SGID The Silkworm Genome Information Database
Gene
KWMTBOMO06311
Pre Gene Modal
BGIBMGA014348
Annotation
ribonuclease_E_[Moritella_viscosa]
Location in the cell
Mitochondrial   Reliability : 1.207 Nuclear   Reliability : 1.606
 

Sequence

CDS
ATGAATTGTAAAGTTGCTCTATTCCTGATAGTGGCTATTGTAGCCGTCCAGGCTCTGCCTTGCCAGGAATCTAGACCGAGACGCTGCGGGTACAGGTATGGCTGCGGAGGCGGTCGAGGCAGGGGCTCTGGTGTGAGACGTCTCGATTCAGGAGCAGATGACAACCAAGGGCGATCATGTCTCGTCGGTGGAACAGCAGCTTCGATGAGCAAAGTTCTAGCGCTAGACAAAGCAGTAGCTCGTACCAGAGCCAGTCATACAACAAAGATTCTTCAAGTACCAATGAAAGCAGTGATGGAGGCTCTGGTTCGGGCAGAACCGGTTCAGCAGGAGAAAATGGTGAGAATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAATCTTCCAGCAGTTCTCAAGGTCAAAGCGCAAGTAGTAGCAGCAGTGATGAAAAATCATCTCAGAGCAGCAGTAATAGTAGCAACAACAGTAAATCAAGCAGCCAATCTTCCAGTAGCCAAAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAACCGGTTCAGCGGGAGGAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTCAAAGCGCAAGCAGTAGCAGCAGTGACGAAAACTCATCTCAGAGCAGCAGTAATAGTAGCAACAACAGTAAATCAAGCAGCCAATCTTCCAGTGGCCAAAACAGTTCTGGTTCTAAGGGCTCGGGATCCGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAAACGGTTCAGTGGGAGGAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAATCTTCCAGCAGCTCTCAAGGTCAAAGCGCAAGCAGTAGCAGCAGTGATGAAAAATCATCTCAGAGCAGCAGTAATAGTAGCAACAACAGTAAATCAAGCAGCCAATCTTCCAGTGGCCAAAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAAACGGTTCAGCGGGAGGAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTCAAAGCGCAAGCAGTAGCAGCAGTGATGAAAAATCATCTCAGAGCAGCAGTAATAGTAGCAACAACAGTAAATCAAGCAGCCAATCTTCCAGTGGCCAAAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAAACGGTTCAGCGGGAGGAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTCAAAGCGCAAGCAGTAGCAGCAGTGACGAAAAATCATCTCAGAGCAGCAGTAATAGTAGCAACAACAGTAAATCAAGCAGCCAATCTTCCAGTGGCCAAAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAACCGGTTCAGCGGGAGAAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTAAAAGTGCAAGCAGTAGCAGCAGTGACGAAAAATCATCTCAGAGTAGCAGTAATAGTAGTAACAACAGTAAATCAAGCAGTCAATCTTCGAGTAGCAACAATAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAACCGGTTCAGCGGGAGGAAGTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGCTCTCAAGGTCAAAGCGCAAGCAGTAGCAGCAGTGACGAAAAATCATCACAGAGCAACAGTAATAGTAGCAATAACAGTAAATCAAGTAGCCAATCTTCGAGTAGCAACAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAACCGGTTCAGCGGGAGGAACTGATGAGGATTCCGATGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTAAAAGCGCAAGCAGTAGCAGCAGTGACGAAAAATCATCTCAGAGCAGCAGTAATAGTAGTAATAACAGTAAATCAAGCAGCCAATCGTCCAGTAGCAAGAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAACCGGTTCAGCGGGAGGAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTAAAAGCGCAAGCAGTAGCAGCAGTGACGAAAAATCATCTCAGAGTAACAGTAATAGTAGTAACAACAGTAAATCAAGCAGTCAATCTTCGAGTAGTAAGAACAGTTCTGGTTCTAAGGGCTCGGGATCAGAAGAAAGCAGTAATGGAGGCTCTGGTTCGGGAAGAACCGGTTCAGCGGGAGGAACTGATGAGGATTCCGACGACAGCAGTGGTGCGACAAAAGGAAATAGCAGTAAGTCTTCCAGCAGTTCTCAAGGTAAAAGCGCAAGCAGTAGCAGCAGTAACGAAAAATCATCTCAGAGTAGCAGTAATAGTAGTAACAACAGTAAATCAAGCAGTCAATCTTCGAGTAGCAAGAACAGTTCTGGTTCTAAGGGCTCTGGATCAAGTGAAAGTGGTGATAAAAAGTCCAGTTCTCGAGGAAGTTCTGGTGACAACTCAGACGATGACCAAACTGATTCAGCCAGATCAAATAGTAAGCGTTCCACAAGCTCTGATGCGTCCACTAAAAAAAGTTCGTCTAGAAAGAGCTCCAACCACCGTAGTAGCAGAAGTCAGCAAGCTCATAGTAGCAGCAGTAAACAAGCCCAAAGCAGCAGTAGTCAACAAGCCCAAAATAGCAGAAGTCAGCAAGCTCATAGTAGCAGAAGTCAGCAAGCTCATAGTAGCAGCAGTAAACAAGCCCAAAGCAGCAGTAGTAAACAAGCCCAAAGTAGCAGCAGTAAACAAGCCCAAAGCAGCAGTAGTAAACAAGCCCAAAGTAGCAGTAGTCAACAAGCCCAAAGTAGCAGAAGTCAGCAAGCTCATAGTAGCAGAAGTCAGCAAGCTCATAGTAGCAGCAGTAAACAAGCCCAAAGCAGCAGTAGTAAACAAGCCCAAAGTAGCAGCAGTAAACAAGCCCAAAGCAGCAGTAGTAAACAAGCCCAAAGCAGCAGTAGTCAACAAGCCCAAAGTAGCAGAAGTCAGCAAGCTCATAGTAGCAGAAGTGAGACAGATAGTAAGAGCAGTAATAGTGGTGGCCATTCTAATCATAGCAGTAGAACTGAACAAAAGAGCAGCGCAAAAGCAATTTCAAGCAGTGAACAGTCACAGAATTTCTCAAGCAGTTCACAGAAATCTGCCGAGGCCGCTGATGGATCTGAAAGCACCCAGTCAGCAAGTGAATACTCGAGCAGCCAATCAAAGGCCAGTAGCAGTTTTAGCGCTTCGAGTGCCAGTGAAAGTTCTTCATTAA
Protein
MNCKVALFLIVAIVAVQALPCQESRPRRCGYRYGCGGGRGRGSGVRRLDSGADDNQGRSCLVGGTAASMSKVLALDKAVARTRASHTTKILQVPMKAVMEALVRAEPVQQEKMVRIPTTAVVRQKEIAVNLPAVLKVKAQVVAAVMKNHLRAAVIVATTVNQAANLPVAKTVLVLRARDQKKAVMEALVREEPVQREELMRIPTTAVVRQKEIAVSLPAVLKVKAQAVAAVTKTHLRAAVIVATTVNQAANLPVAKTVLVLRARDPKKAVMEALVREETVQWEELMRIPTTAVVRQKEIAVNLPAALKVKAQAVAAVMKNHLRAAVIVATTVNQAANLPVAKTVLVLRARDQKKAVMEALVREETVQREELMRIPTTAVVRQKEIAVSLPAVLKVKAQAVAAVMKNHLRAAVIVATTVNQAANLPVAKTVLVLRARDQKKAVMEALVREETVQREELMRIPTTAVVRQKEIAVSLPAVLKVKAQAVAAVTKNHLRAAVIVATTVNQAANLPVAKTVLVLRARDQKKAVMEALVREEPVQREKLMRIPTTAVVRQKEIAVSLPAVLKVKVQAVAAVTKNHLRVAVIVVTTVNQAVNLRVATIVLVLRARDQKKAVMEALVREEPVQREEVMRIPTTAVVRQKEIAVSLPAALKVKAQAVAAVTKNHHRATVIVAITVNQVANLRVATTVLVLRARDQKKAVMEALVREEPVQREELMRIPMTAVVRQKEIAVSLPAVLKVKAQAVAAVTKNHLRAAVIVVITVNQAANRPVARTVLVLRARDQKKAVMEALVREEPVQREELMRIPTTAVVRQKEIAVSLPAVLKVKAQAVAAVTKNHLRVTVIVVTTVNQAVNLRVVRTVLVLRARDQKKAVMEALVREEPVQREELMRIPTTAVVRQKEIAVSLPAVLKVKAQAVAAVTKNHLRVAVIVVTTVNQAVNLRVARTVLVLRALDQVKVVIKSPVLEEVLVTTQTMTKLIQPDQIVSVPQALMRPLKKVRLERAPTTVVAEVSKLIVAAVNKPKAAVVNKPKIAEVSKLIVAEVSKLIVAAVNKPKAAVVNKPKVAAVNKPKAAVVNKPKVAVVNKPKVAEVSKLIVAEVSKLIVAAVNKPKAAVVNKPKVAAVNKPKAAVVNKPKAAVVNKPKVAEVSKLIVAEVRQIVRAVIVVAILIIAVELNKRAAQKQFQAVNSHRISQAVHRNLPRPLMDLKAPSQQVNTRAANQRPVAVLALRVPVKVLH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998526
 
 
Length:
1235
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.47584
Exp number, first 60 AAs:
3.31194
Total prob of N-in:
0.19166
outside
1  -  1235
 
 

Population Genetic Test Statistics

Pi
272.242334
Theta
191.088995
Tajima's D
0.973303
CLR
0.116604
CSRT
0.653017349132543
Interpretation
Uncertain
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