SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06312
Pre Gene Modal
BGIBMGA011886
Annotation
PREDICTED:_peroxidase-like_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 1.14
 

Sequence

CDS
ATGGTGACCAACTACAACGTTTTCATCGCCGGAGACGTGACTTCAGTTCACGACACAGTGAACTATGTGGCTGTCACGACAGCTTGCTGCTCACCAGGTGGAGAGGCAGACCCGAGATGCCTACCGATCAGAGTGCCCGATGATGATGTGCATCTTCGTAGAAGCAACGTGAGATGTCTGAATTTGACACGTGCCATCACGTATCAGCGTCTGGGCTGTGTATCCAATAATGTGCCTGGAGAACGGATCAACACAGCAACGCCCATGCTCGATCTCTCGATCGTGTACGGCAACAACGCTATGGCTGCAGCCCGAGGAAGGCAGTACGAGGGTGGTAGACTCCGTGCTGACATATTGAAAGGCAAGGACTGGCCACCTTCAGGGTCGGCATTCTGCATCAACAACGAAGCCAATGAGACAAGATGCCACGACGCTCCGACGAACGGCGCCAATTCGCTTTTGGGCATCAACATGTTGTTCCTCTGGCTGTACCGGAACCACAATTCTATAGCCAGACGGCTTCAGACCCTGAACCGATGCTGGGACGACGATAGAATCTTCTTCACCGCTAAAGAAATCAACATAGCCATGTATTTGCAAATCCTGTACTATGAACTCATGCCTGTAGTTTTAGGAAAAGAATTTCTACTGAACAACAAAGTTATCTTTGACGTTTTGGGTCACGTCAATGACTATGACGATCGTCTAATGCCCACTGTCAGTCTGGAGTACATTATTGGAACTAGATGGTTCCACACTATACAGGAAGGGAGGCTGAGATTGTACACAAAAGAAGGGAAGATATACGATGAACAGCCAATAGTCGATTTGACTCTTCGGACTGGTGCATTACCCATTAATAATACCTTGGAGGGCGTAACCCAGGGGGCCTTCAGACAGCCGTGTGCCGACACCGATAATCTGGTAGATCCTGATGTAAGTTATACCGGTAGCTAA
Protein
MVTNYNVFIAGDVTSVHDTVNYVAVTTACCSPGGEADPRCLPIRVPDDDVHLRRSNVRCLNLTRAITYQRLGCVSNNVPGERINTATPMLDLSIVYGNNAMAAARGRQYEGGRLRADILKGKDWPPSGSAFCINNEANETRCHDAPTNGANSLLGINMLFLWLYRNHNSIARRLQTLNRCWDDDRIFFTAKEINIAMYLQILYYELMPVVLGKEFLLNNKVIFDVLGHVNDYDDRLMPTVSLEYIIGTRWFHTIQEGRLRLYTKEGKIYDEQPIVDLTLRTGALPINNTLEGVTQGAFRQPCADTDNLVDPDVSYTGS

Summary

EMBL
BABH01028746    BABH01028747    BABH01028748    RSAL01000231    RVE43837.1    KQ459837    + More
KPJ19761.1    RSAL01000844    RVE41111.1    KQ459564    KPI99614.1    ODYU01007226    SOQ49823.1    RSAL01000046    RVE50539.1    ODYU01007325    SOQ50002.1    KQ459324    KPJ01647.1    NWSH01006580    PCG63355.1    KQ460416    KPJ14922.1    NWSH01002854    PCG67434.1    KPJ01645.1    KPJ01646.1    KZ149907    PZC78257.1    AK401278    BAM17900.1    KPJ14923.1    AGBW02012596    OWR44740.1    PZC78258.1    NWSH01006414    PCG63451.1    KZ149956    PZC76461.1    NWSH01001116    PCG72533.1    PCG72532.1    BABH01013455    BABH01034743    BABH01034744    PZC76463.1    PZC76464.1    ODYU01007479    SOQ50286.1    NWSH01006200    PCG63597.1    ODYU01008556    SOQ52260.1    NWSH01001320    PCG71707.1    KJ995811    AIN39494.1    ODYU01007063    SOQ49501.1    PZC78259.1    BABH01034746    BABH01034747    ODYU01004596    SOQ44641.1    BABH01013458    BABH01013459    BABH01013460    RSAL01000083    RVE48485.1    GL447257    EFN86678.1    APGK01042097    APGK01042098    KB741002    KB631984    ENN75712.1    ERL87705.1    KQ971317    EEZ99172.1    KM384736    AIO11227.1    KQ459589    KPI97479.1    GEBQ01006041    JAT33936.1    QOIP01000004    RLU23752.1    GEDC01011809    JAS25489.1    GEDC01020121    JAS17177.1    KK107453    EZA50655.1    GECZ01023621    JAS46148.1    GL444420    EFN60907.1    RSAL01000011    RVE53586.1    KQ434938    KZC12037.1    KQ414666    KOC65001.1    NNAY01001189    OXU24803.1    KQ459896    KPJ19443.1    AXCN02001762    AAAB01008848    EAA07042.4    APCN01003535    KQ760645    OAD59676.1    AXCM01004244    KK852427    KDR24107.1    KPI97477.1    GDKW01003332    JAI53263.1    NEVH01006567    PNF37876.1    DS231994    EDS30856.1    DS232811    EDS45917.1    ATLV01000829    ATLV01000830    KE523910    KFB34770.1    ADMH02000540    ETN66032.1    ATLV01022681    KE525335    KFB47945.1    CH940652    EDW58924.2    ACPB03011632    KZ288187    PBC34719.1    JRES01000032    KNC34772.1    ADMH02001590    ETN61943.1   
Pfam
PF03098   An_peroxidase        + More
PF00075   RNase_H
PF00083   Sugar_tr
PF00651   BTB
Interpro
IPR029585   Pxd-like        + More
IPR037120   Haem_peroxidase_sf_animal       
IPR019791   Haem_peroxidase_animal       
IPR010255   Haem_peroxidase_sf       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR012337   RNaseH-like_sf       
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR016024   ARM-type_fold       
IPR000225   Armadillo       
IPR011333   SKP1/BTB/POZ_sf       
IPR011989   ARM-like       
IPR000210   BTB/POZ_dom       
SUPFAM
SSF48113   SSF48113        + More
SSF53098   SSF53098       
SSF103473   SSF103473       
SSF48371   SSF48371       
SSF54695   SSF54695       
Gene 3D
PDB
3R5Q     E-value=3.92738e-10,     Score=154

Ontologies

Topology

Length:
318
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.696089999999999
Exp number, first 60 AAs:
0.0086
Total prob of N-in:
0.05019
outside
1  -  318
 
 

Population Genetic Test Statistics

Pi
138.681091
Theta
162.622319
Tajima's D
-1.074726
CLR
1.795182
CSRT
0.125193740312984
Interpretation
Uncertain
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