFLAVSENHILEDVNKCVVALQEGDPDSLERTAGAIRGRAARVCSVVTQEMDNYEPCIYTKRVLEAVTVLRDQVMSKFAVRVDAAVSALGGGAGGALDENDFIDASRLVYDAVREIRRAVLMNRDEEDLDPEDVDLDEQYTLETRSKSSAHTGEHGVDEYPDISGITNAREAMRKMTEEDKRKILQQVELFRREKMSFDNEVAKWDDAGNDIIMLAKHMCMIMLEMTDFTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKQDLLAYLQRIALYCHQIQITSKVKADVQNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVASTKYTRQGTIASPIVVWRMKAPEKKPLIRPEKPEEVRAKVRRGSQKKQPSPIHALAEFQSPADSV

Subunit

Interacts with arm/armadillo protein.

Similarity

Belongs to the vinculin/alpha-catenin family.

Keywords

Cell adhesion   Cell junction   Cell membrane   Complete proteome   Cytoplasm   Cytoskeleton   Membrane   Phosphoprotein   Reference proteome  

Feature

chain  Catenin alpha

Uniprot

A0A154PSU3   E2BNE0   A0A1Y1M933   A0A0L7QYN9   D6W7Z8   A0A2A3EQT0   + More
A0A0N0BK99   A0A0C9PXH0   A0A067RNY4   A0A088AF89   V5G0M7   A0A2J7QK04   A0A146M5K8   A0A0K8TL21   A0A2S2P7R1   E2A263   A0A310SE52   A0A2H8TVF0   A0A026WRF8   E9IWR8   A0A151ITP3   F4WEB4   A0A195BEI2   A0A195FG27   A0A158NAY0   J9JPT1   A0A151WEL2   A0A0V0G6D8   B4K4F0   A0A2M4CSZ0   B4NBP5   A0A2M4A4A6   A0A069DWT0   A0A340TB28   A0A182PMX0   A0A2M3ZGJ1   Q7QDI9   A0A182LSP7   A0A1Q3G3T7   A0A0M3QX69   A0A224X6P4   Q0IFZ8   A0A1S4F5K6   A0A1Q3G3X6   I1WYI4   A0A1Q3G3T6   B4PJ70   B4IKT7   B3NEI7   A0A0J9S075   P35220   B4JHC8   A0A0P4VS00   A0A1Y9GGH7   A0A084VXR4   E0VUH6   A0A182R819   A0A182VMG6   A0A182Y4H4   A0A1S4GIK3   A0A182JYN6   A0A182KX03   A0A3B0K2B5   A0A2M4A432   W5JD52   A0A2M3ZGC3   A0A182F8M6   A0A2M4BCV3   Q0IFZ9   A0A1I8Q7Z8   A0A1S4F5M5   A0A1Q3G3U4   B3MX02   A0A1A9WLH2   B4MC86   A0A182NKV8   A0A182HC26   A0A023EWL7   A0A182HJS8   A0A2M4BCU1   A0A023F4X7   A0A1Q3G3V8   A0A1D2M9N9   A0A336MMC9   A0A1Q3G3T3   A0A336MHW0   A0A1I8MPM0   A0A1A9YCL4   A0A1B0AQN1   A0A226F3B0   A0A2M4CRK1   A0A2M3Z2A8   A0A1A9ZWG9   A0A1A9V552   A0A1Q3G3U3   A0A1Q3G3V1   A0A0N8B6H7   A0A2M4BD38   A0A0P5KVL7   T1JG57  

Pubmed

20798317    28004739    18362917    19820115    24845553    26823975    + More
26369729    24508170    30249741    21282665    21719571    21347285    17994087    26334808    12364791    14747013    17210077    17510324    17550304    22936249    8501118    10731132    12537572    12537569    18327897    25653389    25739458    27129103    24438588    20566863    25244985    20966253    20920257    23761445    26483478    24945155    25474469    27289101    25315136   

EMBL

KQ435180    KZC14986.1    GL449414    EFN82719.1    GEZM01037414    JAV82071.1    + More
KQ414688    KOC63693.1    KQ971307    EFA11021.1    KZ288199    PBC33622.1    KQ435706    KOX80288.1    GBYB01006193    JAG75960.1    KK852510    KDR22325.1    GALX01004906    JAB63560.1    NEVH01013547    PNF28914.1    GDHC01004064    JAQ14565.1    GDAI01002564    JAI15039.1    GGMR01012880    MBY25499.1    GL435922    EFN72468.1    KQ767877    OAD53266.1    GFXV01006411    MBW18216.1    KK107119    QOIP01000009    EZA58563.1    RLU18299.1    GL766597    EFZ14982.1    KQ981001    KYN10428.1    GL888102    EGI67552.1    KQ976509    KYM82619.1    KQ981606    KYN39645.1    ADTU01000159    ADTU01000160    ABLF02036122    KQ983238    KYQ46319.1    GECL01002563    JAP03561.1    CH933806    EDW13902.1    GGFL01004286    MBW68464.1    CH964232    EDW81209.1    GGFK01002264    MBW35585.1    GBGD01000381    JAC88508.1    GGFM01006852    MBW27603.1    AAAB01008851    EAA07275.4    AXCM01000080    GFDL01000578    JAV34467.1    CP012526    ALC45413.1    GFTR01008289    JAW08137.1    CH477281    EAT44925.1    GFDL01000579    JAV34466.1    BT133504    AFI71934.1    GFDL01000577    JAV34468.1    CM000159    EDW95594.1    CH480856    EDW52688.1    CH954178    EDV52822.1    CM002910    CM002912    KMY91444.1    KMZ01302.1    D13964    AE014296    AY051780    CH916369    EDV93835.1    GDKW01000741    JAI55854.1    APCN01002208    ATLV01018186    KE525221    KFB42758.1    DS235786    EEB17032.1    OUUW01000014    SPP88374.1    GGFK01002253    MBW35574.1    ADMH02001860    ETN60825.1    GGFM01006845    MBW27596.1    GGFJ01001729    MBW50870.1    EAT44926.1    GFDL01000575    JAV34470.1    CH902627    EDV33982.1    CH940657    EDW63168.1    JXUM01126286    KQ567050    KXJ69648.1    GAPW01000156    JAC13442.1    GGFJ01001718    MBW50859.1    GBBI01002166    JAC16546.1    GFDL01000564    JAV34481.1    LJIJ01002475    ODM89659.1    UFQT01001315    SSX29993.1    GFDL01000580    JAV34465.1    SSX29994.1    JXJN01001971    LNIX01000001    OXA64275.1    GGFL01003784    MBW67962.1    GGFM01001895    MBW22646.1    GFDL01000570    JAV34475.1    GFDL01000574    JAV34471.1    GDIQ01208043    JAK43682.1    GGFJ01001597    MBW50738.1    GDIQ01179942    JAK71783.1    JH432192   

