Gene

KWMTBOMO06297

Pre Gene Modal

BGIBMGA001609

Annotation

UDP-N-acetylhexosamine_pyrophosphorylase-like_protein_1_[Bombyx_mori]

Location

Bomo_Chr11(-):4247658-4249241      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 4.079

CDS

ATGTATGAAACATTATTACGAAACCTAAAAGATCATGGTCAAGAACACTTAATTAAATACTGGTCGGTATTAAGTGAGGAACAGCGGAAACAGCTGTCGGACGAAATTCTAAAACTTGACTTGACGGAAGTGCATGCAACATTTTCGCGGGCAATTGAATCTACGAAAAAAATATTAGAAAAATTAGACGACGACTTGAAACCAATACCGGATAGTCACTATGAGTCTGTACCGAACTTGACGCCCGATAAGATTGAAGAATACGAAAATATCGGATTTAAAGAAATATGCAATGGGAAAGTTGGTGTGCTCTTGTTAGCTGGAGGTCAGGCGACGCGGCTCGGTTTCGGCCACCCTAAGGGAATGTACGATGTGGGATTGCCATCAAGAAAAACCTTGTTCCAGATACAAGCCGAGAGGATCCTGCGAGTTCAGCAGATGGCTGCCGAAAAATATGGAAACGAAGGTAAAATAACATGGTATATTATGACTTCTGAACACACGAAAGCCCCTACTGCAAATTATTTCAAAAGTCACTCATACTTTGGTTTGAATGAAAACGATGTGGTTTTCTTTGAGCAAGGCACATTACCTTGCTTTGATTTTGAAGGGAAAATATTCTTGGATGAGAAATATCATTTGTCTGCTGCCCCTGATGGTAATGGAGGTCTGTATCGAGCATTAAAAACCCAGGGAATATTGGACGATATCTCAGTAAGAGGAATCCAACATCTTCATGCTCATTCAGTTGACAACATACTTATAAAGGTTGCAGATCCGGTATTTATTGGTTACTGTAAATCTAAAAATGCTGATTGTGCTGCAAAAGTCGTTCAGAAATCTAGTCCCAGTGAGCCTGTTGGTGTCGTCTGCAGAGTGAATGGACACTACAAGGTAGTGGAGTACTCCGAACTCACAGACGAGGCATCTGAAAGACGTAATCCTGATGGTCGTCTCACATTCTCAGCAGGAAACATCTGTAATCATTATTTTTCAGCTGATTTCTTAAGAAAAATATCAAACTTTGAGACAAAGCTAAAATTGCATATAGCCAAAAAGAAAATACCGTATATAGATGAGAATGGTGTGCGGCAGAAACCGAATGAACCAAACGGTATTAAGATGGAGAAATTTATTTTTGATGTTTTTGAGTTTGCTGAGAATTTCATTTGCTTAGAGGTGGCTCGAGACACTGAGTTTTCAGCCTTAAAGAATGCTGACACAGCCAAAAAAGACTGTCCTTCGACTGCCCGAGAAGATTTGCTTCAGCTCCATAAAAAATACATTAGACAAGCTGGTGGAGAGGTGGCAGACGATGCTGATATAGAAATCTCTCCGTTATTGTCCTACGGGGGCGAGAATTTGGACAGCATTGTTAACGGTAAAGTGTTTACCGCTGGTCCATTCCATTTGAAGAGTCCACAGGAATTATCAAGTAATGGTGTTAATGGTAATCATTGA

Protein

MYETLLRNLKDHGQEHLIKYWSVLSEEQRKQLSDEILKLDLTEVHATFSRAIESTKKILEKLDDDLKPIPDSHYESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKITWYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFLRKISNFETKLKLHIAKKKIPYIDENGVRQKPNEPNGIKMEKFIFDVFEFAENFICLEVARDTEFSALKNADTAKKDCPSTAREDLLQLHKKYIRQAGGEVADDADIEISPLLSYGGENLDSIVNGKVFTAGPFHLKSPQELSSNGVNGNH

Similarity

Belongs to the SecY/SEC61-alpha family.

