Silkworm Genome Informatics Database

Gene

KWMTBOMO06301

Pre Gene Modal

BGIBMGA001832

Annotation

Transposon_Tf2-8_polyprotein_[Thelohanellus_kitauei]

Location

Bomo_Chr11(+):4330292-4343896 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.007

CDS

ATGGATAAATACAATCCAGATACATTCAGAATTGACGATTACATTGATTTTTTCGAAAACAAATGCAAAATTCTTGATATCGATAACAGCGACTTACAGAAAGATTTGCTTCTGAATTTACTAACACCAGAGATATTTCACGAATTAAAAGTAGCTTTAACGCCTGATTTCGATATAGCTACATACAGCGAAATTTGTAACAAATTATTAGACCTCTATCGCATAAAAACGACGAGGTATAGAGCCTTAACAGAATTTTGGAATTGCACTAGAGAACAAAATGAAACGATGGAACACTATGCAAACAGATTAAAAGGTCTTAGTCGGGATTGTGGCTACACTAATGACTTCCTGGAACGACAATTACGTGACCGCTTTGCCACTGGATTGAATCATCCAGATTTAGAAACCGACTTGAAACAAAAATGGCCTGATTTAGTTCAAATGGTAGACGGAATACCAAGAGAAGTAACCTTCCAACAAATTTTTACAATCTCTCAATCAAGAGAACAAGCAGAACAAGACACACCACGAACAAGTATTAAAAAAATAACAAGACCTCATAAGTCCTCAACATCATCATCATCATTTATCAGTAATAACGAGGAAGAAAGCGATGATGAAGTTATCTGCAGCGTCTTGGGTACACGTAAGAGAGAATGCAAACAAATCGATGTACGGATCAATGGCATACCTTGCACTATGGATTGGGACCCCGGCTCTGCGTATTCAATAATAAACACGACATTGTGGAAAAAATTAGGATCACCATCTTTACAACCCGCCCCGAAACTTAAGGCCTACGGCAACACAAACTTAAAAACAAAGGGAATTACAAAAGTGACAGTCGAAGTCGACGGACTGCAAAAACTTCTACCTGTGGTCGTAATGAAAAATGCCAAACCAATGTTATTTGGTTTACATTGGAGTGAAGTTTTTGAAATGGAATTTCCAAAACCAGTATACTCCATCAAAACATCAATACCGATTACTCTTAAACAAATACTGGATAAACATTCACAACTCTTTGATGGAAAACTAGGAAAAGTTAACAATTATTACGTAAACATACATGTCAAACCAGAAGCTGAACCGATCCACCTTCCTGCACGGCCTATAAAATTCAGCATGAAAAAGAATATAGAAAGGGAGATAGATCGTCTGATCTCAGAAGGGATAGTGGAAAAAGTAGATCCTAATATTACACCTATTGAATGGGCTACACCCACAGTTAACATTCTGAAATCTACAGGGGAAGTTAGGATATGTGGAGACTACAGAACTACACTTAATCCAGTACTTATTAAACATCTACACCCAGTTCCAATTTTCGATCAACTACGCCAAAATCTCGCAAACGGTAAATTATTTTCAAAAATAGACCTTAAAGACGCATACTTACAATTTGAAATAGCACCGGATTCGAAAAAGTACTTGACGTTGTCAACACATAAAGGGTATTTCCAATACAATAGAATGCCTTTTGGAATATCGACTGCTCCTTCAATTTTCCAACATTTTCTGGATCAACTGCTAGGCGATATCACCAATGTAGCTGTATATTTTGACGACATAGCTATAGCAGGGAAAGATCTTTCAGAACATTTACAAACTTTATCTATTGTATTCGATCGCTTACAAAACGCTGGCCTAAAAGTTAATTTAAAGAAATGTAATTTCTTACAGAATCAGATTGAATACCTAGGTCACATAATAGATAAACATGGCATCCACCCAACCAAATCTAAAATTGATGCCATAACTAAGGCTCCAGCACCGTGTAATGCAAAAGAACTACGATCATTTTTAGGACTAGTTAATTTTTACGAACGGTTTGTATCACACCTTCACGGGATTTGTTCGGATCTTCACGATCTAACTAGTGAAAAAAATAGATGGCGTTGGACTGATCATGAAAACAGAATATTTGAAGATACAAAGAAATGCATAACTTCTTCACAACCATTAATTGCATTTGACGAGAAACGTCCCCTTTATTTAGCATGTGACGCTTCCGAAAAGGGATTGGGTGCAGTATTATTCCACAAGGACTCGAACATAGAACAACCAATTGCTTTTGCTTCAAGGAAACTACGTCCAGCGGAAATGAAATATTCCGTTATTGATCGTGAAGCTTTAGCAATAGTATTTGGTATAAAAAAATTTGATCAGTACTTGAGAGGAACGAAATTTAATCTAGTTACGGACCATAAGCCTCTTATACATATTATGGGTGCACACCGCAACCTTCCTAAACTAGCCAATAACCGATTGGTAAGATGGGCCCTAGTAGTGGGAAGTTATCAATATGATATTTACTACAGGAAAGGTGAAAATAACACATTAGCTGATTGCCTTTCCAGATTACCAAACCCTGAAACTGAACCCTCCGAGACAGAAGGGCTTGTACATAAAATAGATCTACGTCTTTTGAGCACTCGAATGACTGACCTTAATCTATCAGAACAGTTACTTATGAAAACAACTTCAAAGGATCATATACTCACAAAAGTTTGTCAAAATTTAAAAACCGGCTGGAGAGAATCAGATTACAATCCAGAAATGAAACCATTCTACAGAAACCGGACTGAATTATCTGTTGAGAATAAGATACTTATGAGGCAAGGACGCATCGTTATACCTACAGCACTCCGAAAAGCCATTCTTACATACCTTCATCGAGGACATCCTGGCATTTCTGCTATGAAAGCACTTTCACGTTACTATGTTTGGTGGCCTAACCTTGACGAAGACATAGAATTATTTGTCAAGAAATGTACCAGATGCCAACAGAACCGCCCTTGTAATCCTGAACTTCCTGTATTTTCCTGGTCCATACCAGAAGAGGTATGGGAGAGAATCCATATCGACTTTGCTGGACCGTTCGAAGGATCGTATTGGTTGGTATTGTGCGACGCTCTCTCCAAATGGGTGGAAATACGATCGATGAAACACATCAACACCAGATCACTTTGTCTTACATTAGATAACATATTTTGTACATTTGGCTTACCAAAAATGATTATATCCGATAATGGACCTCAATTTACATCTTATGAATTTAAAGAATATTGCACAAAACAATCTATTTTACATGTCACATCATCTCCATATCATCCTCGAACAAATGGGCTGGCAGAACGTTTAGTCAGAACATTCAAAAATAGAATGGCATCGGTAGACAACACAAATCTCGAGCGCCGACTATTAGAATTTTTGTTTACATACAGAAACACTCCGCACTCGTCCACTGGTAAATCTCCAGCTGAGATGATGTTTGGACGACAATTGAATTGCATACTTTCCAACATTCGGCCAGACAAAAGAAGATTAATGCAGTATTTACAAGTAAAAGAAAACATTCGTACCACATCACCGAGTTACCGACCAAGTGACCAAGTATATATTAAAACACGCAATGATAAAATATGGGAACCAGCGGTAATTACATCCCGTAAACATAAATATTCATATATTGTTTCAACACCAGGAGGACTAGAAAAACGAAGACACGCTGATCACATCAGGCCACGCGAGTCCTCCACCTCAGAAACCCCGAGGAATGAAAGGGCGCATTCTTCTATGCTGCCGGCGACTGCTTCTCCAGACATTGGAATGGACACAACAATTGACGAAAGGCTAACTAAAAACAAGAATTCGGCAGCAGTACCATTACCTACACCGCAGTCACCTACAAATGTACAAATTTCTCCAAATTCACCTTCACAGCATTCGAAGTTATACTCCTCACCTGCTCCGGTCTCCACTCCTGTGCCATTTGCTCCGCGTCGAAGAAACGAAATAGTAACTATGGTGGAGCCATCAATTTACAAGTTTACCACAGCTGAAGGGGGTGCTCGTCTCGCTGCAATTGCATCTGAACGTAACACCCTTGCTGTGGAATACTCAAATTTCATTGCAACCAGGCTGGTCTATGAAGAAGCTTATAAGATACGAGGGTCGCTCTATGATAATAAGCAGAGATCAGTGCACGTGACAAGAGAGGATCGTATAAAATGCACCGCCTACGATCTGAGGATTATGACCGACTTGTCGTTGTGTGAGGCTGAGAAATACGATGATGTGTATGATTGGTACGCGGAACTTGATAAGAAAGAAGTTTTGGTCTGCACTTCAGTAGTTTTAAAACGAATTCTAGAAGAGGGAATAATATCAATGGCGAATATTAATGTTCTAATAATTGATAGCTGTCATTTAATAGTGACCGACGAGAATTTGAAATATATTATGCAAGTTTACAAAGATAGCGAAGAATCAAAAAGACCCCGAATACTTTCGTTGACATATCCTCTCTTTGGATCGCACAAAAAATCTGAAGACATTCATAATGACAAACAGGCAGATAACTCTGAGGATTCAAACAAAAGAGACTCATGTAATTTGAAAGATATGCTGATAGAAGAAGATAAACATGATAATGAAAGGTCAGAAAAAGATATGAGACACTCTCAAACTGATTCACCGAATGAAATTACTTGCGACAGTGACATTGGATCTTTGAAAGATACAAAAACAGACCTAGAACAGGATATAGTTGCTGAAGATAAATCATTAGAGAGCGAAAATATCGATGATTTCGATATGTATGAGAAGTTGGAGTGGAAAATTGAGCAACTGGAGAATGAGTTGTGCTGTAAAATGGATCTTGCTGAAGACATCGACACAGGGAAAAGAACAGCGGCGGCATCCACCAAACCAAATGAGCTGATAGTCGAATACTGTCCTCGGAGACCTGATAGCGAGCTCTCAGAGGATTACTTGGAGCTGGAGAGCTACATGAAGAGGACCGTTGAAGACGTCGCGGAGTTTGTTAATGATCACAGACACGATCCCACCGAGATATACGGAGACGAGCTGTACGAGGAGTTCAAGAACATTCCGGACCCGACGAACGAACCCAAAATGATGTTCAAACAGTTCTTACATGTTCTAGAAGAACTGGGTCCTTACGCAGCCGACAAAGCGGCCTTTTCGATATTAACGAAATTAGAGAAGTTAAAAATTAAAGTGCCGTACGAACGACATTTCCTCTTGTTGTGCCTCTGCACGACCGTGTTCGTCAGGATACGATGTTACGCGGACCTCGTGTTCGGGAAGCTGGAGTCGGACTGGGACCGAATCCGGGCCTTCTCGACGCCGAAAATACTGAGGTTGGCCGAAATATTAGAGAGGTTTCGGCCGCCCGATACACCTCACGACGAAGGCAAGAGGAACGGCCTCGCTCAAAACGAAGCCGCCGCCAACTCGAAGGATTCGTGCGCCGAAACATCGAGTTGCATAACGGAAAGCGAAAGCTCTAGCACCATCACTAGTAATTCGAGTTTACGTACCGACAGCGGACATGTGATTCTCGAGTCTGGCAATACCGACAAAGAAAATTTTGCCAGTTTAAATAACGCAGTTAATGTAGTCGCTGACCTGTGCGGTTCTACAGAGAATGTTAAGAACGGTGACAATGGCGGGCGTCTAAATAACACAAGCCCAAATGAAACCGATAATACACAAGTGAAGACCGAGCCTGATGAAGAAAAAATCAAATCGAAAACCCTCGAATTACTGAGTGCTATAGAAAAATGTGATTTCGCGTATTTAGCCGATAGGATAGAAGATAAAGTCAACGCTTACGAAGCTAACCTGAAAGAGATAGACGTTTACATCGACAAGTGCGATAGAGACGGGGATAGCGAACCGAATGAGACCGGGGCACAGGAAGAGAGAAAGTCGTCATATTGTAACGAAAAGATCCCCCAGCCTCACCTAGATCCGCTCCAGGTCAAACCGAGTCCTCTCAGACGTTCCGGGAATCGCGTCAGAGGCAGGACCAAACTCAGGAACAACGCCAATCGAACCCAAAACACGGGACAGAATCCTGACGCCCTGTGTGGCGTTTTATTCGTCAAGGAACCGCTTATGGCCAAAATTCTCTTCATGATTATCGCGGACCTGTCCCGTTGTCATCCGAAGTTATCGTACGTGTGCGCCCAGTACTGTGCAGTAGAGAACCCTGAAGAGTCCCTAGAGCCCAGAGAGTGCCAGCGACAGAATAAGAAACACGAAGATGTTCTCAAGAAGTTCCGGATGCACGAGTGCAACCTGCTGCTGGCCACGGCGGCGCTGGAGGAGGGCATCGACCTGCCGCGCTGCAACCTCGTGCTGAGATGGGACGCGCCGCCCTCGTCAGTATACTTCTGTTTCTGCTCCGCTTTGATGTGA