Proteomes

UP000076502    UP000008237    UP000053825    UP000007266    UP000242457    UP000053105    + More
UP000027135    UP000005203    UP000235965    UP000000311    UP000053097    UP000279307    UP000078492    UP000007755    UP000078540    UP000078541    UP000005205    UP000007819    UP000075809    UP000009192    UP000007798    UP000075903    UP000075885    UP000007062    UP000075883    UP000092553    UP000008820    UP000002282    UP000001292    UP000008711    UP000000803    UP000001070    UP000075840    UP000030765    UP000009046    UP000075900    UP000076408    UP000075881    UP000075882    UP000268350    UP000000673    UP000069272    UP000095300    UP000007801    UP000091820    UP000008792    UP000075884    UP000069940    UP000249989    UP000094527    UP000095301    UP000092443    UP000092460    UP000198287    UP000092445    UP000078200   

PRIDE

I1WYI4    P35220   

Pfam

PF01044   Vinculin

Interpro

IPR001033   Alpha_catenin        + More
IPR000633   Vinculin_CS       
IPR006077   Vinculin/catenin       
IPR036723   Alpha-catenin/vinculin-like_sf       

SUPFAM

SSF47220   SSF47220       

ProteinModelPortal

A0A154PSU3   E2BNE0   A0A1Y1M933   A0A0L7QYN9   D6W7Z8   A0A2A3EQT0   + More
A0A0N0BK99   A0A0C9PXH0   A0A067RNY4   A0A088AF89   V5G0M7   A0A2J7QK04   A0A146M5K8   A0A0K8TL21   A0A2S2P7R1   E2A263   A0A310SE52   A0A2H8TVF0   A0A026WRF8   E9IWR8   A0A151ITP3   F4WEB4   A0A195BEI2   A0A195FG27   A0A158NAY0   J9JPT1   A0A151WEL2   A0A0V0G6D8   B4K4F0   A0A2M4CSZ0   B4NBP5   A0A2M4A4A6   A0A069DWT0   A0A340TB28   A0A182PMX0   A0A2M3ZGJ1   Q7QDI9   A0A182LSP7   A0A1Q3G3T7   A0A0M3QX69   A0A224X6P4   Q0IFZ8   A0A1S4F5K6   A0A1Q3G3X6   I1WYI4   A0A1Q3G3T6   B4PJ70   B4IKT7   B3NEI7   A0A0J9S075   P35220   B4JHC8   A0A0P4VS00   A0A1Y9GGH7   A0A084VXR4   E0VUH6   A0A182R819   A0A182VMG6   A0A182Y4H4   A0A1S4GIK3   A0A182JYN6   A0A182KX03   A0A3B0K2B5   A0A2M4A432   W5JD52   A0A2M3ZGC3   A0A182F8M6   A0A2M4BCV3   Q0IFZ9   A0A1I8Q7Z8   A0A1S4F5M5   A0A1Q3G3U4   B3MX02   A0A1A9WLH2   B4MC86   A0A182NKV8   A0A182HC26   A0A023EWL7   A0A182HJS8   A0A2M4BCU1   A0A023F4X7   A0A1Q3G3V8   A0A1D2M9N9   A0A336MMC9   A0A1Q3G3T3   A0A336MHW0   A0A1I8MPM0   A0A1A9YCL4   A0A1B0AQN1   A0A226F3B0   A0A2M4CRK1   A0A2M3Z2A8   A0A1A9ZWG9   A0A1A9V552   A0A1Q3G3U3   A0A1Q3G3V1   A0A0N8B6H7   A0A2M4BD38   A0A0P5KVL7   T1JG57  

PDB

4K1N     E-value=0,     Score=2349

KEGG

101741145    K05691 catenin alpha | (RefSeq) catenin alpha

GO

GO:0007155   GO:0005198   GO:0045296   GO:0015629   GO:0051015   GO:0005913   GO:0048854   GO:0042802   GO:0003383   GO:0046664   GO:0060323   GO:0016342   GO:0034333   GO:0005914   GO:0005915   GO:0007163   GO:0005737   GO:0003779   GO:0008092   GO:0005912   GO:0007016   GO:0034332   GO:0005886   GO:0016020   GO:0016627   GO:0030145   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR18914  

Subcellular location

Cytoplasm  
Cytoskeleton  
Cell junction  
Adherens junction  
Cell membrane  

Length:

918

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18638

Exp number, first 60 AAs:

0.00012

Total prob of N-in:

0.00828

outside

1  -  918

 

 

Pi

218.776856

Theta

160.44337

Tajima's D

0.967817

CLR

0.097949

CSRT

0.650717464126794

Interpretation

Uncertain