Uniprot

H9IWH7   A0A089PRC4   A0A0H4K988   A0A2A4IW10   A0A0N1IJZ7   A0A194QAE1   + More
A0A2W1BGK5   C0JP36   A0A2H1VI03   A0A0L7L7Z6   A0A212F0J1   A0A336MRB9   A0A1J1J4J2   A0A336K9K8   A0A1Q3FI02   B0W7S4   T1P8W1   A0A1L8E3R0   D3TMF2   Q6GW02   A0A1A9ZFD2   A0A1S4EZH5   A0A1B0BN42   A0A182GBM6   A0A1A9XQQ5   A0A0L0C2R3   A0A0M4EBZ9   B3MVM1   B4JQ73   A0A0P8ZI38   A0A0A1XIJ4   A0A1S6J0Z1   A0A3G1NF53   B4P0D5   A0A0A1WRE5   A0A0R1DP57   A0A1A9VF40   A0A0K8TDM2   A0A2K8FTL8   A0A1A9W5I7   B4M9K1   A0A146LTB7   B4N7M5   B3N5R9   A0A0A9ZAE6   A0A1W4V246   A0A0Q9WSQ0   A0A1W4VEE5   A0A2Z4BZH2   A0A1I8PSF4   A0A0Q5WJW6   A0A1I8PSE6   A0A0J9QWZ9   T1RR64   B4I1W1   A0A0J9QWR8   A0A034VRQ3   A0A0Q9XGY8   B4KKX7   A0A0K8VFV9   Q9Y0Z0   Q8IGT8   B4GKK5   Q8IPJ6   A0A034VQ51   W8CA07   W8BGG5   A0A0K8VVU0   A0A0R3NW48   Q29PE0   U5EJU3   S4TMY9   A0A3B0K9M7   A0A2P8XQZ0   A0A023F4T7   A0A2J7PZX6   A0A2R7X5X4   A0A0V0GAR1   A0A1Y1KQ16   A0A1W7R9C3   A0A1B6MLW9   A0A023ES67   A0A067R5N0   T1IG81   A0A1B6GC03   A0A0N8ER49   A0A026WN36   A0A1B6IQT1   A0A195D9D2   A0A0N0BJE1   A0A195C6V7   A0A195ERE2   J9JW65   T1RRG3   A0A2S2PAL6   F4X1T0   A0A2S2QDB6   A0A2H8TXM0  

Pubmed

19121390    26354079    28756777    26227816    22118469    25315136    + More
20353571    17510324    26483478    26108605    17994087    18057021    25830018    27414796    17550304    26823975    25401762    22936249    23977188    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    15632085    29403074    25474469    28004739    24945155    24845553    24508170    30249741    21719571   

EMBL

BABH01021347    KM078925    AIQ85099.1    KP705074    AKO90063.1    NWSH01005743    + More
PCG63995.1    KQ459736    KPJ20218.1    KQ459463    KPJ00381.1    KZ150077    PZC73938.1    FJ380203    ACN29686.1    ODYU01002647    SOQ40426.1    JTDY01002443    KOB71416.1    AGBW02011074    OWR47250.1    UFQS01001884    UFQT01001884    SSX12648.1    SSX32091.1    CVRI01000070    CRL07311.1    UFQS01000123    UFQT01000123    SSX00065.1    SSX20445.1    GFDL01007844    JAV27201.1    DS231855    EDS38218.1    KA644575    AFP59204.1    GFDF01000825    JAV13259.1    CCAG010016184    EZ422604    ADD18880.1    AY631402    AY632694    CH477222    AAT48092.1    EAT47260.1    JXJN01017195    JXUM01053044    KQ561760    KXJ77610.1    JRES01000973    KNC26643.1    CP012523    ALC40214.1    CH902624    EDV33286.1    CH916372    EDV99053.1    KPU74384.1    KPU74385.1    GBXI01003506    JAD10786.1    KU764442    AQS60688.1    MF964941    AUX15121.1    CM000157    EDW87893.1    GBXI01012900    JAD01392.1    KRJ97474.1    GBRD01002222    JAG63599.1    KU556836    KY618822    AQT25651.1    AQW43008.1    CH940654    EDW57877.2    GDHC01007645    JAQ10984.1    CH964214    EDW80364.1    CH954177    EDV59078.1    GBHO01043421    GBHO01043420    GBHO01043418    GBHO01002733    GBHO01000227    GBHO01000225    JAG00183.1    JAG00184.1    JAG00186.1    JAG40871.1    JAG43377.1    JAG43379.1    KRF99269.1    MH119582    AWU68200.1    KQS70619.1    CM002910    KMY88523.1    JX484802    AGN56418.1    CH480820    EDW54518.1    KMY88522.1    GAKP01014754    JAC44198.1    CH933807    KRG02856.1    EDW11707.2    GDHF01014577    JAI37737.1    AF145686    AE014134    AAD38661.1    AAF52387.1    BT001608    AAN71363.1    CH479184    EDW37171.1    AAN10586.1    AHN54188.1    GAKP01014751    GAKP01014750    JAC44202.1    GAMC01006191    JAC00365.1    GAMC01006190    JAC00366.1    GDHF01009317    JAI42997.1    CH379058    KRT03421.1    EAL34353.1    GANO01002095    JAB57776.1    JX434756    AGE89783.1    OUUW01000064    SPP90063.1    PYGN01001499    PSN34428.1    GBBI01002689    JAC16023.1    NEVH01020330    PNF21887.1    KK857445    PTY27176.1    GECL01001783    JAP04341.1    GEZM01076968    JAV63502.1    GFAH01000664    JAV47725.1    GEBQ01003041    JAT36936.1    GAPW01001510    JAC12088.1    KK852869    KDR14652.1    ACPB03002356    GECZ01009804    JAS59965.1    GDIQ01002076    JAN92661.1    KK107152    QOIP01000007    EZA57056.1    RLU20461.1    GECU01018446    GECU01002970    JAS89260.1    JAT04737.1    KQ981153    KYN09009.1    KQ435716    KOX79054.1    KQ978251    KYM95903.1    KQ981993    KYN30825.1    ABLF02036121    JX484803    AGN56419.1    GGMR01013609    MBY26228.1    GL888551    EGI59587.1    GGMS01006468    MBY75671.1    GFXV01006467    MBW18272.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000183832    UP000002320    UP000095301    UP000092444    UP000008820    UP000092445    UP000092460    UP000069940    UP000249989    UP000092443    UP000037069    UP000092553    UP000007801    UP000001070    UP000002282    UP000078200    UP000091820    UP000008792    UP000007798    UP000008711    UP000192221    UP000095300    UP000001292    UP000009192    UP000000803    UP000008744    UP000001819    UP000268350    UP000245037    UP000235965    UP000027135    UP000015103    UP000053097    UP000279307    UP000078492    UP000053105    UP000078542    UP000078541    UP000007819    UP000007755   

PRIDE

H9IWH7    Q9Y0Z0    Q8IGT8    Q8IPJ6   

Pfam

PF01704   UDPGP        + More
PF10559   Plug_translocon
PF00344   SecY

Interpro

IPR029044   Nucleotide-diphossugar_trans        + More
IPR039741   UDP-sugar_pyrophosphorylase       
IPR002618   UDPGP_fam       
IPR019561   Translocon_Sec61/SecY_plug_dom       
IPR030659   SecY_CS       
IPR002208   SecY/SEC61-alpha       
IPR023201   SecY_dom_sf       

SUPFAM

SSF53448   SSF53448        + More
SSF103491   SSF103491       

Gene 3D

3.90.550.10     1.10.3370.10    

ProteinModelPortal

H9IWH7   A0A089PRC4   A0A0H4K988   A0A2A4IW10   A0A0N1IJZ7   A0A194QAE1   + More
A0A2W1BGK5   C0JP36   A0A2H1VI03   A0A0L7L7Z6   A0A212F0J1   A0A336MRB9   A0A1J1J4J2   A0A336K9K8   A0A1Q3FI02   B0W7S4   T1P8W1   A0A1L8E3R0   D3TMF2   Q6GW02   A0A1A9ZFD2   A0A1S4EZH5   A0A1B0BN42   A0A182GBM6   A0A1A9XQQ5   A0A0L0C2R3   A0A0M4EBZ9   B3MVM1   B4JQ73   A0A0P8ZI38   A0A0A1XIJ4   A0A1S6J0Z1   A0A3G1NF53   B4P0D5   A0A0A1WRE5   A0A0R1DP57   A0A1A9VF40   A0A0K8TDM2   A0A2K8FTL8   A0A1A9W5I7   B4M9K1   A0A146LTB7   B4N7M5   B3N5R9   A0A0A9ZAE6   A0A1W4V246   A0A0Q9WSQ0   A0A1W4VEE5   A0A2Z4BZH2   A0A1I8PSF4   A0A0Q5WJW6   A0A1I8PSE6   A0A0J9QWZ9   T1RR64   B4I1W1   A0A0J9QWR8   A0A034VRQ3   A0A0Q9XGY8   B4KKX7   A0A0K8VFV9   Q9Y0Z0   Q8IGT8   B4GKK5   Q8IPJ6   A0A034VQ51   W8CA07   W8BGG5   A0A0K8VVU0   A0A0R3NW48   Q29PE0   U5EJU3   S4TMY9   A0A3B0K9M7   A0A2P8XQZ0   A0A023F4T7   A0A2J7PZX6   A0A2R7X5X4   A0A0V0GAR1   A0A1Y1KQ16   A0A1W7R9C3   A0A1B6MLW9   A0A023ES67   A0A067R5N0   T1IG81   A0A1B6GC03   A0A0N8ER49   A0A026WN36   A0A1B6IQT1   A0A195D9D2   A0A0N0BJE1   A0A195C6V7   A0A195ERE2   J9JW65   T1RRG3   A0A2S2PAL6   F4X1T0   A0A2S2QDB6   A0A2H8TXM0  

PDB

1JV3     E-value=2.10874e-134,     Score=1228

KEGG

101746744    K00972 UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] | (R

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0070569   GO:0003977   GO:0016021   GO:0015031   GO:0007413   GO:1902669   GO:0007391   GO:0007417   GO:0008362   GO:0035151   GO:0001838   GO:0060050   GO:0030198   GO:0006035   GO:0007424   GO:0040003   GO:0008152   GO:0005834   GO:0007186   GO:0008270   GO:0008235   GO:0019538   GO:0030145   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR11952   PTHR10906  

Subcellular location

Membrane  

Length:

486

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00892

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00329

outside

1  -  486

 

 

Pi

230.753763

Theta

185.27127

Tajima's D

0.892467

CLR

0

CSRT

0.634818259087046

Interpretation

Uncertain