Protein

MDKYNPDTFRIDDYIDFFENKCKILDIDNSDLQKDLLLNLLTPEIFHELKVALTPDFDIATYSEICNKLLDLYRIKTTRYRALTEFWNCTREQNETMEHYANRLKGLSRDCGYTNDFLERQLRDRFATGLNHPDLETDLKQKWPDLVQMVDGIPREVTFQQIFTISQSREQAEQDTPRTSIKKITRPHKSSTSSSSFISNNEEESDDEVICSVLGTRKRECKQIDVRINGIPCTMDWDPGSAYSIINTTLWKKLGSPSLQPAPKLKAYGNTNLKTKGITKVTVEVDGLQKLLPVVVMKNAKPMLFGLHWSEVFEMEFPKPVYSIKTSIPITLKQILDKHSQLFDGKLGKVNNYYVNIHVKPEAEPIHLPARPIKFSMKKNIEREIDRLISEGIVEKVDPNITPIEWATPTVNILKSTGEVRICGDYRTTLNPVLIKHLHPVPIFDQLRQNLANGKLFSKIDLKDAYLQFEIAPDSKKYLTLSTHKGYFQYNRMPFGISTAPSIFQHFLDQLLGDITNVAVYFDDIAIAGKDLSEHLQTLSIVFDRLQNAGLKVNLKKCNFLQNQIEYLGHIIDKHGIHPTKSKIDAITKAPAPCNAKELRSFLGLVNFYERFVSHLHGICSDLHDLTSEKNRWRWTDHENRIFEDTKKCITSSQPLIAFDEKRPLYLACDASEKGLGAVLFHKDSNIEQPIAFASRKLRPAEMKYSVIDREALAIVFGIKKFDQYLRGTKFNLVTDHKPLIHIMGAHRNLPKLANNRLVRWALVVGSYQYDIYYRKGENNTLADCLSRLPNPETEPSETEGLVHKIDLRLLSTRMTDLNLSEQLLMKTTSKDHILTKVCQNLKTGWRESDYNPEMKPFYRNRTELSVENKILMRQGRIVIPTALRKAILTYLHRGHPGISAMKALSRYYVWWPNLDEDIELFVKKCTRCQQNRPCNPELPVFSWSIPEEVWERIHIDFAGPFEGSYWLVLCDALSKWVEIRSMKHINTRSLCLTLDNIFCTFGLPKMIISDNGPQFTSYEFKEYCTKQSILHVTSSPYHPRTNGLAERLVRTFKNRMASVDNTNLERRLLEFLFTYRNTPHSSTGKSPAEMMFGRQLNCILSNIRPDKRRLMQYLQVKENIRTTSPSYRPSDQVYIKTRNDKIWEPAVITSRKHKYSYIVSTPGGLEKRRHADHIRPRESSTSETPRNERAHSSMLPATASPDIGMDTTIDERLTKNKNSAAVPLPTPQSPTNVQISPNSPSQHSKLYSSPAPVSTPVPFAPRRRNEIVTMVEPSIYKFTTAEGGARLAAIASERNTLAVEYSNFIATRLVYEEAYKIRGSLYDNKQRSVHVTREDRIKCTAYDLRIMTDLSLCEAEKYDDVYDWYAELDKKEVLVCTSVVLKRILEEGIISMANINVLIIDSCHLIVTDENLKYIMQVYKDSEESKRPRILSLTYPLFGSHKKSEDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLKDTKTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENELCCKMDLAEDIDTGKRTAAASTKPNELIVEYCPRRPDSELSEDYLELESYMKRTVEDVAEFVNDHRHDPTEIYGDELYEEFKNIPDPTNEPKMMFKQFLHVLEELGPYAADKAAFSILTKLEKLKIKVPYERHFLLLCLCTTVFVRIRCYADLVFGKLESDWDRIRAFSTPKILRLAEILERFRPPDTPHDEGKRNGLAQNEAAANSKDSCAETSSCITESESSSTITSNSSLRTDSGHVILESGNTDKENFASLNNAVNVVADLCGSTENVKNGDNGGRLNNTSPNETDNTQVKTEPDEEKIKSKTLELLSAIEKCDFAYLADRIEDKVNAYEANLKEIDVYIDKCDRDGDSEPNETGAQEERKSSYCNEKIPQPHLDPLQVKPSPLRRSGNRVRGRTKLRNNANRTQNTGQNPDALCGVLFVKEPLMAKILFMIIADLSRCHPKLSYVCAQYCAVENPEESLEPRECQRQNKKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWDAPPSSVYFCFCSALM

Uniprot

NA

ProteinModelPortal

NA

PDB

4OL8 E-value=2.23756e-53, Score=535

KEGG

105842438 no KO assigned | (RefSeq) uncharacterized protein K02A2.6-like

GO

GO:0015074 GO:0003676 GO:0009312 GO:0016021 GO:0008235 GO:0019538 GO:0030145 GO:0015923 GO:0005634 GO:0006260

Length:

2077

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01053

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.00003

outside

1 - 2077

Pi

27.418248

Theta

195.02596

Tajima's D

0.64593

CLR

0.652923

CSRT

0.55837208139593

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree